BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019042
         (998 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|2...    59   1e-08
ref|NP_191483.1| putative F-box/LRR-repeat protein [Arabidopsis ...    62   3e-07
ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|2...    51   3e-07
ref|XP_003531612.1| PREDICTED: putative F-box/FBD/LRR-repeat pro...    60   1e-06
ref|XP_002321943.1| f-box family protein [Populus trichocarpa] g...    59   2e-06

>ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|222859666|gb|EEE97213.1|
           predicted protein [Populus trichocarpa]
          Length = 420

 Score = 58.5 bits (140), Expect(2) = 1e-08
 Identities = 32/84 (38%), Positives = 50/84 (59%)
 Frame = -2

Query: 565 LSHLPEHIIHHIFSFLDMKYVIYTSMLSRKWRYLLVSFPFLSFNRHIS*LSKVC*YRLSL 386
           ++ LP+ ++ HI SFL+ K  + TS+LSRKW +L  S   L F++        C ++   
Sbjct: 40  INDLPDALLQHILSFLETKDAVRTSILSRKWEHLWKSLSNLEFHQ--------CYFKAKR 91

Query: 385 QRFIDFVHRVLFLRDNSAIQTFHL 314
           + F++ V RVL LRD+S I+ F L
Sbjct: 92  KIFMNSVERVLLLRDSSNIEKFTL 115



 Score = 27.7 bits (60), Expect(2) = 1e-08
 Identities = 27/92 (29%), Positives = 37/92 (40%), Gaps = 2/92 (2%)
 Frame = -3

Query: 327 KLSI*FGIMTTAIQVTWICVVVCRNVQELNLQFCP--VSEVFVFPDCXXXXXXXXXXXXX 154
           K ++  GI       TW+   V RNV+EL + F     SE FV P C             
Sbjct: 112 KFTLSCGIDDATRTRTWVSAAVNRNVKELCVNFYEGGESESFVSPLCLFTCATLTKLKI- 170

Query: 153 XXLDDSCQMTATLPNHISLPVLRTLHLKTLNF 58
                +      L + ISLP L+ L L+ + F
Sbjct: 171 -----TSHGVLRLSSSISLPCLKILSLQHVVF 197


>ref|NP_191483.1| putative F-box/LRR-repeat protein [Arabidopsis thaliana]
           gi|75264305|sp|Q9LX47.1|FDL46_ARATH RecName:
           Full=Putative F-box/FBD/LRR-repeat protein At3g59240
           gi|7801674|emb|CAB91594.1| putative protein [Arabidopsis
           thaliana] gi|332646374|gb|AEE79895.1| putative
           F-box/LRR-repeat protein [Arabidopsis thaliana]
          Length = 504

 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 35/86 (40%), Positives = 48/86 (55%)
 Frame = -2

Query: 571 DKLSHLPEHIIHHIFSFLDMKYVIYTSMLSRKWRYLLVSFPFLSFNRHIS*LSKVC*YRL 392
           D +S LPE +I H+ SF+  K    TS+LS KWRYL    P L F+  +   S +     
Sbjct: 8   DIISDLPEALICHLLSFVPTKEAALTSLLSEKWRYLFAFAPILDFDDSVWMQSPLVYMNE 67

Query: 391 SLQRFIDFVHRVLFLRDNSAIQTFHL 314
             ++F+DFV RVL L+ NS +  F L
Sbjct: 68  VHRKFMDFVDRVLGLQGNSTLVRFSL 93


>ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|222859667|gb|EEE97214.1|
           predicted protein [Populus trichocarpa]
          Length = 460

 Score = 50.8 bits (120), Expect(2) = 3e-07
 Identities = 37/100 (37%), Positives = 53/100 (53%), Gaps = 8/100 (8%)
 Frame = -2

Query: 589 RRKEKADK--------LSHLPEHIIHHIFSFLDMKYVIYTSMLSRKWRYLLVSFPFLSFN 434
           R+K KA+K        + +LP+ ++ HI SFL  +  + TS+LS+KW +L  S   L+F 
Sbjct: 12  RKKLKAEKETDSGEKSIGNLPDALLEHILSFLSTEAAVRTSILSKKWLHLWKSTTNLTFF 71

Query: 433 RHIS*LSKVC*YRLSLQRFIDFVHRVLFLRDNSAIQTFHL 314
              S   K+         F+DFV RVL LR  S I  F+L
Sbjct: 72  GLKSPKRKL---------FMDFVDRVLALRGPSNIVQFYL 102



 Score = 30.4 bits (67), Expect(2) = 3e-07
 Identities = 23/76 (30%), Positives = 33/76 (43%)
 Frame = -3

Query: 282 TWICVVVCRNVQELNLQFCPVSEVFVFPDCXXXXXXXXXXXXXXXLDDSCQMTATLPNHI 103
           TWI   V RNV++L L+       FV P C               L+ +      LP+ I
Sbjct: 115 TWISAAVNRNVKDLYLELRDFEASFVLPHC------LFNCETLTELEINMPYILKLPSSI 168

Query: 102 SLPVLRTLHLKTLNFS 55
           SL  L+ L+L  + F+
Sbjct: 169 SLSCLKILNLYEVIFT 184


>ref|XP_003531612.1| PREDICTED: putative F-box/FBD/LRR-repeat protein At1g78840-like
           [Glycine max]
          Length = 450

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 34/89 (38%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
 Frame = -2

Query: 583 KEKADKLSHLPEHIIHHIFSFLDMKYVIYTSMLSRKWRYLLVSFPFLSFNRHIS*LSKVC 404
           +E  D+LS +P+ IIHHI SF++ K  I T +LS++WRYL  S P L+F+          
Sbjct: 52  EESEDRLSDMPDCIIHHILSFMETKDAIQTCVLSKRWRYLWASVPCLNFSSK-------- 103

Query: 403 *YRLSLQRFIDFVHRVLFL---RDNSAIQ 326
               S  R +DF   VL++   RD+S ++
Sbjct: 104 ----SFMRLVDFKKFVLWVLNHRDSSHVK 128


>ref|XP_002321943.1| f-box family protein [Populus trichocarpa]
           gi|222868939|gb|EEF06070.1| f-box family protein
           [Populus trichocarpa]
          Length = 360

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 34/91 (37%), Positives = 49/91 (53%)
 Frame = -2

Query: 586 RKEKADKLSHLPEHIIHHIFSFLDMKYVIYTSMLSRKWRYLLVSFPFLSFNRHIS*LSKV 407
           R E  D+LS LP+ IIH I S +D++  + TS+LS++WR+L  S   L+FN         
Sbjct: 13  RSENIDRLSDLPDSIIHKILSLVDLRCAVQTSVLSKRWRFLWTSLTDLNFN-------GT 65

Query: 406 C*YRLSLQRFIDFVHRVLFLRDNSAIQTFHL 314
           C    +   F  FV RVL  R++S +    L
Sbjct: 66  CMDFTNFVTFNRFVSRVLSTREDSNVYKIQL 96