BLASTX nr result

ID: Coptis25_contig00019014 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019014
         (868 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268728.1| PREDICTED: uncharacterized protein LOC100241...   114   2e-23
emb|CAN82190.1| hypothetical protein VITISV_031115 [Vitis vinifera]   114   2e-23
gb|AFK33554.1| unknown [Lotus japonicus]                              110   3e-22
ref|XP_002300102.1| predicted protein [Populus trichocarpa] gi|1...   107   3e-21
ref|XP_004145671.1| PREDICTED: uncharacterized protein LOC101216...   104   3e-20

>ref|XP_002268728.1| PREDICTED: uncharacterized protein LOC100241260 [Vitis vinifera]
          Length = 188

 Score =  114 bits (286), Expect = 2e-23
 Identities = 64/116 (55%), Positives = 71/116 (61%), Gaps = 2/116 (1%)
 Frame = +1

Query: 262 MFVVCPSVAYSNTLFFKSAYNVQVIVGEDEPEEVLLRRFKREVMKAGVIQECKRRRFFEN 441
           M VVCPS+AYSNTLFFKSAYNVQVIV ++EPEE LL RF+REVM+AGVIQECKRRRFFEN
Sbjct: 73  MAVVCPSLAYSNTLFFKSAYNVQVIVEDNEPEEKLLNRFRREVMRAGVIQECKRRRFFEN 132

Query: 442 SQEE--XXXXXXXXXXXXXXXXXXXXXXXDKQETLNAKKXXXXXXXXXMPEGNLPF 603
            Q+E                          KQE    KK         +PEG LPF
Sbjct: 133 KQDEKKRKTREAAKRNRRRRPQSRFSTQDSKQEGSKNKKDDDEEDNWEVPEGELPF 188


>emb|CAN82190.1| hypothetical protein VITISV_031115 [Vitis vinifera]
          Length = 188

 Score =  114 bits (286), Expect = 2e-23
 Identities = 64/116 (55%), Positives = 71/116 (61%), Gaps = 2/116 (1%)
 Frame = +1

Query: 262 MFVVCPSVAYSNTLFFKSAYNVQVIVGEDEPEEVLLRRFKREVMKAGVIQECKRRRFFEN 441
           M VVCPS+AYSNTLFFKSAYNVQVIV ++EPEE LL RF+REVM+AGVIQECKRRRFFEN
Sbjct: 73  MAVVCPSLAYSNTLFFKSAYNVQVIVEDNEPEEKLLNRFRREVMRAGVIQECKRRRFFEN 132

Query: 442 SQEE--XXXXXXXXXXXXXXXXXXXXXXXDKQETLNAKKXXXXXXXXXMPEGNLPF 603
            Q+E                          KQE    KK         +PEG LPF
Sbjct: 133 KQDEKKRKTREAAKRNRRRRPQSRFSTQDSKQEGSKNKKDDDEEDNWEVPEGELPF 188


>gb|AFK33554.1| unknown [Lotus japonicus]
          Length = 182

 Score =  110 bits (276), Expect = 3e-22
 Identities = 70/131 (53%), Positives = 81/131 (61%), Gaps = 14/131 (10%)
 Frame = +1

Query: 103 SSLCNFVPFSL-TAQPSRVARLQNYQINXXXXXXXXXXXLQCLQRVPVDNGASSMF---- 267
           SSL NF+ F L T QPS        Q+N           L+ ++  P  N AS       
Sbjct: 6   SSLPNFLSFLLPTKQPSPPP-----QLNLPSSSPLPSHTLKMMK--PSHNSASPTTPRRD 58

Query: 268 ---------VVCPSVAYSNTLFFKSAYNVQVIVGEDEPEEVLLRRFKREVMKAGVIQECK 420
                    VVCPS+AYSNTLFF+SAYNVQV+VGE+E EE LL RF+REVMKAGVIQECK
Sbjct: 59  GPSCDELSSVVCPSLAYSNTLFFRSAYNVQVVVGEEEGEERLLNRFRREVMKAGVIQECK 118

Query: 421 RRRFFENSQEE 453
           RRRFFEN Q+E
Sbjct: 119 RRRFFENKQDE 129


>ref|XP_002300102.1| predicted protein [Populus trichocarpa] gi|118487561|gb|ABK95607.1|
           unknown [Populus trichocarpa]
           gi|222847360|gb|EEE84907.1| predicted protein [Populus
           trichocarpa]
          Length = 176

 Score =  107 bits (268), Expect = 3e-21
 Identities = 60/113 (53%), Positives = 69/113 (61%), Gaps = 1/113 (0%)
 Frame = +1

Query: 268 VVCPSVAYSNTLFFKSAYNVQVIVGEDEPEEVLLRRFKREVMKAGVIQECKRRRFFENSQ 447
           VVCPS+AYSNTLFFKSAYNVQV+V ++EPEE LL RF+REVM+AGVIQECKRRRF EN Q
Sbjct: 64  VVCPSLAYSNTLFFKSAYNVQVVVEDNEPEERLLNRFRREVMRAGVIQECKRRRFHENKQ 123

Query: 448 EE-XXXXXXXXXXXXXXXXXXXXXXXDKQETLNAKKXXXXXXXXXMPEGNLPF 603
           EE                        +K E   +KK         MPEG+  F
Sbjct: 124 EEKKRKVREAHKRNRRRRPQMRGPFQNKPEASPSKKNDDDDDNWEMPEGDASF 176


>ref|XP_004145671.1| PREDICTED: uncharacterized protein LOC101216973 [Cucumis sativus]
           gi|449523367|ref|XP_004168695.1| PREDICTED:
           uncharacterized protein LOC101228071 [Cucumis sativus]
          Length = 183

 Score =  104 bits (259), Expect = 3e-20
 Identities = 46/61 (75%), Positives = 58/61 (95%)
 Frame = +1

Query: 268 VVCPSVAYSNTLFFKSAYNVQVIVGEDEPEEVLLRRFKREVMKAGVIQECKRRRFFENSQ 447
           V+CPS+AY+NT+FF+SAYNVQV+V ++EPEE LL RF+REVM+AGVIQECKRRRFFEN+Q
Sbjct: 71  VICPSLAYANTMFFRSAYNVQVVVDDNEPEERLLNRFRREVMRAGVIQECKRRRFFENTQ 130

Query: 448 E 450
           +
Sbjct: 131 D 131


Top