BLASTX nr result

ID: Coptis25_contig00019006 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019006
         (1201 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280266.2| PREDICTED: ABC transporter B family member 2...   495   e-137
ref|XP_003534020.1| PREDICTED: ABC transporter B family member 2...   475   e-132
ref|XP_002510849.1| ATNAP8, putative [Ricinus communis] gi|22354...   471   e-130
ref|XP_002321878.1| ABC transporter family protein [Populus tric...   469   e-130
ref|XP_004143641.1| PREDICTED: ABC transporter B family member 2...   464   e-128

>ref|XP_002280266.2| PREDICTED: ABC transporter B family member 28-like [Vitis vinifera]
            gi|297741119|emb|CBI31850.3| unnamed protein product
            [Vitis vinifera]
          Length = 717

 Score =  495 bits (1274), Expect = e-137
 Identities = 243/347 (70%), Positives = 298/347 (85%)
 Frame = -1

Query: 1042 LRRSNSSSNLIITCAYVSAPASDPNITENDESKLDQSNSTETTVRSHDPPATISWPLVFS 863
            L RS S   +    AYVS PASDP ITE D      +++ + TV   +PP+ IS  L++S
Sbjct: 47   LLRSRSKGVVRPPSAYVSGPASDPIITEPDPKVESSNDAHDETV---EPPSAISSSLLWS 103

Query: 862  LLLRHKLQLAISVATLIGCTSCTLTMPILSGQFFEVIIGAKPDPLWKLLSTIAVFYTLEP 683
            LL+R+KL+LA+S  TLIGC++CTL+MP+ SG+FFEV+IG +P+PLW+LLST+ V YTLEP
Sbjct: 104  LLMRYKLRLAVSAVTLIGCSACTLSMPLFSGRFFEVLIGTRPEPLWRLLSTVGVLYTLEP 163

Query: 682  IFTIIFVTNLNTVWEKVMTKLRAIVFRRILIQKVEFFDRYKVGELTGLLTSDLGSIKNVV 503
            + TII+V N+NT+WEKVM+ LRA +FRR+LIQKVEFFDRYKVGELT LLTSDLGS+K++V
Sbjct: 164  VLTIIYVVNMNTIWEKVMSTLRAQIFRRLLIQKVEFFDRYKVGELTALLTSDLGSLKDIV 223

Query: 502  SENISRDRGFRAFSEVVGTISILFVLSPQLAPILGVLMISISIFAAIYKRSTVPVFKAHG 323
            SENISRDRGFRA SEV+GTI ILF L+PQLAPILG+LM+++S+  A+YKRSTVPVFKAHG
Sbjct: 224  SENISRDRGFRALSEVIGTICILFTLAPQLAPILGILMLTVSVLVAVYKRSTVPVFKAHG 283

Query: 322  MAQASISDCASETFSAIRTVRSFGGEKRQMSTFGNQILAYQSSGTKLGIFRSANEAVTRI 143
            +AQASISDCA+ETFSAIRTVRSF GEKRQMS FG+Q++A+QSSG KLG F+S NE++TR+
Sbjct: 284  LAQASISDCATETFSAIRTVRSFSGEKRQMSMFGSQVMAFQSSGIKLGTFKSLNESLTRV 343

Query: 142  VVYVSLLTLYCLGGSKVKAGELSAGTVASFIGYTFTLTFAVQGLVNT 2
             VY+SL++LYCLGGSKVKAGELS GT+ASFIGYTFTLTFAVQGLVNT
Sbjct: 344  AVYISLMSLYCLGGSKVKAGELSVGTIASFIGYTFTLTFAVQGLVNT 390


>ref|XP_003534020.1| PREDICTED: ABC transporter B family member 28-like [Glycine max]
          Length = 710

 Score =  475 bits (1223), Expect = e-132
 Identities = 236/333 (70%), Positives = 282/333 (84%)
 Frame = -1

Query: 1000 AYVSAPASDPNITENDESKLDQSNSTETTVRSHDPPATISWPLVFSLLLRHKLQLAISVA 821
            AY +APASDPN  + D  KL  S+      R+      I+W L+ +LL++HKL+LA++VA
Sbjct: 57   AYAAAPASDPNFADPDP-KLAGSDPENARPRN-----VITWSLLCTLLMKHKLRLALAVA 110

Query: 820  TLIGCTSCTLTMPILSGQFFEVIIGAKPDPLWKLLSTIAVFYTLEPIFTIIFVTNLNTVW 641
            TL  C++CTL+MPI SG+FFEV+IG +P+PLWKLLS I V Y LEP+ TIIFV N+N VW
Sbjct: 111  TLFACSTCTLSMPIFSGRFFEVLIGTRPEPLWKLLSKIGVLYALEPLLTIIFVINMNIVW 170

Query: 640  EKVMTKLRAIVFRRILIQKVEFFDRYKVGELTGLLTSDLGSIKNVVSENISRDRGFRAFS 461
            EK+M+ LRA +F RILIQK+EFFD+YKVGELTGLLTSDLGS+KN+VSEN+SRDRGFRA S
Sbjct: 171  EKIMSTLRAQIFGRILIQKIEFFDKYKVGELTGLLTSDLGSLKNIVSENVSRDRGFRALS 230

Query: 460  EVVGTISILFVLSPQLAPILGVLMISISIFAAIYKRSTVPVFKAHGMAQASISDCASETF 281
            EV+GTI ILF LSPQLAPILGVLM+++SI  A+YKRST+PVFKAHGM QASISDC +ETF
Sbjct: 231  EVIGTIFILFSLSPQLAPILGVLMLAVSISIAVYKRSTLPVFKAHGMVQASISDCVTETF 290

Query: 280  SAIRTVRSFGGEKRQMSTFGNQILAYQSSGTKLGIFRSANEAVTRIVVYVSLLTLYCLGG 101
            SAIRTVRSFGGEKRQM TF NQ+L++QSSG KLG F+S NE++TR+ VY+SL+ LYCLGG
Sbjct: 291  SAIRTVRSFGGEKRQMFTFANQVLSFQSSGIKLGTFKSVNESLTRVAVYISLIALYCLGG 350

Query: 100  SKVKAGELSAGTVASFIGYTFTLTFAVQGLVNT 2
            SKVKAGELS GT+ASFIGYTFTLTFAVQGLVNT
Sbjct: 351  SKVKAGELSVGTMASFIGYTFTLTFAVQGLVNT 383


>ref|XP_002510849.1| ATNAP8, putative [Ricinus communis] gi|223549964|gb|EEF51451.1|
            ATNAP8, putative [Ricinus communis]
          Length = 712

 Score =  471 bits (1212), Expect = e-130
 Identities = 232/336 (69%), Positives = 284/336 (84%)
 Frame = -1

Query: 1009 ITCAYVSAPASDPNITENDESKLDQSNSTETTVRSHDPPATISWPLVFSLLLRHKLQLAI 830
            I CAYVS P   P + E  E K+  S++T   V+  + P  ISW L++SLLL HKL+LA+
Sbjct: 56   IPCAYVSGP---PTVGE-PEPKVKASDATSEKVQ--ESPKVISWGLLWSLLLNHKLRLAV 109

Query: 829  SVATLIGCTSCTLTMPILSGQFFEVIIGAKPDPLWKLLSTIAVFYTLEPIFTIIFVTNLN 650
               +L+ CT+CTL+ PI SG+FFEV+IGA+P+PLW+LL+ +A+ Y+LEPIFT+IF+ N+N
Sbjct: 110  CAMSLVACTTCTLSQPIFSGRFFEVLIGARPEPLWRLLTKVAIVYSLEPIFTVIFIVNMN 169

Query: 649  TVWEKVMTKLRAIVFRRILIQKVEFFDRYKVGELTGLLTSDLGSIKNVVSENISRDRGFR 470
            TVWEKVM+ LRA  F R+LIQKVEFFDRYKVGEL+ LLT+++GS+K++VSEN+SRDRGFR
Sbjct: 170  TVWEKVMSTLRAHTFGRVLIQKVEFFDRYKVGELSALLTTEMGSLKDIVSENVSRDRGFR 229

Query: 469  AFSEVVGTISILFVLSPQLAPILGVLMISISIFAAIYKRSTVPVFKAHGMAQASISDCAS 290
            A SEV+GTI ILF L+PQLAPILG+LM+S+S+  AIYKRST+PVFKAHGM QAS+SDC +
Sbjct: 230  AISEVIGTICILFTLAPQLAPILGILMLSVSVLVAIYKRSTIPVFKAHGMVQASMSDCVT 289

Query: 289  ETFSAIRTVRSFGGEKRQMSTFGNQILAYQSSGTKLGIFRSANEAVTRIVVYVSLLTLYC 110
            ETFSAIRTVRSFGGEKRQMS FG+Q+LAYQSSG KLG F+S NE++TR+ VYVSLL LY 
Sbjct: 290  ETFSAIRTVRSFGGEKRQMSMFGSQVLAYQSSGIKLGTFKSVNESLTRVAVYVSLLALYS 349

Query: 109  LGGSKVKAGELSAGTVASFIGYTFTLTFAVQGLVNT 2
            LGGSKVKAGELS GT+ASFIGYTFTLTF VQGLVNT
Sbjct: 350  LGGSKVKAGELSVGTLASFIGYTFTLTFGVQGLVNT 385


>ref|XP_002321878.1| ABC transporter family protein [Populus trichocarpa]
            gi|222868874|gb|EEF06005.1| ABC transporter family
            protein [Populus trichocarpa]
          Length = 562

 Score =  469 bits (1207), Expect = e-130
 Identities = 241/360 (66%), Positives = 281/360 (78%), Gaps = 24/360 (6%)
 Frame = -1

Query: 1009 ITCAYVSAPASDPNITENDESKLDQSNSTETTVRSHDPPATISWPLVFSLLLRHKLQLAI 830
            IT AYV+ PASDP +TE D  KLD +++  +          ISW L++SLL +HK++L +
Sbjct: 58   ITSAYVTGPASDPIVTEPDH-KLDPTDNDSSVTEKVQSTELISWGLLWSLLAKHKVRLVV 116

Query: 829  SVATLIGCTSCTLTMPILSGQFFEVIIGAKPDPLWKLLSTIAVFYTLEPIFTIIFVTNLN 650
               TL+GCTSCTL+MPI SG+FFEV+IGA+P+PLW+LLS + V Y LEPIFT+IFV N+N
Sbjct: 117  CAFTLVGCTSCTLSMPIFSGRFFEVLIGARPEPLWRLLSKMGVLYALEPIFTVIFVVNMN 176

Query: 649  TVWEKVMTKLRAIVFRRILIQKVEFFDRYKVGELTGLLTSDLGSIKNVVSENISRDRGFR 470
            TVWEKVM  LRA +FRR+LIQKVEFFDRYKVGEL+ LL SDLGS K++VSENISRDRGFR
Sbjct: 177  TVWEKVMATLRAQIFRRVLIQKVEFFDRYKVGELSALLMSDLGSFKDIVSENISRDRGFR 236

Query: 469  AFSE------------------------VVGTISILFVLSPQLAPILGVLMISISIFAAI 362
            AFSE                        V GTI ILF L+PQLAPILGVLM ++SI  A+
Sbjct: 237  AFSEASHSILKQKSYGCFTSPVCLLPQQVTGTICILFALAPQLAPILGVLMFAVSISVAV 296

Query: 361  YKRSTVPVFKAHGMAQASISDCASETFSAIRTVRSFGGEKRQMSTFGNQILAYQSSGTKL 182
            YKRSTVPVFKAHG AQASISDC +ETFSAIRTVRSFGGEKRQM  FG+Q+LAYQ SG KL
Sbjct: 297  YKRSTVPVFKAHGKAQASISDCVTETFSAIRTVRSFGGEKRQMLNFGSQVLAYQRSGIKL 356

Query: 181  GIFRSANEAVTRIVVYVSLLTLYCLGGSKVKAGELSAGTVASFIGYTFTLTFAVQGLVNT 2
            G F+S NE++TR+ VY+SLLTLY LGGS+VKAG LS GTVASFIGYTFTLTFAVQGLVNT
Sbjct: 357  GAFKSVNESLTRVAVYISLLTLYSLGGSRVKAGLLSVGTVASFIGYTFTLTFAVQGLVNT 416


>ref|XP_004143641.1| PREDICTED: ABC transporter B family member 28-like [Cucumis sativus]
          Length = 710

 Score =  464 bits (1193), Expect = e-128
 Identities = 231/347 (66%), Positives = 287/347 (82%)
 Frame = -1

Query: 1042 LRRSNSSSNLIITCAYVSAPASDPNITENDESKLDQSNSTETTVRSHDPPATISWPLVFS 863
            +++S+SS     T AYV+ PASDPN++E+D    D S+S    V        ++  L   
Sbjct: 55   IKKSSSS-----TFAYVTGPASDPNVSESDPKVDDASDSLVRVV------GVLNLGLFLK 103

Query: 862  LLLRHKLQLAISVATLIGCTSCTLTMPILSGQFFEVIIGAKPDPLWKLLSTIAVFYTLEP 683
            LL +HKL+L  S+ TL+ CT+CTL+MP  SG+FFEV+IGAKP  LW+LLST+ V Y LEP
Sbjct: 104  LLTKHKLRLLGSLLTLLCCTTCTLSMPFFSGRFFEVLIGAKPGSLWRLLSTVGVLYALEP 163

Query: 682  IFTIIFVTNLNTVWEKVMTKLRAIVFRRILIQKVEFFDRYKVGELTGLLTSDLGSIKNVV 503
            I T++FVTN+N +WEKVM++LRA +F R+LIQKVEFFDRYKVGE+TGLLTSDLGS+K+VV
Sbjct: 164  ILTVLFVTNMNFMWEKVMSRLRAQIFGRLLIQKVEFFDRYKVGEITGLLTSDLGSLKDVV 223

Query: 502  SENISRDRGFRAFSEVVGTISILFVLSPQLAPILGVLMISISIFAAIYKRSTVPVFKAHG 323
            SEN+SRDRGFRAFSEV+GTI ILF LSPQLAPILG+LM+++S+  A+YKRST+PVFKAHG
Sbjct: 224  SENVSRDRGFRAFSEVIGTICILFALSPQLAPILGLLMLTVSVSVAVYKRSTIPVFKAHG 283

Query: 322  MAQASISDCASETFSAIRTVRSFGGEKRQMSTFGNQILAYQSSGTKLGIFRSANEAVTRI 143
            +AQAS++DCA+ETFSAIRTVRSFGGEKRQM  FG Q++AY+SSG  LG F+S NE++TR+
Sbjct: 284  LAQASMADCATETFSAIRTVRSFGGEKRQMFNFGRQVMAYESSGISLGTFKSLNESLTRV 343

Query: 142  VVYVSLLTLYCLGGSKVKAGELSAGTVASFIGYTFTLTFAVQGLVNT 2
             VY+SL+TLY LGG KVKAGELS GT+ASFIGYTFTLTFAVQGLVN+
Sbjct: 344  AVYISLMTLYWLGGDKVKAGELSVGTMASFIGYTFTLTFAVQGLVNS 390


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