BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019003
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510773.1| ATP-dependent RNA helicase, putative [Ricinu...    89   5e-16
gb|ADN33898.1| ATP-dependent RNA helicase [Cucumis melo subsp. m...    82   6e-14
ref|XP_004156439.1| PREDICTED: probable pre-mRNA-splicing factor...    81   8e-14
ref|XP_004139208.1| PREDICTED: uncharacterized protein LOC101216...    81   8e-14
ref|XP_002268542.1| PREDICTED: probable pre-mRNA-splicing factor...    81   8e-14

>ref|XP_002510773.1| ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223551474|gb|EEF52960.1| ATP-dependent RNA helicase,
           putative [Ricinus communis]
          Length = 1177

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 47/80 (58%), Positives = 54/80 (67%), Gaps = 3/80 (3%)
 Frame = +1

Query: 166 DGDWSLNDGKRVNSEDDRRFT*NGEMV---EPELFQVYVGRVSSVINIGCFVQLNDFRGK 336
           DGD    DG   N E  R    N       +PEL++VY GRVS V++ GCFVQLNDFRGK
Sbjct: 189 DGDRHRRDGSVDNGETHRETRRNNGSYTSSDPELYRVYKGRVSRVMDSGCFVQLNDFRGK 248

Query: 337 EGLVHVSQMTNKRVANAKDV 396
           EGLVHVSQM  +R+ANAKDV
Sbjct: 249 EGLVHVSQMATRRIANAKDV 268


>gb|ADN33898.1| ATP-dependent RNA helicase [Cucumis melo subsp. melo]
          Length = 953

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 37/50 (74%), Positives = 44/50 (88%)
 Frame = +1

Query: 247 EPELFQVYVGRVSSVINIGCFVQLNDFRGKEGLVHVSQMTNKRVANAKDV 396
           EPEL+ VY GRVS V++ GCFVQLNDFRGKEGLVHVSQ+  +R++NAKDV
Sbjct: 266 EPELYTVYKGRVSRVMDTGCFVQLNDFRGKEGLVHVSQIATRRISNAKDV 315


>ref|XP_004156439.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase-like [Cucumis sativus]
          Length = 1181

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 37/50 (74%), Positives = 43/50 (86%)
 Frame = +1

Query: 247 EPELFQVYVGRVSSVINIGCFVQLNDFRGKEGLVHVSQMTNKRVANAKDV 396
           EPEL+ VY GRVS V++ GCFVQLNDFRGKEGLVHVSQ+  +R+ NAKDV
Sbjct: 224 EPELYTVYKGRVSRVMDTGCFVQLNDFRGKEGLVHVSQIATRRITNAKDV 273


>ref|XP_004139208.1| PREDICTED: uncharacterized protein LOC101216792 [Cucumis sativus]
          Length = 1218

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 37/50 (74%), Positives = 43/50 (86%)
 Frame = +1

Query: 247 EPELFQVYVGRVSSVINIGCFVQLNDFRGKEGLVHVSQMTNKRVANAKDV 396
           EPEL+ VY GRVS V++ GCFVQLNDFRGKEGLVHVSQ+  +R+ NAKDV
Sbjct: 261 EPELYTVYKGRVSRVMDTGCFVQLNDFRGKEGLVHVSQIATRRITNAKDV 310


>ref|XP_002268542.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase-like isoform 2 [Vitis vinifera]
          Length = 1175

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 45/77 (58%), Positives = 52/77 (67%), Gaps = 2/77 (2%)
 Frame = +1

Query: 172 DWSLNDGKRVNSEDDRRFT*NGEMV--EPELFQVYVGRVSSVINIGCFVQLNDFRGKEGL 345
           D S  DG     + DRR   NG     EPEL+ VY GRVS V++ GCFVQLND +GKEGL
Sbjct: 195 DGSERDGGDRRGDRDRR---NGRYHSDEPELYNVYKGRVSRVMDTGCFVQLNDLKGKEGL 251

Query: 346 VHVSQMTNKRVANAKDV 396
           VHVSQ+  +RV NAKDV
Sbjct: 252 VHVSQIATRRVGNAKDV 268