BLASTX nr result

ID: Coptis25_contig00018995 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018995
         (506 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537940.1| PREDICTED: uncharacterized protein LOC100782...   156   2e-36
gb|ACU19121.1| unknown [Glycine max]                                  156   2e-36
gb|ABK94599.1| unknown [Populus trichocarpa]                          155   2e-36
ref|XP_002533442.1| conserved hypothetical protein [Ricinus comm...   154   6e-36
ref|XP_002264803.2| PREDICTED: UPF0454 protein C12orf49 homolog ...   152   4e-35

>ref|XP_003537940.1| PREDICTED: uncharacterized protein LOC100782588 [Glycine max]
          Length = 281

 Score =  156 bits (394), Expect = 2e-36
 Identities = 76/119 (63%), Positives = 89/119 (74%), Gaps = 1/119 (0%)
 Frame = +1

Query: 151 RNSGANLIISLVFLVQL-FPNTVFSIRMDVKIQKKQACRNTVQGRYLLSDDNGHVCNALS 327
           RN+   + ISL+ LV   F +T+ +IR DV  Q    C+ TVQGRYLLSDDNG+VCNA S
Sbjct: 11  RNNSICIKISLLILVIFHFSSTITAIRKDVGFQIIHPCKTTVQGRYLLSDDNGYVCNAAS 70

Query: 328 VDHWSRCCPETGKKFSCQGCNLVSQCCTSYEYCVSCCLNPAQTHKELALKVKVAKPVTA 504
           V+  SRCCP+ G+KFSC GCNL+SQCC SYEYCVSCCLNPA   KE  LK+KVAKP TA
Sbjct: 71  VNSRSRCCPQRGEKFSCHGCNLLSQCCNSYEYCVSCCLNPALISKEQVLKMKVAKPTTA 129


>gb|ACU19121.1| unknown [Glycine max]
          Length = 224

 Score =  156 bits (394), Expect = 2e-36
 Identities = 76/119 (63%), Positives = 89/119 (74%), Gaps = 1/119 (0%)
 Frame = +1

Query: 151 RNSGANLIISLVFLVQL-FPNTVFSIRMDVKIQKKQACRNTVQGRYLLSDDNGHVCNALS 327
           RN+   + ISL+ LV   F +T+ +IR DV  Q    C+ TVQGRYLLSDDNG+VCNA S
Sbjct: 11  RNNSICIKISLLILVIFHFSSTITAIRKDVGFQIIHPCKTTVQGRYLLSDDNGYVCNAAS 70

Query: 328 VDHWSRCCPETGKKFSCQGCNLVSQCCTSYEYCVSCCLNPAQTHKELALKVKVAKPVTA 504
           V+  SRCCP+ G+KFSC GCNL+SQCC SYEYCVSCCLNPA   KE  LK+KVAKP TA
Sbjct: 71  VNSRSRCCPQRGEKFSCHGCNLLSQCCNSYEYCVSCCLNPALISKEQVLKMKVAKPTTA 129


>gb|ABK94599.1| unknown [Populus trichocarpa]
          Length = 268

 Score =  155 bits (393), Expect = 2e-36
 Identities = 71/113 (62%), Positives = 91/113 (80%)
 Frame = +1

Query: 166 NLIISLVFLVQLFPNTVFSIRMDVKIQKKQACRNTVQGRYLLSDDNGHVCNALSVDHWSR 345
           +L + L+ L Q F + + +IR D+  ++ ++CRNTVQGRYLLSDDNG+VC+ALSVD  SR
Sbjct: 5   HLSLQLLILFQ-FSSIISAIRKDIGFEQSRSCRNTVQGRYLLSDDNGYVCDALSVDPPSR 63

Query: 346 CCPETGKKFSCQGCNLVSQCCTSYEYCVSCCLNPAQTHKELALKVKVAKPVTA 504
           CCPE G +FSCQGCNLVSQCC SYE+CVSCCL+P++T +   LKVK+AKP TA
Sbjct: 64  CCPENGLRFSCQGCNLVSQCCNSYEFCVSCCLHPSRTQEAQVLKVKIAKPSTA 116


>ref|XP_002533442.1| conserved hypothetical protein [Ricinus communis]
           gi|223526704|gb|EEF28938.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 251

 Score =  154 bits (390), Expect = 6e-36
 Identities = 69/114 (60%), Positives = 88/114 (77%)
 Frame = +1

Query: 163 ANLIISLVFLVQLFPNTVFSIRMDVKIQKKQACRNTVQGRYLLSDDNGHVCNALSVDHWS 342
           A  I+  +F++Q  P  +FSIR D+   + + CR TVQGR+LLSDDNGHVC+ALS+D  S
Sbjct: 11  APCILFPLFILQFLP-VIFSIRRDIGFHEMKICRTTVQGRFLLSDDNGHVCDALSLDPQS 69

Query: 343 RCCPETGKKFSCQGCNLVSQCCTSYEYCVSCCLNPAQTHKELALKVKVAKPVTA 504
           RCCP  G+KFSC GCNL+S CC SYE+CVSCCLNPA+T +E  +K+K+AKP TA
Sbjct: 70  RCCPVRGEKFSCHGCNLLSHCCNSYEFCVSCCLNPARTQEEEVMKLKIAKPATA 123


>ref|XP_002264803.2| PREDICTED: UPF0454 protein C12orf49 homolog [Vitis vinifera]
          Length = 279

 Score =  152 bits (383), Expect = 4e-35
 Identities = 74/122 (60%), Positives = 94/122 (77%), Gaps = 4/122 (3%)
 Frame = +1

Query: 151 RNSGANLIISLVF----LVQLFPNTVFSIRMDVKIQKKQACRNTVQGRYLLSDDNGHVCN 318
           R S + LI+SL+F    ++Q+  + V +IR D  + +K+ CR TVQGRYL +DDNGHVC+
Sbjct: 6   RMSNSRLILSLLFRFILIIQIL-SRVSAIRKDPNLLEKRICRTTVQGRYLRTDDNGHVCD 64

Query: 319 ALSVDHWSRCCPETGKKFSCQGCNLVSQCCTSYEYCVSCCLNPAQTHKELALKVKVAKPV 498
           ALS+D  S CC    ++FSC GCNL+SQCC SYE+CVSCCLNPA+T KELALKVK+AKPV
Sbjct: 65  ALSMDPQSGCCFGKREQFSCHGCNLISQCCNSYEFCVSCCLNPARTQKELALKVKMAKPV 124

Query: 499 TA 504
           TA
Sbjct: 125 TA 126


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