BLASTX nr result

ID: Coptis25_contig00018981 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018981
         (1012 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284106.1| PREDICTED: branched-chain-amino-acid aminotr...   439   e-121
ref|XP_002516560.1| D-alanine aminotransferase, putative [Ricinu...   415   e-113
ref|XP_003526478.1| PREDICTED: branched-chain-amino-acid aminotr...   410   e-112
ref|XP_003551118.1| PREDICTED: branched-chain-amino-acid aminotr...   401   e-109
ref|NP_001234878.1| 4-amino-4-deoxychorismate lyase [Solanum lyc...   400   e-109

>ref|XP_002284106.1| PREDICTED: branched-chain-amino-acid aminotransferase-like protein 3,
            chloroplastic [Vitis vinifera]
            gi|296081877|emb|CBI20882.3| unnamed protein product
            [Vitis vinifera]
          Length = 388

 Score =  439 bits (1129), Expect = e-121
 Identities = 215/281 (76%), Positives = 247/281 (87%), Gaps = 3/281 (1%)
 Frame = +1

Query: 178  VLHNSEQIEEFIN---VSDVPLLSSSEVFKRLKEDREKRKGNQQFLAMYSSVFGGITTDP 348
            V+ NS Q E  ++   ++DVPLLS  E  +RLK  +E +K  QQ+LAMYSS+FGGITTD 
Sbjct: 47   VVRNSNQAEPLVDSTQIADVPLLSCLEAIERLKTSQENQKSKQQYLAMYSSIFGGITTDK 106

Query: 349  TTMVIPMDDHMVHRGHGVFDTAAIMDGYLYELDQHVDRFLRSASMAKISVPFDRESIRNI 528
              MVIPMDDHMVHRGHGVFDTAAIMDGYLYELDQH+DRFLRSASMAKI+ PFDRESIR I
Sbjct: 107  AAMVIPMDDHMVHRGHGVFDTAAIMDGYLYELDQHLDRFLRSASMAKINPPFDRESIRGI 166

Query: 529  LIQTVSASKCREGSLRYWLSVGPGDFQLSPSGCKQSALYAIVIQDKTPLGREGVKVWTST 708
            LIQTVSASKCR+GSLRYWLS GPGDFQLSPSGC+QSALYAIVIQD +P  ++G+KV TS+
Sbjct: 167  LIQTVSASKCRKGSLRYWLSAGPGDFQLSPSGCQQSALYAIVIQDLSPFDQKGIKVVTSS 226

Query: 709  VPIKPPQFATMKSVNYLPNVLSKMEAEEKGGFAAIWLDEDGYIAEGPNMNVAFVTKENEL 888
            VPIK PQFATMKSVNYLPNVLSKMEAEE G +AAIWLD+DG+IAEGPNMNVAFVTKE EL
Sbjct: 227  VPIKTPQFATMKSVNYLPNVLSKMEAEENGSYAAIWLDDDGFIAEGPNMNVAFVTKEKEL 286

Query: 889  LMPSFDKILSGCTARRALSLSEGLVREGRISGIRVGNVTME 1011
            +MP FDKILSGCTA+R L+L+EGL+REG++ GIRVGN+++E
Sbjct: 287  VMPHFDKILSGCTAKRVLALAEGLMREGKLQGIRVGNLSVE 327


>ref|XP_002516560.1| D-alanine aminotransferase, putative [Ricinus communis]
            gi|223544380|gb|EEF45901.1| D-alanine aminotransferase,
            putative [Ricinus communis]
          Length = 318

 Score =  415 bits (1066), Expect = e-113
 Identities = 199/255 (78%), Positives = 231/255 (90%)
 Frame = +1

Query: 247  EVFKRLKEDREKRKGNQQFLAMYSSVFGGITTDPTTMVIPMDDHMVHRGHGVFDTAAIMD 426
            +  +RL+ +REK KG QQFLAMYSS+FGGITTDP  MVIP+DDHMVHRGHGVFDTAAIMD
Sbjct: 4    KAMERLRTNREKHKGKQQFLAMYSSIFGGITTDPAAMVIPLDDHMVHRGHGVFDTAAIMD 63

Query: 427  GYLYELDQHVDRFLRSASMAKISVPFDRESIRNILIQTVSASKCREGSLRYWLSVGPGDF 606
            G+LYELDQH++R L SASMAKI++PF+RESIR ILIQTV+ASKC++GSLRYWLS GPGDF
Sbjct: 64   GHLYELDQHLNRILSSASMAKINLPFNRESIRKILIQTVTASKCQKGSLRYWLSAGPGDF 123

Query: 607  QLSPSGCKQSALYAIVIQDKTPLGREGVKVWTSTVPIKPPQFATMKSVNYLPNVLSKMEA 786
            QLSPSGC+Q ALYAIVIQD + L  +GVKV TS+VPIKPP+FATMKSVNYLPNVLSKMEA
Sbjct: 124  QLSPSGCQQPALYAIVIQDHSQLDSKGVKVVTSSVPIKPPKFATMKSVNYLPNVLSKMEA 183

Query: 787  EEKGGFAAIWLDEDGYIAEGPNMNVAFVTKENELLMPSFDKILSGCTARRALSLSEGLVR 966
            EE G FAAIWLD DG+IAEGPNMNVAFVTKE +L+MP FDKILSGCTARR L+L+EGLV+
Sbjct: 184  EENGAFAAIWLDNDGFIAEGPNMNVAFVTKEKDLIMPYFDKILSGCTARRVLALAEGLVK 243

Query: 967  EGRISGIRVGNVTME 1011
            EG++ G++VGN+T+E
Sbjct: 244  EGKLHGVKVGNLTIE 258


>ref|XP_003526478.1| PREDICTED: branched-chain-amino-acid aminotransferase-like protein 3,
            chloroplastic-like [Glycine max]
          Length = 345

 Score =  410 bits (1054), Expect = e-112
 Identities = 200/265 (75%), Positives = 226/265 (85%)
 Frame = +1

Query: 217  VSDVPLLSSSEVFKRLKEDREKRKGNQQFLAMYSSVFGGITTDPTTMVIPMDDHMVHRGH 396
            +SDVPLLS SE  ++LK  REK KG QQFLAMYSS+FGGITTDP  MVIPMDDHMVHRGH
Sbjct: 20   ISDVPLLSCSEAMEKLKSFREKVKGKQQFLAMYSSIFGGITTDPAAMVIPMDDHMVHRGH 79

Query: 397  GVFDTAAIMDGYLYELDQHVDRFLRSASMAKISVPFDRESIRNILIQTVSASKCREGSLR 576
            GVFDT AI+DGYLYELDQH+DRF+RSAS AKI+ P+DR +IR ILIQTVSASKCR G+LR
Sbjct: 80   GVFDTTAIIDGYLYELDQHLDRFIRSASTAKINPPYDRGTIRGILIQTVSASKCRNGTLR 139

Query: 577  YWLSVGPGDFQLSPSGCKQSALYAIVIQDKTPLGREGVKVWTSTVPIKPPQFATMKSVNY 756
            YWLS GPGDF LSPSGC +S LYAI IQD +P+   GVKV TS VPIKPPQFAT KSVNY
Sbjct: 140  YWLSAGPGDFDLSPSGCHKSCLYAITIQDLSPINFRGVKVVTSNVPIKPPQFATTKSVNY 199

Query: 757  LPNVLSKMEAEEKGGFAAIWLDEDGYIAEGPNMNVAFVTKENELLMPSFDKILSGCTARR 936
            LPNVLSKMEAEE G F  IWLD DG++AEGP+MNVAFVTKE EL+MP  DKILSGCTA+R
Sbjct: 200  LPNVLSKMEAEELGAFVGIWLDSDGFVAEGPSMNVAFVTKEKELVMPLCDKILSGCTAKR 259

Query: 937  ALSLSEGLVREGRISGIRVGNVTME 1011
             L+L+E LVREG++ GIR+ NV++E
Sbjct: 260  VLTLAESLVREGKLCGIRMKNVSVE 284


>ref|XP_003551118.1| PREDICTED: branched-chain-amino-acid aminotransferase-like protein 3,
            chloroplastic-like [Glycine max]
          Length = 382

 Score =  401 bits (1030), Expect = e-109
 Identities = 199/267 (74%), Positives = 228/267 (85%), Gaps = 2/267 (0%)
 Frame = +1

Query: 217  VSDVPLLSSSEVFKRLKEDREKRKGNQQFLAMYSSVFGGITTDPTTMVIPMDDHMVHRGH 396
            VS VPLL+S++ +++LK  RE  KG QQFLAMYSS+FGGITTDP  MVIPMDDHMVHRGH
Sbjct: 55   VSRVPLLTSTQAYEKLKTFRENIKGKQQFLAMYSSIFGGITTDPAAMVIPMDDHMVHRGH 114

Query: 397  GVFDTAAIMDGYLYELDQHVDRFLRSASMAKISVPFDRESIRNILIQTVSASKCREGSLR 576
            GVFDTAAIMDGYLYELDQH+DRFLRSASM+KI  PFDR SIR ILIQTVSASKCR+GSLR
Sbjct: 115  GVFDTAAIMDGYLYELDQHLDRFLRSASMSKIDPPFDRGSIRRILIQTVSASKCRKGSLR 174

Query: 577  YWLSVGPGDFQLSPSGCKQSALYAIVIQDKTPLGR--EGVKVWTSTVPIKPPQFATMKSV 750
            YWLS GPGDFQLSPS C +S+LYAIVIQD +P      GVKV TS++PIK P+FA  KSV
Sbjct: 175  YWLSAGPGDFQLSPSCCHRSSLYAIVIQDLSPSSPNFRGVKVVTSSIPIKHPKFAITKSV 234

Query: 751  NYLPNVLSKMEAEEKGGFAAIWLDEDGYIAEGPNMNVAFVTKENELLMPSFDKILSGCTA 930
            NYLPNVLSK+EAEE G F  IWLD +G++AEGPNMNVAFVTK+ EL+MP FDKILSGCTA
Sbjct: 235  NYLPNVLSKVEAEEAGAFVGIWLDGEGFVAEGPNMNVAFVTKDKELIMPHFDKILSGCTA 294

Query: 931  RRALSLSEGLVREGRISGIRVGNVTME 1011
            +R L+L+E L+REG++ GIRV  VT+E
Sbjct: 295  KRVLTLAESLLREGKLKGIRVKTVTVE 321


>ref|NP_001234878.1| 4-amino-4-deoxychorismate lyase [Solanum lycopersicum]
            gi|50345543|gb|AAT74744.1| 4-amino-4-deoxychorismate
            lyase [Solanum lycopersicum]
          Length = 395

 Score =  400 bits (1028), Expect = e-109
 Identities = 196/263 (74%), Positives = 223/263 (84%)
 Frame = +1

Query: 223  DVPLLSSSEVFKRLKEDREKRKGNQQFLAMYSSVFGGITTDPTTMVIPMDDHMVHRGHGV 402
            DVPLLS SEV +R++  RE  K  Q +LAMYSSVFGGITTD   MVIPMDDHMVHRGHGV
Sbjct: 72   DVPLLSCSEVIERMRTSREGYKTKQLYLAMYSSVFGGITTDTAAMVIPMDDHMVHRGHGV 131

Query: 403  FDTAAIMDGYLYELDQHVDRFLRSASMAKISVPFDRESIRNILIQTVSASKCREGSLRYW 582
            FDTAAIMDGYLYELDQH+DRFL SA+MAKI +PFDRESIR ILI+TVS SKCR+GSLRYW
Sbjct: 132  FDTAAIMDGYLYELDQHLDRFLGSATMAKIQIPFDRESIRQILIRTVSVSKCRKGSLRYW 191

Query: 583  LSVGPGDFQLSPSGCKQSALYAIVIQDKTPLGREGVKVWTSTVPIKPPQFATMKSVNYLP 762
             S GPGDFQLS SGC Q+ LYAIVI+D++P    G+KV TS++PIKP QFA MKSVNYLP
Sbjct: 192  FSAGPGDFQLSSSGCHQATLYAIVIKDQSPPDHNGIKVVTSSIPIKPLQFAVMKSVNYLP 251

Query: 763  NVLSKMEAEEKGGFAAIWLDEDGYIAEGPNMNVAFVTKENELLMPSFDKILSGCTARRAL 942
            N LSKMEAEE   +AAIWLD DG++AEGPNMNVAFVTKE +LLMP FDKILSGCTA+R L
Sbjct: 252  NALSKMEAEENDAYAAIWLDGDGFVAEGPNMNVAFVTKEKDLLMPCFDKILSGCTAKRVL 311

Query: 943  SLSEGLVREGRISGIRVGNVTME 1011
             L+E LV+EG++ GIRV NV++E
Sbjct: 312  VLAENLVKEGKLRGIRVENVSVE 334


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