BLASTX nr result

ID: Coptis25_contig00018979 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018979
         (655 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21495.3| unnamed protein product [Vitis vinifera]               87   4e-15
ref|XP_002276330.1| PREDICTED: uncharacterized protein LOC100268...    87   4e-15
ref|XP_002532942.1| conserved hypothetical protein [Ricinus comm...    79   1e-12
ref|XP_003532734.1| PREDICTED: uncharacterized protein LOC100820...    71   2e-10
ref|XP_003530716.1| PREDICTED: uncharacterized protein LOC100818...    58   2e-06

>emb|CBI21495.3| unnamed protein product [Vitis vinifera]
          Length = 369

 Score = 86.7 bits (213), Expect = 4e-15
 Identities = 40/58 (68%), Positives = 52/58 (89%)
 Frame = +2

Query: 2   EKRVIPRYFVLEILKSKKLLKRNTSFVNVIQLSEDEFLDKYISKYRDNAEELLIAYKG 175
           E RVIPRY VL+ILKSK+LLKR  SF+NV+ L+++EFLDK+IS++ D+AEELL+AYKG
Sbjct: 304 EDRVIPRYRVLQILKSKRLLKREPSFINVLSLTDEEFLDKFISRFADDAEELLVAYKG 361


>ref|XP_002276330.1| PREDICTED: uncharacterized protein LOC100268158 [Vitis vinifera]
          Length = 388

 Score = 86.7 bits (213), Expect = 4e-15
 Identities = 40/58 (68%), Positives = 52/58 (89%)
 Frame = +2

Query: 2   EKRVIPRYFVLEILKSKKLLKRNTSFVNVIQLSEDEFLDKYISKYRDNAEELLIAYKG 175
           E RVIPRY VL+ILKSK+LLKR  SF+NV+ L+++EFLDK+IS++ D+AEELL+AYKG
Sbjct: 323 EDRVIPRYRVLQILKSKRLLKREPSFINVLSLTDEEFLDKFISRFADDAEELLVAYKG 380


>ref|XP_002532942.1| conserved hypothetical protein [Ricinus communis]
           gi|223527293|gb|EEF29446.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 366

 Score = 78.6 bits (192), Expect = 1e-12
 Identities = 37/69 (53%), Positives = 54/69 (78%)
 Frame = +2

Query: 2   EKRVIPRYFVLEILKSKKLLKRNTSFVNVIQLSEDEFLDKYISKYRDNAEELLIAYKGGL 181
           E+RVIPRY VLEI+K KKLLK+  SF+NV+ L+E+EF+ K+I+ + D+AEELL+AY+   
Sbjct: 298 EERVIPRYKVLEIMKLKKLLKKQPSFINVLNLTEEEFVQKFIASFPDDAEELLVAYRSHT 357

Query: 182 ANVDTSEES 208
            +  + E+S
Sbjct: 358 LDSYSEEKS 366


>ref|XP_003532734.1| PREDICTED: uncharacterized protein LOC100820280 [Glycine max]
          Length = 1401

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 33/58 (56%), Positives = 46/58 (79%)
 Frame = +2

Query: 2    EKRVIPRYFVLEILKSKKLLKRNTSFVNVIQLSEDEFLDKYISKYRDNAEELLIAYKG 175
            E RV+PRY V ++L  KKL K+  S+++++ LSE+ FLDKYI  +R+NAEELL+AYKG
Sbjct: 1339 EDRVLPRYRVFQLLIEKKLCKKVPSYIHLLCLSEEVFLDKYIPHFRENAEELLVAYKG 1396


>ref|XP_003530716.1| PREDICTED: uncharacterized protein LOC100818835 [Glycine max]
          Length = 379

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 28/62 (45%), Positives = 44/62 (70%)
 Frame = +2

Query: 2   EKRVIPRYFVLEILKSKKLLKRNTSFVNVIQLSEDEFLDKYISKYRDNAEELLIAYKGGL 181
           EK V+PR+ V+EILKS+ L+KR++   + I++SE  FL+KY+ ++  N   LL AY+G  
Sbjct: 318 EKTVMPRFAVVEILKSRGLIKRDSKISSFIKISEKMFLEKYVIRFLKNEPLLLDAYRGQK 377

Query: 182 AN 187
           +N
Sbjct: 378 SN 379


Top