BLASTX nr result

ID: Coptis25_contig00018970 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018970
         (1288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317239.1| predicted protein [Populus trichocarpa] gi|2...   360   e-140
ref|XP_002521428.1| beta-galactosidase, putative [Ricinus commun...   357   e-137
ref|XP_003538054.1| PREDICTED: beta-galactosidase 8-like [Glycin...   254   4e-95
gb|AAQ21371.2| beta-galactosidase [Sandersonia aurantiaca]            258   9e-94
gb|ABK24373.1| unknown [Picea sitchensis]                             254   1e-93

>ref|XP_002317239.1| predicted protein [Populus trichocarpa] gi|222860304|gb|EEE97851.1|
            predicted protein [Populus trichocarpa]
          Length = 849

 Score =  360 bits (923), Expect(2) = e-140
 Identities = 160/225 (71%), Positives = 196/225 (87%), Gaps = 1/225 (0%)
 Frame = +1

Query: 1    VESLGHAALIFVNNKVVGFSYGNHDNANFTFNKKIKLKQGNNSVALLSMMIGLQNYGPWF 180
            +ESLGHAAL+FVN + V F YGNHD+A+F+  ++I L++GNN++ +LSM+IG+QNYGPWF
Sbjct: 507  IESLGHAALVFVNKRFVAFGYGNHDDASFSLTREISLEEGNNTLDVLSMLIGVQNYGPWF 566

Query: 181  DVAGAGIFSVFLIDFN-TKDDLSSREWTYQVGLEGEYLGLDKSSLANSSLWTSGMDLPIN 357
            DV GAGI SVFL+D + +K DLSS +WTYQVGLEGEYLGLD  SLANSSLW+ G  LP+N
Sbjct: 567  DVQGAGIHSVFLVDLHKSKKDLSSGKWTYQVGLEGEYLGLDNVSLANSSLWSQGTSLPVN 626

Query: 358  ETLIWYKTSFIAPEGNGPLSLNLASMGKGQVWVNGQSIGRYWSAYLAPSTGCNNSCDYRG 537
            ++LIWYK + IAPEGNGPL+LNLASMGKGQ W+NGQSIGRYWSAYL+PS GC ++CDYRG
Sbjct: 627  KSLIWYKATIIAPEGNGPLALNLASMGKGQAWINGQSIGRYWSAYLSPSAGCTDNCDYRG 686

Query: 538  SYDASKCLKNCGQPAQILYHVPRSWVHSGENLLVLHEEIGGDPSK 672
            +Y++ KC K CGQPAQ LYH+PR+WVH GENLLVLHEE+GGDPS+
Sbjct: 687  AYNSFKCQKKCGQPAQTLYHIPRTWVHPGENLLVLHEELGGDPSQ 731



 Score =  165 bits (418), Expect(2) = e-140
 Identities = 76/119 (63%), Positives = 94/119 (78%)
 Frame = +2

Query: 671  KISVLTRTDQEICSLVSESDPPAVDSWKPNSEVMSAIPEVRLSCEQGRHVSSINFASFGT 850
            +IS+LTRT Q+ICS+VSE DPP  DSWKPN E MS  PEVRL+CE G H+++INFASFGT
Sbjct: 731  QISLLTRTGQDICSIVSEDDPPPADSWKPNLEFMSQSPEVRLTCEHGWHIAAINFASFGT 790

Query: 851  PTGQCGKLSHGLCYAQNVLQIVQEACIGREHCSVPVSTTLLGDPCPGVLKSLAVEALCT 1027
            P G+CG  + G C+A ++L IVQ+ACIG E CS+P+S   LGDPCPGV+K   VEALC+
Sbjct: 791  PEGKCGTFTPGNCHA-DMLTIVQKACIGHERCSIPISAAKLGDPCPGVVKRFVVEALCS 848


>ref|XP_002521428.1| beta-galactosidase, putative [Ricinus communis]
            gi|223539327|gb|EEF40918.1| beta-galactosidase, putative
            [Ricinus communis]
          Length = 841

 Score =  357 bits (916), Expect(2) = e-137
 Identities = 165/225 (73%), Positives = 192/225 (85%), Gaps = 1/225 (0%)
 Frame = +1

Query: 1    VESLGHAALIFVNNKVVGFSYGNHDNANFTFNKKIKLKQGNNSVALLSMMIGLQNYGPWF 180
            +ESLGHAAL+FVN  +VG  YGNHD+A+F+  +KI L +GNN++ LLSMMIG+QNYGPWF
Sbjct: 500  IESLGHAALVFVNKVLVG-KYGNHDDASFSLTEKISLIEGNNTLDLLSMMIGVQNYGPWF 558

Query: 181  DVAGAGIFSVFLI-DFNTKDDLSSREWTYQVGLEGEYLGLDKSSLANSSLWTSGMDLPIN 357
            DV GAGI++V L+     K DLSS +WTYQVGLEGEY GLDK SLANSSLWT G   PIN
Sbjct: 559  DVQGAGIYAVLLVGQSKVKIDLSSEKWTYQVGLEGEYFGLDKVSLANSSLWTQGASPPIN 618

Query: 358  ETLIWYKTSFIAPEGNGPLSLNLASMGKGQVWVNGQSIGRYWSAYLAPSTGCNNSCDYRG 537
            ++LIWYK +F+APEG GPL+LNLA MGKGQ WVNGQSIGRYW AYL+PSTGCN+SCDYRG
Sbjct: 619  KSLIWYKGTFVAPEGKGPLALNLAGMGKGQAWVNGQSIGRYWPAYLSPSTGCNDSCDYRG 678

Query: 538  SYDASKCLKNCGQPAQILYHVPRSWVHSGENLLVLHEEIGGDPSK 672
            +YD+ KCLK CGQPAQ LYH+PR+WVH GENLLVLHEE+GGDPSK
Sbjct: 679  AYDSFKCLKKCGQPAQTLYHIPRTWVHPGENLLVLHEELGGDPSK 723



 Score =  160 bits (406), Expect(2) = e-137
 Identities = 78/119 (65%), Positives = 91/119 (76%)
 Frame = +2

Query: 671  KISVLTRTDQEICSLVSESDPPAVDSWKPNSEVMSAIPEVRLSCEQGRHVSSINFASFGT 850
            KISVLTRT  EICS+VSE DPP  DSWK +SE  S  PEVRL+CEQG H+ SINFASFGT
Sbjct: 723  KISVLTRTGHEICSIVSEDDPPPADSWKSSSEFKSQNPEVRLTCEQGWHIKSINFASFGT 782

Query: 851  PTGQCGKLSHGLCYAQNVLQIVQEACIGREHCSVPVSTTLLGDPCPGVLKSLAVEALCT 1027
            P G CG  + G C+A ++L IVQ+ACIG+E CS+ +S   LGDPCPGVLK  AVEA C+
Sbjct: 783  PAGICGTFNPGSCHA-DMLDIVQKACIGQEGCSISISAANLGDPCPGVLKRFAVEARCS 840


>ref|XP_003538054.1| PREDICTED: beta-galactosidase 8-like [Glycine max]
          Length = 836

 Score =  254 bits (649), Expect(2) = 4e-95
 Identities = 119/227 (52%), Positives = 153/227 (67%), Gaps = 3/227 (1%)
 Frame = +1

Query: 1    VESLGHAALIFVNNKVVGFSYGNHDNANFTFNKKIKLKQGNNSVALLSMMIGLQNYGPWF 180
            ++SLGHA   F+N K+ G   GNH+ AN   +  I L  G N++ LLS+ +GLQNYG +F
Sbjct: 493  IKSLGHALHAFINGKLAGSGTGNHEKANVEVDIPITLVSGKNTIDLLSLTVGLQNYGAFF 552

Query: 181  DVAGAGIFSVFLIDF---NTKDDLSSREWTYQVGLEGEYLGLDKSSLANSSLWTSGMDLP 351
            D  GAGI    ++      +  DLSS++WTYQVGL+ E LGL       S  W S   LP
Sbjct: 553  DTWGAGITGPVILKCLKNGSNVDLSSKQWTYQVGLKNEDLGLSSGC---SGQWNSQSTLP 609

Query: 352  INETLIWYKTSFIAPEGNGPLSLNLASMGKGQVWVNGQSIGRYWSAYLAPSTGCNNSCDY 531
             N+ L WYKT+F+AP GN P++++   MGKG+ WVNGQSIGRYW  Y +P  GC +SC+Y
Sbjct: 610  TNQPLTWYKTNFVAPSGNNPVAIDFTGMGKGEAWVNGQSIGRYWPTYASPKGGCTDSCNY 669

Query: 532  RGSYDASKCLKNCGQPAQILYHVPRSWVHSGENLLVLHEEIGGDPSK 672
            RG+YDASKCLKNCG+P+Q LYHVPRSW+    N LVL EE GG+P +
Sbjct: 670  RGAYDASKCLKNCGKPSQTLYHVPRSWLRPDRNTLVLFEESGGNPKQ 716



 Score =  122 bits (305), Expect(2) = 4e-95
 Identities = 63/121 (52%), Positives = 73/121 (60%), Gaps = 2/121 (1%)
 Frame = +2

Query: 668  QKISVLTRTDQEICSLVSESDPPAVDSWKPNSEV-MSAIPEVRLSCEQGRHV-SSINFAS 841
            ++IS  T+    +CS VSES PP VDSW  N+E     +P V L C     V SSI FAS
Sbjct: 715  KQISFATKQIGSVCSHVSESHPPPVDSWNSNTESGRKVVPVVSLECPYPNQVVSSIKFAS 774

Query: 842  FGTPTGQCGKLSHGLCYAQNVLQIVQEACIGREHCSVPVSTTLLGDPCPGVLKSLAVEAL 1021
            FGTP G CG   HGLC +   L IVQ+ACIG   C + +S    GDPC GV KSLAVEA 
Sbjct: 775  FGTPLGTCGNFKHGLCSSNKALSIVQKACIGSSSCRIELSVNTFGDPCKGVAKSLAVEAS 834

Query: 1022 C 1024
            C
Sbjct: 835  C 835


>gb|AAQ21371.2| beta-galactosidase [Sandersonia aurantiaca]
          Length = 818

 Score =  258 bits (658), Expect(2) = 9e-94
 Identities = 126/224 (56%), Positives = 156/224 (69%), Gaps = 1/224 (0%)
 Frame = +1

Query: 4    ESLGHAALIFVNNKVVGFSYGNHDNANFTFNKKIKLKQGNNSVALLSMMIGLQNYGPWFD 183
            ESLGH    FVN K+ G   GN  NA   F K I L  GNNS+ LLS  +GLQNYG +FD
Sbjct: 476  ESLGHVLHAFVNGKLAGSGIGNSGNAKIIFEKLIMLTPGNNSIDLLSATVGLQNYGAFFD 535

Query: 184  VAGAGIFS-VFLIDFNTKDDLSSREWTYQVGLEGEYLGLDKSSLANSSLWTSGMDLPINE 360
            + GAGI   V L   N   DLSS  WTYQ+GL+GE L L ++S  + S W S   LP N+
Sbjct: 536  LMGAGITGPVKLKGQNGTLDLSSNAWTYQIGLKGEDLSLHENS-GDVSQWISESTLPKNQ 594

Query: 361  TLIWYKTSFIAPEGNGPLSLNLASMGKGQVWVNGQSIGRYWSAYLAPSTGCNNSCDYRGS 540
             LIWYKT+F AP+GN P++++   MGKG+ WVNGQSIGRYW  Y +P  GC+ +C+YRG 
Sbjct: 595  PLIWYKTTFNAPDGNDPVAIDFTGMGKGEAWVNGQSIGRYWPTYSSPQNGCSTACNYRGP 654

Query: 541  YDASKCLKNCGQPAQILYHVPRSWVHSGENLLVLHEEIGGDPSK 672
            Y ASKC+KNCG+P+QILYHVPRS++ S  N LVL EE+GGDP++
Sbjct: 655  YSASKCIKNCGKPSQILYHVPRSFIQSESNTLVLFEEMGGDPTQ 698



 Score =  114 bits (284), Expect(2) = 9e-94
 Identities = 57/121 (47%), Positives = 79/121 (65%), Gaps = 2/121 (1%)
 Frame = +2

Query: 671  KISVLTRTDQEICSLVSESDPPAVDSWKP-NSEVMSAIPEVRLSCEQGRHV-SSINFASF 844
            +IS+ T+    +C+ VSES P  VD+W     +   + P ++L C     V SSI FASF
Sbjct: 698  QISLATKQMTSLCAHVSESHPAPVDTWLSLQQKGKKSGPTIQLECPYPNQVISSIKFASF 757

Query: 845  GTPTGQCGKLSHGLCYAQNVLQIVQEACIGREHCSVPVSTTLLGDPCPGVLKSLAVEALC 1024
            GTP+G CG  +H  C + +VL +VQ+AC+G + CSV +S+  LGDPC GV+KSLAVEA C
Sbjct: 758  GTPSGMCGSFNHSQCSSASVLAVVQKACVGSKRCSVGISSKTLGDPCRGVIKSLAVEAAC 817

Query: 1025 T 1027
            +
Sbjct: 818  S 818


>gb|ABK24373.1| unknown [Picea sitchensis]
          Length = 861

 Score =  254 bits (649), Expect(2) = 1e-93
 Identities = 118/226 (52%), Positives = 156/226 (69%), Gaps = 2/226 (0%)
 Frame = +1

Query: 1    VESLGHAALIFVNNKVVGFSYGNHDNANFTFNKKIKLKQGNNSVALLSMMIGLQNYGPWF 180
            V+SLGHA  +F+N +  G   G+  ++       I LK G N++ LLS+ +GLQNYG +F
Sbjct: 513  VQSLGHALHVFINGEFAGRGAGSSSSSKIALQTPITLKSGKNNIDLLSITVGLQNYGSFF 572

Query: 181  DVAGAGIFS-VFLIDFNTKD-DLSSREWTYQVGLEGEYLGLDKSSLANSSLWTSGMDLPI 354
            D  GAGI   V L  F   + DLS+++WTYQ+GL GE LG+       S+ W +G DLP 
Sbjct: 573  DTWGAGITGPVILQGFKDGEHDLSTQQWTYQIGLTGEQLGIYSGDTKASAQWVAGSDLPT 632

Query: 355  NETLIWYKTSFIAPEGNGPLSLNLASMGKGQVWVNGQSIGRYWSAYLAPSTGCNNSCDYR 534
             + +IWYKT+F AP GN P++LNL  MGKG  WVNGQSIGRYW +Y+A  +GC +SCDYR
Sbjct: 633  KQPMIWYKTNFDAPSGNDPVALNLLGMGKGVAWVNGQSIGRYWPSYIASQSGCTDSCDYR 692

Query: 535  GSYDASKCLKNCGQPAQILYHVPRSWVHSGENLLVLHEEIGGDPSK 672
            G+Y ++KC  NCGQP+Q LYHVPRSW+    N+LVL EE+GGDP++
Sbjct: 693  GAYSSTKCQTNCGQPSQKLYHVPRSWIQPTGNVLVLFEELGGDPTQ 738



 Score =  117 bits (292), Expect(2) = 1e-93
 Identities = 60/124 (48%), Positives = 79/124 (63%), Gaps = 5/124 (4%)
 Frame = +2

Query: 671  KISVLTRTDQEICSLVSESDPPAVDSWKPNS----EVMSAIPEVRLSCEQGRH-VSSINF 835
            +IS +TR+   +C+ VSE+  P VDSWK ++    EV     E++L C   RH + SI F
Sbjct: 738  QISFMTRSVGSLCAQVSETHLPPVDSWKSSATSGLEVNKPKAELQLHCPSSRHLIKSIKF 797

Query: 836  ASFGTPTGQCGKLSHGLCYAQNVLQIVQEACIGREHCSVPVSTTLLGDPCPGVLKSLAVE 1015
            ASFGT  G CG  ++G C   + + IV+EACIGRE CSV VS    GDPC G +K+LAVE
Sbjct: 798  ASFGTSKGSCGSFTYGHCNTNSTMSIVEEACIGRESCSVEVSIEKFGDPCKGTVKNLAVE 857

Query: 1016 ALCT 1027
            A C+
Sbjct: 858  ASCS 861


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