BLASTX nr result

ID: Coptis25_contig00018964 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018964
         (582 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003608258.1| Disease resistance protein [Medicago truncat...    59   6e-07
emb|CBI29678.3| unnamed protein product [Vitis vinifera]               59   6e-07
ref|XP_003608264.1| Disease resistance protein RPS5 [Medicago tr...    57   2e-06
gb|EEC84228.1| hypothetical protein OsI_30648 [Oryza sativa Indi...    55   7e-06
emb|CBI29677.3| unnamed protein product [Vitis vinifera]               55   9e-06

>ref|XP_003608258.1| Disease resistance protein [Medicago truncatula]
            gi|355509313|gb|AES90455.1| Disease resistance protein
            [Medicago truncatula]
          Length = 896

 Score = 58.9 bits (141), Expect = 6e-07
 Identities = 35/97 (36%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
 Frame = -2

Query: 581  ESGDVEKDKASHPHMKDFSLFHLPELSSFSGSNSLVVDWPSAKSLQVNECPNLKRLPLGT 402
            E+ D E+      ++K   LF++P+L S    +   +D+PS K  +V +CPNL++LPL +
Sbjct: 802  EAKDDEQADNIFTNLKILGLFYMPKLVSI---HKRALDFPSLKRFEVAKCPNLRKLPLNS 858

Query: 401  HSVPKLENFAI-SDQEWFDKLEWYDQRIQAKLQTLLE 294
                K    AI  + EW+DKLEW D  I   L+  L+
Sbjct: 859  SFALKNNLIAIKGETEWWDKLEWDDTIIPTLLRPKLQ 895


>emb|CBI29678.3| unnamed protein product [Vitis vinifera]
          Length = 966

 Score = 58.9 bits (141), Expect = 6e-07
 Identities = 34/94 (36%), Positives = 50/94 (53%)
 Frame = -2

Query: 581  ESGDVEKDKASHPHMKDFSLFHLPELSSFSGSNSLVVDWPSAKSLQVNECPNLKRLPLGT 402
            ES ++  +  S P +K   L  LP+L S   S+SL  +WPS +S++++ C  LKRLP   
Sbjct: 872  ESENIGLESCSLPRLKTLVLLDLPKLKSIWVSDSL--EWPSLQSIKISMCDMLKRLPFNI 929

Query: 401  HSVPKLENFAISDQEWFDKLEWYDQRIQAKLQTL 300
             +  KL       Q W+  L W D  I+ +LQ L
Sbjct: 930  ANAAKL-RLIEGQQSWWGALVWEDDAIKQRLQPL 962


>ref|XP_003608264.1| Disease resistance protein RPS5 [Medicago truncatula]
           gi|87240477|gb|ABD32335.1| Disease resistance protein;
           Heat shock protein DnaJ, N-terminal; AAA ATPase
           [Medicago truncatula] gi|355509319|gb|AES90461.1|
           Disease resistance protein RPS5 [Medicago truncatula]
          Length = 806

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
 Frame = -2

Query: 581 ESGDVEKDKASHPHMKDFSLFHLPELSSFSGSNSLVVDWPSAKSLQVNECPNLKRLPLGT 402
           ++G   K+     ++ D  L+ +P+L S    +   +D+PS K ++V +CPNL++LP  +
Sbjct: 703 QAGSDSKNDMIFANLTDLCLYGMPKLVSI---HKRALDFPSLKRIKVTDCPNLRKLPFNS 759

Query: 401 HSVPKLENFAI-SDQEWFDKLEWYDQRIQAKLQTLL 297
               K+   AI  + EW+D LEW D  I   L+  L
Sbjct: 760 RFAFKINLIAIQGETEWWDNLEWDDTIIPTLLRPKL 795


>gb|EEC84228.1| hypothetical protein OsI_30648 [Oryza sativa Indica Group]
          Length = 889

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 35/88 (39%), Positives = 50/88 (56%), Gaps = 9/88 (10%)
 Frame = -2

Query: 527  SLFHLPELSS--FSGSNSLV------VDWPSAKSLQVNECPNLKRLPLGTHSV-PKLENF 375
            S+   P L S  F+ ++ LV      V +PS KSL+V  C NLKRLP    S+ PKL+  
Sbjct: 800  SIDTFPRLVSMLFANNDGLVSICDSDVTFPSLKSLRVTNCENLKRLPFRQQSLPPKLQVI 859

Query: 374  AISDQEWFDKLEWYDQRIQAKLQTLLEM 291
                 EW+D LEW ++ I+  L+ LL++
Sbjct: 860  YSDSVEWWDNLEWEEEGIRPMLEPLLKI 887


>emb|CBI29677.3| unnamed protein product [Vitis vinifera]
          Length = 979

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 28/83 (33%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
 Frame = -2

Query: 545  PHMKDFSLFHLPELSSFSGSNSLVVDWPSAKSLQVNECPNLKRLPLGTHSVPKLENFAIS 366
            P +K  +L +L  L+S  G + L  +W S + +++++CP LKRLP    +  KL +    
Sbjct: 896  PRLKTLTLLNLKTLTSIWGGDPL--EWRSLQVIEISKCPKLKRLPFNNDNATKLRSIK-G 952

Query: 365  DQEWFDKLEWYDQ-RIQAKLQTL 300
             +EW++ LEW D   I+ +L++L
Sbjct: 953  QREWWEALEWKDDAAIEQRLESL 975


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