BLASTX nr result

ID: Coptis25_contig00018962 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018962
         (549 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29678.3| unnamed protein product [Vitis vinifera]               76   4e-12
ref|XP_002521791.1| conserved hypothetical protein [Ricinus comm...    75   7e-12
ref|XP_003634660.1| PREDICTED: disease resistance protein At4g27...    73   3e-11
ref|XP_003608258.1| Disease resistance protein [Medicago truncat...    73   3e-11
ref|XP_002278676.2| PREDICTED: probable disease resistance prote...    72   4e-11

>emb|CBI29678.3| unnamed protein product [Vitis vinifera]
          Length = 966

 Score = 75.9 bits (185), Expect = 4e-12
 Identities = 47/140 (33%), Positives = 72/140 (51%)
 Frame = -1

Query: 471  LTNLFIANCMKLKHLFPLRVFQHLSKLEKMCVMRCSALEILFPDDSDIKSGDVEKDKASH 292
            LT+L +  C +LK +F   + Q L +L+ + V  C  +E +      ++S ++  +  S 
Sbjct: 829  LTSLTLVKCPELKKIFSNGMIQQLFELQHLRVEECDQIEEII-----MESENIGLESCSL 883

Query: 291  PLLKDFSLFHLPELSSFSERDSLVVDWPSTKSLQVIECPNLKRLPLGTHSVPKLEKFAIP 112
            P LK   L  LP+L S    DSL  +WPS +S+++  C  LKRLP    +  KL +    
Sbjct: 884  PRLKTLVLLDLPKLKSIWVSDSL--EWPSLQSIKISMCDMLKRLPFNIANAAKL-RLIEG 940

Query: 111  DQEWFNKLEWDDQRIKAELQ 52
             Q W+  L W+D  IK  LQ
Sbjct: 941  QQSWWGALVWEDDAIKQRLQ 960


>ref|XP_002521791.1| conserved hypothetical protein [Ricinus communis]
           gi|223539004|gb|EEF40601.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 311

 Score = 75.1 bits (183), Expect = 7e-12
 Identities = 43/131 (32%), Positives = 70/131 (53%)
 Frame = -1

Query: 495 PPSPIFCNLTNLFIANCMKLKHLFPLRVFQHLSKLEKMCVMRCSALEILFPDDSDIKSGD 316
           P S  F NL  L +  C +LKHLF   + ++L KLE + +  C  +E++  ++     G+
Sbjct: 179 PESTAFENLKELNVYLCHRLKHLFSPLMAKYLVKLEAVRITCCHLMEVIVAEEK--LEGE 236

Query: 315 VEKDKASHPLLKDFSLFHLPELSSFSERDSLVVDWPSTKSLQVIECPNLKRLPLGTHSVP 136
           V  +K   P L+   L  L  L SFS   S+++++PS + L +IEC  ++    G  + P
Sbjct: 237 VRSEKVIFPQLRLLRLESLFNLESFSIDSSIIIEFPSLEHLYLIECYRMETFSYGLVAAP 296

Query: 135 KLEKFAIPDQE 103
           KL+K  + D E
Sbjct: 297 KLKKIDVEDHE 307


>ref|XP_003634660.1| PREDICTED: disease resistance protein At4g27190-like [Vitis vinifera]
          Length = 1003

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 49/149 (32%), Positives = 71/149 (47%), Gaps = 1/149 (0%)
 Frame = -1

Query: 480  FCNLTNLFIANCMKLKHLFPLRVF-QHLSKLEKMCVMRCSALEILFPDDSDIKSGDVEKD 304
            F  L  + +A C KLK+L     F Q L KLE +C+  C  L  +F       SG     
Sbjct: 860  FSRLKGMRVAGCPKLKYLLSCDDFTQPLEKLELICLNACDDLSAMFI----YSSGQTSMP 915

Query: 303  KASHPLLKDFSLFHLPELSSFSERDSLVVDWPSTKSLQVIECPNLKRLPLGTHSVPKLEK 124
                P L+  +L  LP L + S ++     W   + + V EC NLK+LPL   S   L++
Sbjct: 916  YPVAPNLQKIALSLLPNLKTLSRQEET---WQHLEHIYVRECRNLKKLPLNEQSANTLKE 972

Query: 123  FAIPDQEWFNKLEWDDQRIKAELQTRLEV 37
                ++EW+ +LEWDD    + LQ   +V
Sbjct: 973  IR-GEEEWWKQLEWDDDVTSSTLQPLFKV 1000


>ref|XP_003608258.1| Disease resistance protein [Medicago truncatula]
            gi|355509313|gb|AES90455.1| Disease resistance protein
            [Medicago truncatula]
          Length = 896

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 55/168 (32%), Positives = 83/168 (49%), Gaps = 1/168 (0%)
 Frame = -1

Query: 540  DGVEQGSSSTRLCYLPPSPIFCNLTNLFIANCMKLKHLFPLRVFQHLSKLEKMCVMRCSA 361
            D +  GSS T  C+L        L  + I  C  + HL  LR   +   LE + V  C +
Sbjct: 745  DSLVDGSSITDKCHLGM------LRQVCINFCGSITHLTWLR---YAPLLEVLVVSVCDS 795

Query: 360  LEILFPDDSDIKSGDVEKDKASHPLLKDFSLFHLPELSSFSERDSLVVDWPSTKSLQVIE 181
            +E +  +  D +  D          LK   LF++P+L S  +R    +D+PS K  +V +
Sbjct: 796  IEEVVKEAKDDEQAD-----NIFTNLKILGLFYMPKLVSIHKR---ALDFPSLKRFEVAK 847

Query: 180  CPNLKRLPLGTHSVPKLEKFAIP-DQEWFNKLEWDDQRIKAELQTRLE 40
            CPNL++LPL +    K    AI  + EW++KLEWDD  I   L+ +L+
Sbjct: 848  CPNLRKLPLNSSFALKNNLIAIKGETEWWDKLEWDDTIIPTLLRPKLQ 895


>ref|XP_002278676.2| PREDICTED: probable disease resistance protein At5g63020-like [Vitis
            vinifera]
          Length = 895

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 45/143 (31%), Positives = 77/143 (53%)
 Frame = -1

Query: 492  PSPIFCNLTNLFIANCMKLKHLFPLRVFQHLSKLEKMCVMRCSALEILFPDDSDIKSGDV 313
            P+ IF NL ++F+    +L  L  L    ++  LE + V RC +++ +  D S+     V
Sbjct: 738  PNSIFYNLRSVFVD---QLPKLLDLTWLIYIPSLELLSVHRCESMKEVIGDASE-----V 789

Query: 312  EKDKASHPLLKDFSLFHLPELSSFSERDSLVVDWPSTKSLQVIECPNLKRLPLGTHSVPK 133
             ++      L+  +L +LP L S S R    + +PS K+L+V +CPNL++LPL ++S   
Sbjct: 790  PENLGIFSRLEGLTLHYLPNLRSISRR---ALPFPSLKTLRVTKCPNLRKLPLDSNSARN 846

Query: 132  LEKFAIPDQEWFNKLEWDDQRIK 64
              K      EW+  L+W+D+ I+
Sbjct: 847  SLKIIEGTSEWWRGLQWEDETIQ 869


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