BLASTX nr result

ID: Coptis25_contig00018956 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018956
         (542 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282834.1| PREDICTED: uncharacterized protein LOC100267...    84   2e-14
ref|XP_002523266.1| conserved hypothetical protein [Ricinus comm...    79   3e-13
ref|XP_002317372.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-11
gb|AFK43606.1| unknown [Lotus japonicus]                               69   4e-10
ref|XP_004146244.1| PREDICTED: uncharacterized protein LOC101221...    68   8e-10

>ref|XP_002282834.1| PREDICTED: uncharacterized protein LOC100267434 [Vitis vinifera]
           gi|302142945|emb|CBI20240.3| unnamed protein product
           [Vitis vinifera]
          Length = 277

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 41/53 (77%), Positives = 45/53 (84%)
 Frame = -2

Query: 433 RTIINGICYLATFVFGINSVGLILYSGQLALNSFMDGSKSEATSSQDEGKLGT 275
           RTIING+CYLATFVFGINSVGL LYSGQLALNSFM+GS SE T  + E +L T
Sbjct: 198 RTIINGLCYLATFVFGINSVGLFLYSGQLALNSFMEGSTSEETQIKGEEQLST 250


>ref|XP_002523266.1| conserved hypothetical protein [Ricinus communis]
           gi|223537479|gb|EEF39105.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 285

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 37/53 (69%), Positives = 45/53 (84%)
 Frame = -2

Query: 433 RTIINGICYLATFVFGINSVGLILYSGQLALNSFMDGSKSEATSSQDEGKLGT 275
           RTIING+CYLATFVFG+NSVGL LYSGQLA+NSFM+GS SE + S+   + G+
Sbjct: 206 RTIINGLCYLATFVFGLNSVGLFLYSGQLAINSFMEGSTSEESESKGNEQSGS 258


>ref|XP_002317372.1| predicted protein [Populus trichocarpa] gi|222860437|gb|EEE97984.1|
           predicted protein [Populus trichocarpa]
          Length = 211

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 35/58 (60%), Positives = 42/58 (72%)
 Frame = -2

Query: 433 RTIINGICYLATFVFGINSVGLILYSGQLALNSFMDGSKSEATSSQDEGKLGTNPVTT 260
           RTI+NG+CYLATFVFGINSVGL LYS QLA NS M+    E T S   G+ G++  T+
Sbjct: 139 RTIVNGLCYLATFVFGINSVGLFLYSAQLAFNSLMEAGTDEVTESTTSGQSGSSNSTS 196


>gb|AFK43606.1| unknown [Lotus japonicus]
          Length = 251

 Score = 69.3 bits (168), Expect = 4e-10
 Identities = 33/58 (56%), Positives = 44/58 (75%)
 Frame = -2

Query: 433 RTIINGICYLATFVFGINSVGLILYSGQLALNSFMDGSKSEATSSQDEGKLGTNPVTT 260
           RTIING+CYLATFV+GINSVGL+LYSGQLA+N+F  G   + T  +   + G++  +T
Sbjct: 177 RTIINGLCYLATFVYGINSVGLLLYSGQLAMNTFEGGPSGKETEKRILEQSGSSNSST 234


>ref|XP_004146244.1| PREDICTED: uncharacterized protein LOC101221005 [Cucumis sativus]
           gi|449495512|ref|XP_004159863.1| PREDICTED:
           uncharacterized LOC101221005 [Cucumis sativus]
          Length = 282

 Score = 68.2 bits (165), Expect = 8e-10
 Identities = 34/50 (68%), Positives = 42/50 (84%), Gaps = 2/50 (4%)
 Frame = -2

Query: 433 RTIINGICYLATFVFGINSVGLILYSGQLALNSFM-DGSK-SEATSSQDE 290
           RTI+NG+CYLATFVFGIN++GL LYSGQLA+NS M +GSK +E  +  DE
Sbjct: 203 RTIVNGLCYLATFVFGINAIGLFLYSGQLAMNSVMEEGSKDTEPKAKSDE 252


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