BLASTX nr result

ID: Coptis25_contig00018942 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018942
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634438.1| PREDICTED: probable inactive receptor kinase...    80   2e-13
emb|CAN61022.1| hypothetical protein VITISV_001142 [Vitis vinifera]    80   2e-13
emb|CBI19482.3| unnamed protein product [Vitis vinifera]               79   5e-13
ref|XP_002283167.1| PREDICTED: probable inactive receptor kinase...    73   2e-11
ref|XP_002327172.1| predicted protein [Populus trichocarpa] gi|2...    73   3e-11

>ref|XP_003634438.1| PREDICTED: probable inactive receptor kinase At5g67200-like [Vitis
           vinifera]
          Length = 687

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 37/52 (71%), Positives = 44/52 (84%)
 Frame = -3

Query: 315 NRLAMLVEVAITCRVQSPEQRPSMWQVMKMIQEIKETVMMEDNDLVPSMGFS 160
           NR+ ML+EVAI C V SPEQRP+MWQV+KMIQEIKE+V+MEDN+L P  G S
Sbjct: 636 NRMGMLLEVAIACSVTSPEQRPTMWQVLKMIQEIKESVLMEDNELDPLTGLS 687


>emb|CAN61022.1| hypothetical protein VITISV_001142 [Vitis vinifera]
          Length = 662

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 37/52 (71%), Positives = 44/52 (84%)
 Frame = -3

Query: 315 NRLAMLVEVAITCRVQSPEQRPSMWQVMKMIQEIKETVMMEDNDLVPSMGFS 160
           NR+ ML+EVAI C V SPEQRP+MWQV+KMIQEIKE+V+MEDN+L P  G S
Sbjct: 611 NRMGMLLEVAIACSVTSPEQRPTMWQVLKMIQEIKESVLMEDNELDPLTGLS 662


>emb|CBI19482.3| unnamed protein product [Vitis vinifera]
          Length = 675

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 36/50 (72%), Positives = 43/50 (86%)
 Frame = -3

Query: 315 NRLAMLVEVAITCRVQSPEQRPSMWQVMKMIQEIKETVMMEDNDLVPSMG 166
           NR+ ML+EVAI C V SPEQRP+MWQV+KMIQEIKE+V+MEDN+L P  G
Sbjct: 611 NRMGMLLEVAIACSVTSPEQRPTMWQVLKMIQEIKESVLMEDNELDPLTG 660


>ref|XP_002283167.1| PREDICTED: probable inactive receptor kinase At5g67200 isoform 1
           [Vitis vinifera]
          Length = 671

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 35/52 (67%), Positives = 41/52 (78%)
 Frame = -3

Query: 315 NRLAMLVEVAITCRVQSPEQRPSMWQVMKMIQEIKETVMMEDNDLVPSMGFS 160
           NRLA+LVEVA  C + SPEQRP+MWQV KMIQEIK ++M+EDN    S GFS
Sbjct: 620 NRLALLVEVASVCSLTSPEQRPAMWQVSKMIQEIKNSIMVEDNSGGASFGFS 671


>ref|XP_002327172.1| predicted protein [Populus trichocarpa] gi|222835487|gb|EEE73922.1|
           predicted protein [Populus trichocarpa]
          Length = 646

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 32/45 (71%), Positives = 41/45 (91%)
 Frame = -3

Query: 315 NRLAMLVEVAITCRVQSPEQRPSMWQVMKMIQEIKETVMMEDNDL 181
           NRL ML+EVAI C + SPEQRP+MWQV+KM+QEIKETV++ED++L
Sbjct: 595 NRLEMLLEVAIACSLTSPEQRPTMWQVLKMLQEIKETVLLEDSEL 639


Top