BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018940
         (1144 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275251.1| PREDICTED: cullin-3A [Vitis vinifera]             596   e-168
ref|XP_002283300.1| PREDICTED: cullin-3B [Vitis vinifera] gi|147...   595   e-168
ref|XP_002315795.1| predicted protein [Populus trichocarpa] gi|2...   590   e-166
ref|XP_002311598.1| predicted protein [Populus trichocarpa] gi|2...   584   e-164
ref|XP_003532060.1| PREDICTED: cullin-3A-like [Glycine max]           581   e-163

>ref|XP_002275251.1| PREDICTED: cullin-3A [Vitis vinifera]
          Length = 733

 Score =  596 bits (1537), Expect = e-168
 Identities = 290/359 (80%), Positives = 327/359 (91%)
 Frame = +1

Query: 67   MQQAKKRNFQIEAFKHKVVVDPKYSDKTWKVLEHAIKEIYNHNASGLSFEELYRNAYNMV 246
            M   KKRNFQIEAFKH+VVVDPKY+DKTWK+LEHAI EIYNHNASGLSFEELYRNAYNMV
Sbjct: 1    MGSQKKRNFQIEAFKHRVVVDPKYADKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMV 60

Query: 247  LHKFGDKLYSGLVTTMTTHLKQVCALIESAQGGLFLEELDRKWTDHNKALQMIRDILMYM 426
            LHKFG+KLYSGLV+TMT+HLK +   IE+AQGGLFLEEL+RKW DHNKALQMIRDILMYM
Sbjct: 61   LHKFGEKLYSGLVSTMTSHLKDISKFIEAAQGGLFLEELNRKWADHNKALQMIRDILMYM 120

Query: 427  DRTYIPNTQKTPVHVLGLNLWRDHIIRSSQIQNRLLNTLLELVQRERTGEVINRGLMRNL 606
            DRT+IP+T KTPVH LGLNLWRD+II SS+IQ RLLNTLLELV RER GEVINRGLMRN+
Sbjct: 121  DRTFIPSTHKTPVHELGLNLWRDNIIHSSKIQTRLLNTLLELVLRERNGEVINRGLMRNI 180

Query: 607  VQMLMDLGSSVYQEYFEKHFLGVSSNFYSVESQRFIECCDCGEYLKKAEIRLNEEMERVS 786
            ++MLMDLGSSVYQE FEK FL VS++FY VESQ+FIECCDC +YLKKAE RLNEEMERVS
Sbjct: 181  IKMLMDLGSSVYQEDFEKPFLEVSADFYRVESQKFIECCDCADYLKKAERRLNEEMERVS 240

Query: 787  HYLIARTEGKITNVVEKEMIANHMQRLVHMENSGLIKMLVDDKYEDLGRMYSLFCRVADG 966
             YL A++E KITNVVEKEMIANHM RLVHMENSGL+ ML+DDKY+DLGRMY+LF RV +G
Sbjct: 241  QYLDAKSEVKITNVVEKEMIANHMLRLVHMENSGLVNMLLDDKYDDLGRMYNLFRRVPNG 300

Query: 967  LSTLKDVLTSHLRETGKELVTDPERSKDPVDFVQRLLDEKDKYDKIIGLAFNNDKTFLN 1143
            LST+++V+TSH+R+TGK LVTDPER +DPV+FVQRLLDEKDKYD+IIG +FNNDKTF N
Sbjct: 301  LSTIREVMTSHIRDTGKHLVTDPERLRDPVEFVQRLLDEKDKYDRIIGSSFNNDKTFQN 359


>ref|XP_002283300.1| PREDICTED: cullin-3B [Vitis vinifera] gi|147833364|emb|CAN72935.1|
            hypothetical protein VITISV_020617 [Vitis vinifera]
          Length = 733

 Score =  595 bits (1533), Expect = e-168
 Identities = 291/359 (81%), Positives = 325/359 (90%)
 Frame = +1

Query: 67   MQQAKKRNFQIEAFKHKVVVDPKYSDKTWKVLEHAIKEIYNHNASGLSFEELYRNAYNMV 246
            M   KKRNFQIEAFKH+VVVDPKY++KTWK+LEHAI EIYNHNASGLSFEELYRNAYNMV
Sbjct: 1    MSTQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMV 60

Query: 247  LHKFGDKLYSGLVTTMTTHLKQVCALIESAQGGLFLEELDRKWTDHNKALQMIRDILMYM 426
            LHKFG+KLYSGLVTTMT HL+ +   IE+AQGGLFLEEL+RKW DHNKALQMIRDILMYM
Sbjct: 61   LHKFGEKLYSGLVTTMTHHLEVISKSIEAAQGGLFLEELNRKWADHNKALQMIRDILMYM 120

Query: 427  DRTYIPNTQKTPVHVLGLNLWRDHIIRSSQIQNRLLNTLLELVQRERTGEVINRGLMRNL 606
            DRT+IP+T KTPVH LGLNLWRD+II S++IQ RL +TLL+LV RERTGEVINRGLMRN+
Sbjct: 121  DRTFIPSTHKTPVHELGLNLWRDNIIHSAKIQTRLQDTLLDLVLRERTGEVINRGLMRNV 180

Query: 607  VQMLMDLGSSVYQEYFEKHFLGVSSNFYSVESQRFIECCDCGEYLKKAEIRLNEEMERVS 786
            ++MLMDLGSSVYQ+ FEKHFL VS++FY  ESQ+FIECCDCGEYLKKAE RLNEEMERVS
Sbjct: 181  IKMLMDLGSSVYQDDFEKHFLEVSADFYRAESQQFIECCDCGEYLKKAERRLNEEMERVS 240

Query: 787  HYLIARTEGKITNVVEKEMIANHMQRLVHMENSGLIKMLVDDKYEDLGRMYSLFCRVADG 966
            HYL A++E KIT+VVEKEM+ +HMQRLVHMENSGLI MLVDDKYEDLGRMYSLF RV +G
Sbjct: 241  HYLDAKSEAKITSVVEKEMVESHMQRLVHMENSGLINMLVDDKYEDLGRMYSLFRRVPNG 300

Query: 967  LSTLKDVLTSHLRETGKELVTDPERSKDPVDFVQRLLDEKDKYDKIIGLAFNNDKTFLN 1143
            L  ++DV+TSH+R TGK+LVTDPER KDPVDFVQRLLDEKDK DKII LAFNNDKTF N
Sbjct: 301  LFIIRDVMTSHIRSTGKQLVTDPERLKDPVDFVQRLLDEKDKNDKIINLAFNNDKTFQN 359


>ref|XP_002315795.1| predicted protein [Populus trichocarpa] gi|222864835|gb|EEF01966.1|
            predicted protein [Populus trichocarpa]
          Length = 733

 Score =  590 bits (1522), Expect = e-166
 Identities = 288/359 (80%), Positives = 324/359 (90%)
 Frame = +1

Query: 67   MQQAKKRNFQIEAFKHKVVVDPKYSDKTWKVLEHAIKEIYNHNASGLSFEELYRNAYNMV 246
            M   KKRNFQIEAFKH+VVVDPKY+DKTWK+LEHAI EIYNHNASGLSFEELYRNAYNMV
Sbjct: 1    MSNQKKRNFQIEAFKHRVVVDPKYADKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMV 60

Query: 247  LHKFGDKLYSGLVTTMTTHLKQVCALIESAQGGLFLEELDRKWTDHNKALQMIRDILMYM 426
            LHKFG+KLY+GLV TMT+HL+++   +E+AQG  FLEEL+RKW DHNKALQMIRDILMYM
Sbjct: 61   LHKFGEKLYNGLVATMTSHLREISKSVEAAQGDSFLEELNRKWNDHNKALQMIRDILMYM 120

Query: 427  DRTYIPNTQKTPVHVLGLNLWRDHIIRSSQIQNRLLNTLLELVQRERTGEVINRGLMRNL 606
            DRTYIP+T KTPVH LGLNLWRD+II SS+IQ RL NTLLELV RERTGEVI+RGLMRN+
Sbjct: 121  DRTYIPSTHKTPVHELGLNLWRDNIIHSSKIQTRLQNTLLELVHRERTGEVIDRGLMRNI 180

Query: 607  VQMLMDLGSSVYQEYFEKHFLGVSSNFYSVESQRFIECCDCGEYLKKAEIRLNEEMERVS 786
            V+MLMDLGSSVYQE FEK FL VS+ FY  ESQ+FIECCDCG+YLKKAE RLNEE+ERV+
Sbjct: 181  VKMLMDLGSSVYQEDFEKPFLEVSAEFYRGESQKFIECCDCGDYLKKAEKRLNEEIERVT 240

Query: 787  HYLIARTEGKITNVVEKEMIANHMQRLVHMENSGLIKMLVDDKYEDLGRMYSLFCRVADG 966
            HYL +++E KITNVVEKEMIANHM RLVHMENSGL+ ML+DDKYEDLGRMY+LF RV +G
Sbjct: 241  HYLDSKSEVKITNVVEKEMIANHMLRLVHMENSGLVNMLLDDKYEDLGRMYNLFRRVPNG 300

Query: 967  LSTLKDVLTSHLRETGKELVTDPERSKDPVDFVQRLLDEKDKYDKIIGLAFNNDKTFLN 1143
            LST+++V+TSHLRETGK+LVTDPER KDPV+FVQRLLDEKDKYD II  AFNNDKTF N
Sbjct: 301  LSTIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDSIISNAFNNDKTFQN 359


>ref|XP_002311598.1| predicted protein [Populus trichocarpa] gi|222851418|gb|EEE88965.1|
            predicted protein [Populus trichocarpa]
          Length = 732

 Score =  584 bits (1505), Expect = e-164
 Identities = 285/359 (79%), Positives = 322/359 (89%)
 Frame = +1

Query: 67   MQQAKKRNFQIEAFKHKVVVDPKYSDKTWKVLEHAIKEIYNHNASGLSFEELYRNAYNMV 246
            M   KKRNFQI+AFKH+VVVDPKY+DKTWK+LEHAI EIYNHNASGLSFEELYRNAYNMV
Sbjct: 1    MSNQKKRNFQIDAFKHRVVVDPKYADKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMV 60

Query: 247  LHKFGDKLYSGLVTTMTTHLKQVCALIESAQGGLFLEELDRKWTDHNKALQMIRDILMYM 426
            LHKFG+KLY+GLV TMT+HLK++   IE+AQG  FLEEL+RKW DHNKALQMIRDILMYM
Sbjct: 61   LHKFGEKLYNGLVATMTSHLKEISKSIEAAQGDSFLEELNRKWNDHNKALQMIRDILMYM 120

Query: 427  DRTYIPNTQKTPVHVLGLNLWRDHIIRSSQIQNRLLNTLLELVQRERTGEVINRGLMRNL 606
            DRTYIP+  KTPVH LGLNLWRD+II SS+IQ RL NTLLELV RERTGEVI+RGLMRN+
Sbjct: 121  DRTYIPSVHKTPVHELGLNLWRDNIIHSSKIQTRLQNTLLELVHRERTGEVIDRGLMRNI 180

Query: 607  VQMLMDLGSSVYQEYFEKHFLGVSSNFYSVESQRFIECCDCGEYLKKAEIRLNEEMERVS 786
            V+MLMDLGSSVYQE FEK FL VS+ FYS ESQ+FIECCDCG+YLKKAE RLNEE+ERV+
Sbjct: 181  VKMLMDLGSSVYQEDFEKPFLEVSAEFYSGESQKFIECCDCGDYLKKAEKRLNEEIERVT 240

Query: 787  HYLIARTEGKITNVVEKEMIANHMQRLVHMENSGLIKMLVDDKYEDLGRMYSLFCRVADG 966
            HYL +++E +I NVVEKEMIANHM RLVHMENSGL+ ML+DDK++DLGRMY+LF RV DG
Sbjct: 241  HYLDSKSEVRINNVVEKEMIANHMLRLVHMENSGLVNMLLDDKFDDLGRMYNLFRRVPDG 300

Query: 967  LSTLKDVLTSHLRETGKELVTDPERSKDPVDFVQRLLDEKDKYDKIIGLAFNNDKTFLN 1143
            LST+++V+TSHLRETGK+LVTDPER KDPV+FVQ LLDEKDKYD II  AFNNDKTF N
Sbjct: 301  LSTIREVMTSHLRETGKQLVTDPERLKDPVEFVQCLLDEKDKYDSIISNAFNNDKTFQN 359


>ref|XP_003532060.1| PREDICTED: cullin-3A-like [Glycine max]
          Length = 732

 Score =  581 bits (1497), Expect = e-163
 Identities = 280/359 (77%), Positives = 318/359 (88%)
 Frame = +1

Query: 67   MQQAKKRNFQIEAFKHKVVVDPKYSDKTWKVLEHAIKEIYNHNASGLSFEELYRNAYNMV 246
            M   KKRNFQIEAFKH+VV+DPKY+DKTWK+LEHAI EIYNHNASGLSFEELYRNAYNMV
Sbjct: 1    MSNQKKRNFQIEAFKHRVVMDPKYADKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMV 60

Query: 247  LHKFGDKLYSGLVTTMTTHLKQVCALIESAQGGLFLEELDRKWTDHNKALQMIRDILMYM 426
            LHKFG+KLYSGLV TMT HLK +   +E+AQGG FLEEL+RKW DHNKALQMIRDILMYM
Sbjct: 61   LHKFGEKLYSGLVATMTGHLKAIAQSVEAAQGGSFLEELNRKWNDHNKALQMIRDILMYM 120

Query: 427  DRTYIPNTQKTPVHVLGLNLWRDHIIRSSQIQNRLLNTLLELVQRERTGEVINRGLMRNL 606
            DRTYIP+TQKTPVH LGLNLW++++I SSQI+ RLLNTLLELV  ERTGEVI+RG+MRN+
Sbjct: 121  DRTYIPSTQKTPVHELGLNLWKENVIYSSQIRTRLLNTLLELVHSERTGEVIDRGIMRNI 180

Query: 607  VQMLMDLGSSVYQEYFEKHFLGVSSNFYSVESQRFIECCDCGEYLKKAEIRLNEEMERVS 786
             +MLMDLG SVY + FE HFL VS+ FY  ESQ+FIECCDCG+YLKKAE RLNEEMERVS
Sbjct: 181  TKMLMDLGPSVYGQDFETHFLQVSAEFYQAESQKFIECCDCGDYLKKAERRLNEEMERVS 240

Query: 787  HYLIARTEGKITNVVEKEMIANHMQRLVHMENSGLIKMLVDDKYEDLGRMYSLFCRVADG 966
            HYL +RTE KITNVVEKEMI NHM RL+HMENSGL+ ML DDKYED+ RMY+LF RV DG
Sbjct: 241  HYLDSRTEKKITNVVEKEMIENHMLRLIHMENSGLVHMLCDDKYEDMSRMYNLFRRVTDG 300

Query: 967  LSTLKDVLTSHLRETGKELVTDPERSKDPVDFVQRLLDEKDKYDKIIGLAFNNDKTFLN 1143
            LS +++V+TSH+RE+GK+LVTDPER KDPV++VQRLLDEKDKYDKII LAF NDK+F N
Sbjct: 301  LSKIREVMTSHMRESGKQLVTDPERLKDPVEYVQRLLDEKDKYDKIINLAFINDKSFQN 359