BLASTX nr result
ID: Coptis25_contig00018938
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00018938
(230 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat... 124 8e-27
emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera] 124 8e-27
ref|XP_002310258.1| predicted protein [Populus trichocarpa] gi|2... 119 3e-25
ref|XP_003522204.1| PREDICTED: putative pentatricopeptide repeat... 117 1e-24
ref|XP_003551291.1| PREDICTED: putative pentatricopeptide repeat... 116 2e-24
>ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840 [Vitis vinifera]
Length = 713
Score = 124 bits (311), Expect = 8e-27
Identities = 57/76 (75%), Positives = 67/76 (88%)
Frame = +2
Query: 2 AILEQGKQLHAHILLIGLENDLMIHSALINMYCKCGSVQEASRIFNAVENDSVVSWTAMI 181
AILE GKQLHA++L IGLE+ M+ SALINMYCKCGS++EASRIF+A END +VSWTAMI
Sbjct: 433 AILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMI 492
Query: 182 NGYAEHGHCKEAIDLF 229
NGYAEHG+ +E IDLF
Sbjct: 493 NGYAEHGYSREVIDLF 508
Score = 68.6 bits (166), Expect = 5e-10
Identities = 31/75 (41%), Positives = 49/75 (65%)
Frame = +2
Query: 2 AILEQGKQLHAHILLIGLENDLMIHSALINMYCKCGSVQEASRIFNAVENDSVVSWTAMI 181
A +E G+QLHA IL +GL L + ++++ MY KCG + +S IF+ + +VSW+ +I
Sbjct: 332 ARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTII 391
Query: 182 NGYAEHGHCKEAIDL 226
GY++ GH EA +L
Sbjct: 392 AGYSQGGHVSEAFEL 406
Score = 60.1 bits (144), Expect = 2e-07
Identities = 29/71 (40%), Positives = 44/71 (61%)
Frame = +2
Query: 17 GKQLHAHILLIGLENDLMIHSALINMYCKCGSVQEASRIFNAVENDSVVSWTAMINGYAE 196
G+ LH + + GL N + + SAL++MY K G + E R+F+ + +VVSWTA+I G
Sbjct: 135 GELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVR 194
Query: 197 HGHCKEAIDLF 229
G+ KEA+ F
Sbjct: 195 AGYNKEALVYF 205
>emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
Length = 713
Score = 124 bits (311), Expect = 8e-27
Identities = 57/76 (75%), Positives = 67/76 (88%)
Frame = +2
Query: 2 AILEQGKQLHAHILLIGLENDLMIHSALINMYCKCGSVQEASRIFNAVENDSVVSWTAMI 181
AILE GKQLHA++L IGLE+ M+ SALINMYCKCGS++EASRIF+A END +VSWTAMI
Sbjct: 433 AILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMI 492
Query: 182 NGYAEHGHCKEAIDLF 229
NGYAEHG+ +E IDLF
Sbjct: 493 NGYAEHGYSREVIDLF 508
Score = 67.8 bits (164), Expect = 9e-10
Identities = 31/75 (41%), Positives = 48/75 (64%)
Frame = +2
Query: 2 AILEQGKQLHAHILLIGLENDLMIHSALINMYCKCGSVQEASRIFNAVENDSVVSWTAMI 181
A +E G+QLHA IL +GL L + ++++ MY KCG + +S IF+ + +VSW+ +I
Sbjct: 332 ARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTII 391
Query: 182 NGYAEHGHCKEAIDL 226
GY + GH EA +L
Sbjct: 392 AGYXQGGHVSEAFEL 406
Score = 60.1 bits (144), Expect = 2e-07
Identities = 29/71 (40%), Positives = 44/71 (61%)
Frame = +2
Query: 17 GKQLHAHILLIGLENDLMIHSALINMYCKCGSVQEASRIFNAVENDSVVSWTAMINGYAE 196
G+ LH + + GL N + + SAL++MY K G + E R+F+ + +VVSWTA+I G
Sbjct: 135 GELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVR 194
Query: 197 HGHCKEAIDLF 229
G+ KEA+ F
Sbjct: 195 AGYNKEALVYF 205
>ref|XP_002310258.1| predicted protein [Populus trichocarpa] gi|222853161|gb|EEE90708.1|
predicted protein [Populus trichocarpa]
Length = 666
Score = 119 bits (298), Expect = 3e-25
Identities = 54/76 (71%), Positives = 67/76 (88%)
Frame = +2
Query: 2 AILEQGKQLHAHILLIGLENDLMIHSALINMYCKCGSVQEASRIFNAVENDSVVSWTAMI 181
AILEQGKQLHAH+L +GLE + M+ SALINMY KCGS++EAS+IF+ E +++VSWTAMI
Sbjct: 385 AILEQGKQLHAHVLCVGLEQNTMVQSALINMYSKCGSIKEASKIFDEAEYNNIVSWTAMI 444
Query: 182 NGYAEHGHCKEAIDLF 229
NGYAEHG+ +EAIDLF
Sbjct: 445 NGYAEHGYSQEAIDLF 460
Score = 65.5 bits (158), Expect = 4e-09
Identities = 28/72 (38%), Positives = 47/72 (65%)
Frame = +2
Query: 8 LEQGKQLHAHILLIGLENDLMIHSALINMYCKCGSVQEASRIFNAVENDSVVSWTAMING 187
+E G+QLHAH++ GL + L + ++++ MY KC + AS +F + ++SW+ MI+G
Sbjct: 286 IEWGEQLHAHVIRRGLVDSLSVANSIMAMYSKCWQLDLASTVFQGLSRRDIISWSTMISG 345
Query: 188 YAEHGHCKEAID 223
YA+ G +EA D
Sbjct: 346 YAQGGCGEEAFD 357
Score = 54.7 bits (130), Expect = 8e-06
Identities = 27/71 (38%), Positives = 40/71 (56%)
Frame = +2
Query: 17 GKQLHAHILLIGLENDLMIHSALINMYCKCGSVQEASRIFNAVENDSVVSWTAMINGYAE 196
G+ LH + + N + + SAL++MY K G V E +F + +VVSWTA+I G
Sbjct: 87 GESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGCIVFKEMPLRNVVSWTAIIAGLVR 146
Query: 197 HGHCKEAIDLF 229
G+ KEA+ F
Sbjct: 147 AGYNKEALAYF 157
>ref|XP_003522204.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 752
Score = 117 bits (292), Expect = 1e-24
Identities = 50/76 (65%), Positives = 70/76 (92%)
Frame = +2
Query: 2 AILEQGKQLHAHILLIGLENDLMIHSALINMYCKCGSVQEASRIFNAVENDSVVSWTAMI 181
A+LEQGKQ+HAH+L IG++++ M+HSALI+MY KCGSV+EAS+IFN ++ ++++SWTAMI
Sbjct: 474 ALLEQGKQVHAHVLCIGIDHEAMVHSALISMYSKCGSVEEASKIFNGMKINNIISWTAMI 533
Query: 182 NGYAEHGHCKEAIDLF 229
NGYAEHG+ +EAI+LF
Sbjct: 534 NGYAEHGYSQEAINLF 549
Score = 63.9 bits (154), Expect = 1e-08
Identities = 25/74 (33%), Positives = 49/74 (66%)
Frame = +2
Query: 2 AILEQGKQLHAHILLIGLENDLMIHSALINMYCKCGSVQEASRIFNAVENDSVVSWTAMI 181
AI + G+Q+H H+L +GL + L + ++++ +Y K G ++ AS +F+ + ++SW+ +I
Sbjct: 373 AIAKWGEQIHGHVLRLGLVDALSVANSIVTLYSKSGLLKSASLVFHGITRKDIISWSTII 432
Query: 182 NGYAEHGHCKEAID 223
Y++ G+ KEA D
Sbjct: 433 AVYSQGGYAKEAFD 446
Score = 57.4 bits (137), Expect = 1e-06
Identities = 28/71 (39%), Positives = 42/71 (59%)
Frame = +2
Query: 17 GKQLHAHILLIGLENDLMIHSALINMYCKCGSVQEASRIFNAVENDSVVSWTAMINGYAE 196
G+ LH + GL N + + SALI+MY K G +++ R+F + +VVSWTA+I G
Sbjct: 176 GELLHGFSVKSGLINSVFVSSALIDMYMKVGKIEQGCRVFKKMTKRNVVSWTAIIAGLVH 235
Query: 197 HGHCKEAIDLF 229
G+ EA+ F
Sbjct: 236 AGYNMEALLYF 246
>ref|XP_003551291.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 733
Score = 116 bits (291), Expect = 2e-24
Identities = 50/76 (65%), Positives = 69/76 (90%)
Frame = +2
Query: 2 AILEQGKQLHAHILLIGLENDLMIHSALINMYCKCGSVQEASRIFNAVENDSVVSWTAMI 181
A+LEQGKQ+HAH+L IG++++ M+HSA+I+MY KCGSVQEAS+IFN ++ + ++SWTAMI
Sbjct: 441 ALLEQGKQVHAHLLCIGIDHEAMVHSAIISMYSKCGSVQEASKIFNGMKINDIISWTAMI 500
Query: 182 NGYAEHGHCKEAIDLF 229
NGYAEHG+ +EAI+LF
Sbjct: 501 NGYAEHGYSQEAINLF 516
Score = 69.3 bits (168), Expect = 3e-10
Identities = 27/74 (36%), Positives = 50/74 (67%)
Frame = +2
Query: 2 AILEQGKQLHAHILLIGLENDLMIHSALINMYCKCGSVQEASRIFNAVENDSVVSWTAMI 181
A + G+Q+H H+L +GL N L + +++I +Y KCG ++ AS +F+ + ++SW+ +I
Sbjct: 340 AAAKWGEQIHGHVLRLGLVNALSVANSIITLYSKCGLLKSASLVFHGITRKDIISWSTII 399
Query: 182 NGYAEHGHCKEAID 223
+ Y++ G+ KEA D
Sbjct: 400 SVYSQGGYAKEAFD 413