BLASTX nr result

ID: Coptis25_contig00018931 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018931
         (253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317723.1| predicted protein [Populus trichocarpa] gi|2...   108   4e-22
ref|XP_002268131.1| PREDICTED: uncharacterized protein LOC100261...    99   4e-19
emb|CAN66246.1| hypothetical protein VITISV_033016 [Vitis vinifera]    99   4e-19
ref|XP_002530545.1| protein binding protein, putative [Ricinus c...    92   3e-17
ref|XP_002330854.1| predicted protein [Populus trichocarpa] gi|2...    88   6e-16

>ref|XP_002317723.1| predicted protein [Populus trichocarpa] gi|222858396|gb|EEE95943.1|
           predicted protein [Populus trichocarpa]
          Length = 326

 Score =  108 bits (271), Expect = 4e-22
 Identities = 50/84 (59%), Positives = 57/84 (67%)
 Frame = +1

Query: 1   PADPNHALTLISTPADQQEGILTILCDACGEQPNGFRYNCSTCNLDFHILCAAMPPSLRH 180
           P  P H LTL STP        +  CD CG Q NGF Y+C+TC+ D H++CA  P SL H
Sbjct: 67  PCHPIHPLTLFSTPVYPGG---SFNCDGCGLQGNGFNYHCTTCDFDVHMMCATNPLSLAH 123

Query: 181 QAHPHSLNLAFNPPYQTKGFSCDI 252
           Q+HPH LNLAF PPYQTKGFSCDI
Sbjct: 124 QSHPHQLNLAFYPPYQTKGFSCDI 147



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 26/59 (44%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
 Frame = +1

Query: 76  CDACGEQPNGFRYNCSTCNLDFHILCAAMPPSLRHQAHP-HSLNLAFNPPYQTKGFSCD 249
           C AC  QP+G+ Y+C  CN   HI C  MP  + H  HP H L L   P Y    F+CD
Sbjct: 32  CSACNLQPSGWMYSCKPCNFTLHISCTQMPTLITHPCHPIHPLTLFSTPVYPGGSFNCD 90


>ref|XP_002268131.1| PREDICTED: uncharacterized protein LOC100261320 [Vitis vinifera]
          Length = 360

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 45/79 (56%), Positives = 55/79 (69%)
 Frame = +1

Query: 16  HALTLISTPADQQEGILTILCDACGEQPNGFRYNCSTCNLDFHILCAAMPPSLRHQAHPH 195
           HAL+L+  PA   EG+    CDACG+Q NGF Y+C  CN+D HILCA+ P  L HQ+H H
Sbjct: 77  HALSLLPNPA-YPEGLFN--CDACGKQGNGFSYHCGVCNIDLHILCASKPLFLNHQSHHH 133

Query: 196 SLNLAFNPPYQTKGFSCDI 252
            L L+F+PPY  K FSCDI
Sbjct: 134 RLALSFSPPYHNKSFSCDI 152


>emb|CAN66246.1| hypothetical protein VITISV_033016 [Vitis vinifera]
          Length = 366

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 45/79 (56%), Positives = 55/79 (69%)
 Frame = +1

Query: 16  HALTLISTPADQQEGILTILCDACGEQPNGFRYNCSTCNLDFHILCAAMPPSLRHQAHPH 195
           HAL+L+  PA   EG+    CDACG+Q NGF Y+C  CN+D HILCA+ P  L HQ+H H
Sbjct: 83  HALSLLPNPA-YPEGLFN--CDACGKQGNGFSYHCGVCNIDLHILCASKPLFLNHQSHHH 139

Query: 196 SLNLAFNPPYQTKGFSCDI 252
            L L+F+PPY  K FSCDI
Sbjct: 140 RLALSFSPPYHNKSFSCDI 158


>ref|XP_002530545.1| protein binding protein, putative [Ricinus communis]
           gi|223529907|gb|EEF31836.1| protein binding protein,
           putative [Ricinus communis]
          Length = 324

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 43/84 (51%), Positives = 53/84 (63%)
 Frame = +1

Query: 1   PADPNHALTLISTPADQQEGILTILCDACGEQPNGFRYNCSTCNLDFHILCAAMPPSLRH 180
           P+ PNH L L+ +P     G+ +  CDACG    GF Y+C+ C+ D H  CA  P SL +
Sbjct: 68  PSHPNHTLDLLPSPI-YPNGVFS--CDACGHGGLGFGYHCNHCSFDIHTTCAQNPLSLTN 124

Query: 181 QAHPHSLNLAFNPPYQTKGFSCDI 252
           Q HPH L L F+PPY TKGFSCDI
Sbjct: 125 QFHPHLLQLTFDPPYHTKGFSCDI 148



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
 Frame = +1

Query: 76  CDACGEQPNGFRYNCSTCNLDFHILCAAMPPSLRHQAHP-HSLNLAFNPPYQTKGFSCD 249
           C AC  + +G+ Y+C+ CN   H+ C+ +P  + H +HP H+L+L  +P Y    FSCD
Sbjct: 33  CSACQLESSGWMYSCNPCNFTLHLSCSQLPSLITHPSHPNHTLDLLPSPIYPNGVFSCD 91


>ref|XP_002330854.1| predicted protein [Populus trichocarpa] gi|222872676|gb|EEF09807.1|
           predicted protein [Populus trichocarpa]
          Length = 321

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 42/84 (50%), Positives = 50/84 (59%)
 Frame = +1

Query: 1   PADPNHALTLISTPADQQEGILTILCDACGEQPNGFRYNCSTCNLDFHILCAAMPPSLRH 180
           P   NH L+L+STP    +      CDACG+Q NGF Y+C TCN+  H  CAAMP  L H
Sbjct: 72  PYHQNHVLSLLSTPMYPGD---LFNCDACGKQGNGFSYHCGTCNIYIHTTCAAMPLVLTH 128

Query: 181 QAHPHSLNLAFNPPYQTKGFSCDI 252
           Q+H H LNL    PY    FSCD+
Sbjct: 129 QSHHHQLNLTPFAPYPNMSFSCDM 152


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