BLASTX nr result

ID: Coptis25_contig00018930 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018930
         (1400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003604531.1| hypothetical protein MTR_4g014190 [Medicago ...    60   2e-11
ref|XP_004151750.1| PREDICTED: uncharacterized protein LOC101220...    60   1e-10
gb|ABN08700.1| Endonuclease/exonuclease/phosphatase [Medicago tr...    61   1e-10
emb|CCA65978.1| hypothetical protein [Beta vulgaris subsp. vulga...    63   3e-10
ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    64   3e-10

>ref|XP_003604531.1| hypothetical protein MTR_4g014190 [Medicago truncatula]
            gi|355505586|gb|AES86728.1| hypothetical protein
            MTR_4g014190 [Medicago truncatula]
          Length = 382

 Score = 59.7 bits (143), Expect(2) = 2e-11
 Identities = 23/56 (41%), Positives = 37/56 (66%)
 Frame = -1

Query: 1004 LRTIPIWVVMKGLPMEMWNKEGFSQVGNAVGVPIFTDRLTENMSRIAYARVCVEID 837
            L+ +P+W+ +  LP+  W  +  S++G+ +G P+F D  T   SRI+YAR+ VEID
Sbjct: 213  LKVVPLWIQLPNLPLTCWGLDFLSRIGSTLGNPLFADECTSKQSRISYARLLVEID 268



 Score = 36.6 bits (83), Expect(2) = 2e-11
 Identities = 24/105 (22%), Positives = 41/105 (39%)
 Frame = -2

Query: 763 ITNWKPPRCLECEVFGHIDQSCHKKKQFGRVESNKVWLQKTQVEKEEEGKAKSQERMKLK 584
           + +W+P  C +C+  GH+   C K+         K W+ KTQV   ++GK          
Sbjct: 292 VYDWEPSFCKKCQQVGHV---CDKQSFQPVERPKKDWIPKTQVNLVDKGK---------- 338

Query: 583 EVMVDTQELVEVNNIKESDGWETPNKKHSCRARVIKRKGALVPMS 449
                     +   I     W  P +K + +  V+ +   +VP S
Sbjct: 339 ----------QPEKINSDIEWNVP-RKTATKQHVVSQNSTMVPTS 372


>ref|XP_004151750.1| PREDICTED: uncharacterized protein LOC101220238, partial [Cucumis
           sativus]
          Length = 169

 Score = 60.1 bits (144), Expect(2) = 1e-10
 Identities = 24/67 (35%), Positives = 41/67 (61%)
 Frame = -1

Query: 998 TIPIWVVMKGLPMEMWNKEGFSQVGNAVGVPIFTDRLTENMSRIAYARVCVEIDAKCTYP 819
           ++P+W+ +  +P+E+W   G   V +A+G P+  D  T+   R++YAR+CVE++   T P
Sbjct: 50  SVPVWIKLGRIPLELWTDAGLVVVASAIGKPLSVDLATKERCRLSYARICVELNVDSTMP 109

Query: 818 EAIPVIL 798
             I V L
Sbjct: 110 IEITVNL 116



 Score = 33.9 bits (76), Expect(2) = 1e-10
 Identities = 19/47 (40%), Positives = 24/47 (51%)
 Frame = -2

Query: 754 WKPPRCLECEVFGHIDQSCHKKKQFGRVESNKVWLQKTQVEKEEEGK 614
           WKP +C  C  FGH   +C KK +   +E NK    K  V KE+  K
Sbjct: 129 WKPRKCNLCHSFGHSQSTCPKKIE---IEDNK----KEAVGKEDPVK 168


>gb|ABN08700.1| Endonuclease/exonuclease/phosphatase [Medicago truncatula]
          Length = 814

 Score = 60.8 bits (146), Expect(2) = 1e-10
 Identities = 23/56 (41%), Positives = 37/56 (66%)
 Frame = -1

Query: 1004 LRTIPIWVVMKGLPMEMWNKEGFSQVGNAVGVPIFTDRLTENMSRIAYARVCVEID 837
            L+ +P+W+ +  LP+  W  +  S++G+ +G P+F D  T   SRI+YAR+ VEID
Sbjct: 352  LKVVPLWIQLPNLPLTCWGLDSLSRIGSTLGNPLFADECTSKQSRISYARLLVEID 407



 Score = 32.7 bits (73), Expect(2) = 1e-10
 Identities = 15/50 (30%), Positives = 25/50 (50%)
 Frame = -2

Query: 763 ITNWKPPRCLECEVFGHIDQSCHKKKQFGRVESNKVWLQKTQVEKEEEGK 614
           + +W+P  C +C+   H+   C K+         K W+ KTQV   ++GK
Sbjct: 431 VYDWEPSFCKKCQQVDHV---CDKQSVQPVERPKKDWIPKTQVNLVDKGK 477


>emb|CCA65978.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 428

 Score = 62.8 bits (151), Expect(2) = 3e-10
 Identities = 26/67 (38%), Positives = 40/67 (59%)
 Frame = -1

Query: 1004 LRTIPIWVVMKGLPMEMWNKEGFSQVGNAVGVPIFTDRLTENMSRIAYARVCVEIDAKCT 825
            L+ IPIWV    LP+  W+ +  S++G+ +GVPI+ D  T    RI++AR+ +E+D    
Sbjct: 205  LKIIPIWVTFPNLPLNCWSPDSLSRIGSTIGVPIYADECTTKQLRISFARILIEMDVTGK 264

Query: 824  YPEAIPV 804
              E I V
Sbjct: 265  IQEEIKV 271



 Score = 29.6 bits (65), Expect(2) = 3e-10
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = -2

Query: 754 WKPPRCLECEVFGHIDQSCHKKKQFGRVESNKVWLQKTQVE 632
           W PP C +C+  GH+   C +KK+  +    + W+   Q +
Sbjct: 287 WLPPFCPKCQKIGHV---CEEKKKATKGRITQKWVPVGQAK 324


>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
            predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 64.3 bits (155), Expect(2) = 3e-10
 Identities = 29/61 (47%), Positives = 40/61 (65%)
 Frame = -1

Query: 1007 ELRTIPIWVVMKGLPMEMWNKEGFSQVGNAVGVPIFTDRLTENMSRIAYARVCVEIDAKC 828
            +L  +P+WV +  +P+E W  +G S V +AVGVP+  D  T    R++YARVCVEIDA  
Sbjct: 236  DLARVPVWVRLYNVPLEYWTIKGLSCVASAVGVPLHADHTTLLRKRLSYARVCVEIDASK 295

Query: 827  T 825
            T
Sbjct: 296  T 296



 Score = 27.7 bits (60), Expect(2) = 3e-10
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -2

Query: 754 WKPPRCLECEVFGHIDQSC 698
           W P +C  C VFGH    C
Sbjct: 319 WIPSKCSNCNVFGHTTALC 337


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