BLASTX nr result
ID: Coptis25_contig00018930
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00018930 (1400 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003604531.1| hypothetical protein MTR_4g014190 [Medicago ... 60 2e-11 ref|XP_004151750.1| PREDICTED: uncharacterized protein LOC101220... 60 1e-10 gb|ABN08700.1| Endonuclease/exonuclease/phosphatase [Medicago tr... 61 1e-10 emb|CCA65978.1| hypothetical protein [Beta vulgaris subsp. vulga... 63 3e-10 ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2... 64 3e-10 >ref|XP_003604531.1| hypothetical protein MTR_4g014190 [Medicago truncatula] gi|355505586|gb|AES86728.1| hypothetical protein MTR_4g014190 [Medicago truncatula] Length = 382 Score = 59.7 bits (143), Expect(2) = 2e-11 Identities = 23/56 (41%), Positives = 37/56 (66%) Frame = -1 Query: 1004 LRTIPIWVVMKGLPMEMWNKEGFSQVGNAVGVPIFTDRLTENMSRIAYARVCVEID 837 L+ +P+W+ + LP+ W + S++G+ +G P+F D T SRI+YAR+ VEID Sbjct: 213 LKVVPLWIQLPNLPLTCWGLDFLSRIGSTLGNPLFADECTSKQSRISYARLLVEID 268 Score = 36.6 bits (83), Expect(2) = 2e-11 Identities = 24/105 (22%), Positives = 41/105 (39%) Frame = -2 Query: 763 ITNWKPPRCLECEVFGHIDQSCHKKKQFGRVESNKVWLQKTQVEKEEEGKAKSQERMKLK 584 + +W+P C +C+ GH+ C K+ K W+ KTQV ++GK Sbjct: 292 VYDWEPSFCKKCQQVGHV---CDKQSFQPVERPKKDWIPKTQVNLVDKGK---------- 338 Query: 583 EVMVDTQELVEVNNIKESDGWETPNKKHSCRARVIKRKGALVPMS 449 + I W P +K + + V+ + +VP S Sbjct: 339 ----------QPEKINSDIEWNVP-RKTATKQHVVSQNSTMVPTS 372 >ref|XP_004151750.1| PREDICTED: uncharacterized protein LOC101220238, partial [Cucumis sativus] Length = 169 Score = 60.1 bits (144), Expect(2) = 1e-10 Identities = 24/67 (35%), Positives = 41/67 (61%) Frame = -1 Query: 998 TIPIWVVMKGLPMEMWNKEGFSQVGNAVGVPIFTDRLTENMSRIAYARVCVEIDAKCTYP 819 ++P+W+ + +P+E+W G V +A+G P+ D T+ R++YAR+CVE++ T P Sbjct: 50 SVPVWIKLGRIPLELWTDAGLVVVASAIGKPLSVDLATKERCRLSYARICVELNVDSTMP 109 Query: 818 EAIPVIL 798 I V L Sbjct: 110 IEITVNL 116 Score = 33.9 bits (76), Expect(2) = 1e-10 Identities = 19/47 (40%), Positives = 24/47 (51%) Frame = -2 Query: 754 WKPPRCLECEVFGHIDQSCHKKKQFGRVESNKVWLQKTQVEKEEEGK 614 WKP +C C FGH +C KK + +E NK K V KE+ K Sbjct: 129 WKPRKCNLCHSFGHSQSTCPKKIE---IEDNK----KEAVGKEDPVK 168 >gb|ABN08700.1| Endonuclease/exonuclease/phosphatase [Medicago truncatula] Length = 814 Score = 60.8 bits (146), Expect(2) = 1e-10 Identities = 23/56 (41%), Positives = 37/56 (66%) Frame = -1 Query: 1004 LRTIPIWVVMKGLPMEMWNKEGFSQVGNAVGVPIFTDRLTENMSRIAYARVCVEID 837 L+ +P+W+ + LP+ W + S++G+ +G P+F D T SRI+YAR+ VEID Sbjct: 352 LKVVPLWIQLPNLPLTCWGLDSLSRIGSTLGNPLFADECTSKQSRISYARLLVEID 407 Score = 32.7 bits (73), Expect(2) = 1e-10 Identities = 15/50 (30%), Positives = 25/50 (50%) Frame = -2 Query: 763 ITNWKPPRCLECEVFGHIDQSCHKKKQFGRVESNKVWLQKTQVEKEEEGK 614 + +W+P C +C+ H+ C K+ K W+ KTQV ++GK Sbjct: 431 VYDWEPSFCKKCQQVDHV---CDKQSVQPVERPKKDWIPKTQVNLVDKGK 477 >emb|CCA65978.1| hypothetical protein [Beta vulgaris subsp. vulgaris] Length = 428 Score = 62.8 bits (151), Expect(2) = 3e-10 Identities = 26/67 (38%), Positives = 40/67 (59%) Frame = -1 Query: 1004 LRTIPIWVVMKGLPMEMWNKEGFSQVGNAVGVPIFTDRLTENMSRIAYARVCVEIDAKCT 825 L+ IPIWV LP+ W+ + S++G+ +GVPI+ D T RI++AR+ +E+D Sbjct: 205 LKIIPIWVTFPNLPLNCWSPDSLSRIGSTIGVPIYADECTTKQLRISFARILIEMDVTGK 264 Query: 824 YPEAIPV 804 E I V Sbjct: 265 IQEEIKV 271 Score = 29.6 bits (65), Expect(2) = 3e-10 Identities = 12/41 (29%), Positives = 21/41 (51%) Frame = -2 Query: 754 WKPPRCLECEVFGHIDQSCHKKKQFGRVESNKVWLQKTQVE 632 W PP C +C+ GH+ C +KK+ + + W+ Q + Sbjct: 287 WLPPFCPKCQKIGHV---CEEKKKATKGRITQKWVPVGQAK 324 >ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1| predicted protein [Populus trichocarpa] Length = 1386 Score = 64.3 bits (155), Expect(2) = 3e-10 Identities = 29/61 (47%), Positives = 40/61 (65%) Frame = -1 Query: 1007 ELRTIPIWVVMKGLPMEMWNKEGFSQVGNAVGVPIFTDRLTENMSRIAYARVCVEIDAKC 828 +L +P+WV + +P+E W +G S V +AVGVP+ D T R++YARVCVEIDA Sbjct: 236 DLARVPVWVRLYNVPLEYWTIKGLSCVASAVGVPLHADHTTLLRKRLSYARVCVEIDASK 295 Query: 827 T 825 T Sbjct: 296 T 296 Score = 27.7 bits (60), Expect(2) = 3e-10 Identities = 9/19 (47%), Positives = 10/19 (52%) Frame = -2 Query: 754 WKPPRCLECEVFGHIDQSC 698 W P +C C VFGH C Sbjct: 319 WIPSKCSNCNVFGHTTALC 337