BLASTX nr result

ID: Coptis25_contig00018929 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018929
         (1015 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323765.1| predicted protein [Populus trichocarpa] gi|2...   531   e-149
ref|XP_002272202.2| PREDICTED: F-box/LRR-repeat protein 14 [Viti...   520   e-145
ref|XP_004135871.1| PREDICTED: F-box/LRR-repeat protein 14-like ...   518   e-145
ref|XP_003546921.1| PREDICTED: F-box/LRR-repeat protein 14-like ...   500   e-139
ref|XP_003543698.1| PREDICTED: F-box/LRR-repeat protein 14-like ...   464   e-128

>ref|XP_002323765.1| predicted protein [Populus trichocarpa] gi|222866767|gb|EEF03898.1|
            predicted protein [Populus trichocarpa]
          Length = 467

 Score =  531 bits (1369), Expect = e-149
 Identities = 256/338 (75%), Positives = 299/338 (88%), Gaps = 1/338 (0%)
 Frame = -3

Query: 1013 NEAVTSLCNRFSNLKKVDIVYSGWMSILGKQLDDHGLHILSERCSSLVDLTLSYCTFITD 834
            N+A+TSLCNRF NL KV+I Y+GWMS LGKQLDD GL IL+  C SL DLTLSYCTFITD
Sbjct: 53   NQALTSLCNRFPNLAKVEITYAGWMSKLGKQLDDQGLVILANNCPSLTDLTLSYCTFITD 112

Query: 833  MGLGHLASCTKLTTLKLNFTPGVTGCGILSLAVGCKNLTTLHLIRCLNVSGVEWLEYLGK 654
            +GL HLASC+KL+ LKLNFTP +TGCGILSL VGCKNLT LHLIRCLNV+ VEWLEY+GK
Sbjct: 113  VGLRHLASCSKLSALKLNFTPRITGCGILSLVVGCKNLTILHLIRCLNVTSVEWLEYIGK 172

Query: 653  LETLQDLSIKNCRAIGEGDLIKLGPGWRKLKRLEFEVDANYRFMKVHDRLAMDRW-KNCV 477
            LETL+DLSIKNCRA+GEGDLIKLG  WRKLKRL+FEVDANYR+MKV+DRLA+DRW K  +
Sbjct: 173  LETLEDLSIKNCRALGEGDLIKLGSSWRKLKRLQFEVDANYRYMKVYDRLAVDRWQKQWI 232

Query: 476  PCDSMEELSLVNCLISPERGLSCVFGRCKSLMKLHLDMCIGVRDCDIVSLARRSSNLKSI 297
            PC+SM ELSLVNC+ISP RGL+C+ G+CK+L K+HLDMC+GVRDCDI+ LA++SSNL+SI
Sbjct: 233  PCESMLELSLVNCIISPGRGLACMLGKCKNLEKIHLDMCVGVRDCDIIGLAKKSSNLRSI 292

Query: 296  SVRVPSDYSLPLPRLINDSLRLTDQSLRAVAHNCSMLESVEISFSDGEFPCLTSFTLNGI 117
            S+RVPSD+SLPL  L+N+ LRLTD+SL+A+A NCSMLESV ISFSDGEFP  +SFT NGI
Sbjct: 293  SLRVPSDFSLPL--LMNNPLRLTDESLKALAQNCSMLESVRISFSDGEFPSFSSFTQNGI 350

Query: 116  LALIELCPVRILVLDRVYSFNDLGMEALCSAVFLETLE 3
            L LI++CP+R L LD VYSFND+GMEALCSA +LETLE
Sbjct: 351  LNLIQMCPIRELALDHVYSFNDVGMEALCSAHYLETLE 388


>ref|XP_002272202.2| PREDICTED: F-box/LRR-repeat protein 14 [Vitis vinifera]
          Length = 475

 Score =  520 bits (1340), Expect = e-145
 Identities = 253/338 (74%), Positives = 295/338 (87%), Gaps = 1/338 (0%)
 Frame = -3

Query: 1013 NEAVTSLCNRFSNLKKVDIVYSGWMSILGKQLDDHGLHILSERCSSLVDLTLSYCTFITD 834
            NEA+TSLCNRF NL KV+I YSGWMS  GKQLDD GL ILS  C SL D+TLSYCTFITD
Sbjct: 61   NEALTSLCNRFPNLVKVEITYSGWMSKSGKQLDDQGLLILSVLCPSLTDVTLSYCTFITD 120

Query: 833  MGLGHLASCTKLTTLKLNFTPGVTGCGILSLAVGCKNLTTLHLIRCLNVSGVEWLEYLGK 654
            +GL HLASC+KL+ LKLNFTP +TGCGILSL VGCK LT LHLIRCLNVS VEWLEYLGK
Sbjct: 121  VGLSHLASCSKLSALKLNFTPRITGCGILSLVVGCKKLTVLHLIRCLNVSSVEWLEYLGK 180

Query: 653  LETLQDLSIKNCRAIGEGDLIKLGPGWRKLKRLEFEVDANYRFMKVHDRLAMDRW-KNCV 477
            LETL+DLSIKNCRAIGEGDLIKLGP WRK+KRL+FEVD NYR+MKV+DRLA+DRW K  V
Sbjct: 181  LETLEDLSIKNCRAIGEGDLIKLGPTWRKIKRLQFEVDVNYRYMKVYDRLAVDRWQKQLV 240

Query: 476  PCDSMEELSLVNCLISPERGLSCVFGRCKSLMKLHLDMCIGVRDCDIVSLARRSSNLKSI 297
            PC++M ELSLVNC+ISP RGL+C+  +CK+L K+ LDMC+GVRDCDIV LA++SSNL+SI
Sbjct: 241  PCENMLELSLVNCIISPGRGLACLLEKCKNLEKIRLDMCVGVRDCDIVGLAQKSSNLRSI 300

Query: 296  SVRVPSDYSLPLPRLINDSLRLTDQSLRAVAHNCSMLESVEISFSDGEFPCLTSFTLNGI 117
            S+R PSD+SLPL  L+++ LRLTD+SL+A+A NCSMLES+ ISF+DGEFP  +SFTLNGI
Sbjct: 301  SLRGPSDFSLPL--LLSNPLRLTDESLKALAQNCSMLESIRISFTDGEFPSFSSFTLNGI 358

Query: 116  LALIELCPVRILVLDRVYSFNDLGMEALCSAVFLETLE 3
            L +I++CP+R L LD VYSFND+GMEALCSA +LETLE
Sbjct: 359  LTVIQMCPIRKLSLDHVYSFNDVGMEALCSAPYLETLE 396


>ref|XP_004135871.1| PREDICTED: F-box/LRR-repeat protein 14-like [Cucumis sativus]
            gi|449491060|ref|XP_004158787.1| PREDICTED:
            F-box/LRR-repeat protein 14-like [Cucumis sativus]
          Length = 481

 Score =  518 bits (1335), Expect = e-145
 Identities = 252/338 (74%), Positives = 293/338 (86%), Gaps = 1/338 (0%)
 Frame = -3

Query: 1013 NEAVTSLCNRFSNLKKVDIVYSGWMSILGKQLDDHGLHILSERCSSLVDLTLSYCTFITD 834
            +EA+TSLC RF NL +++I YSGWMS LGKQLDD GL ILS  C SL DLTLSYCTFITD
Sbjct: 67   DEALTSLCLRFPNLVRIEITYSGWMSKLGKQLDDRGLFILSNHCPSLTDLTLSYCTFITD 126

Query: 833  MGLGHLASCTKLTTLKLNFTPGVTGCGILSLAVGCKNLTTLHLIRCLNVSGVEWLEYLGK 654
            +GL +L SC KL+ LKLNFTP +TGCGI S+AVGCKNLT LHLIRCLNVS VEWLEYLGK
Sbjct: 127  VGLRNLISCYKLSALKLNFTPRITGCGIFSIAVGCKNLTVLHLIRCLNVSSVEWLEYLGK 186

Query: 653  LETLQDLSIKNCRAIGEGDLIKLGPGWRKLKRLEFEVDANYRFMKVHDRLAMDRW-KNCV 477
            LETL+DLSI+NCRAIGEGDLIKLG  WRKLKRL+FEVDANYR+MKV+DRLA+DRW K  +
Sbjct: 187  LETLEDLSIRNCRAIGEGDLIKLGHSWRKLKRLQFEVDANYRYMKVYDRLAVDRWQKQWI 246

Query: 476  PCDSMEELSLVNCLISPERGLSCVFGRCKSLMKLHLDMCIGVRDCDIVSLARRSSNLKSI 297
             CD M ELSLVNC+ISP RGL+CV G+CK+L K+HLDMC+GVRDCDI+SLAR S NL+SI
Sbjct: 247  SCDDMLELSLVNCIISPGRGLACVLGKCKNLQKVHLDMCVGVRDCDIISLARESRNLRSI 306

Query: 296  SVRVPSDYSLPLPRLINDSLRLTDQSLRAVAHNCSMLESVEISFSDGEFPCLTSFTLNGI 117
            S+RVPSD+SLPL  L N++LRLTD+SL+A+A NCS LESV ISF+DGEFP L+SF+LNGI
Sbjct: 307  SLRVPSDFSLPL--LANNTLRLTDESLKALAENCSHLESVRISFADGEFPSLSSFSLNGI 364

Query: 116  LALIELCPVRILVLDRVYSFNDLGMEALCSAVFLETLE 3
            L L+ +CPVR L LD VYSFND+G+EALCSA +LE+LE
Sbjct: 365  LVLVRMCPVRELALDHVYSFNDMGLEALCSASYLESLE 402


>ref|XP_003546921.1| PREDICTED: F-box/LRR-repeat protein 14-like [Glycine max]
          Length = 492

 Score =  500 bits (1288), Expect = e-139
 Identities = 245/338 (72%), Positives = 291/338 (86%), Gaps = 1/338 (0%)
 Frame = -3

Query: 1013 NEAVTSLCNRFSNLKKVDIVYSGWMSILGKQLDDHGLHILSERCSSLVDLTLSYCTFITD 834
            +EA+T LC RF NL KV+I YSGWMS LGKQLDD GL IL+  C  L DL+LSYCTFITD
Sbjct: 78   DEALTCLCTRFQNLSKVEITYSGWMSKLGKQLDDKGLLILANHCPLLCDLSLSYCTFITD 137

Query: 833  MGLGHLASCTKLTTLKLNFTPGVTGCGILSLAVGCKNLTTLHLIRCLNVSGVEWLEYLGK 654
            +GL +LAS +KL++L+LNFTP +TGCGILSL VGCKNL++LHLIRCLNVS VEWLEYLGK
Sbjct: 138  VGLRYLASSSKLSSLRLNFTPRITGCGILSLVVGCKNLSSLHLIRCLNVSSVEWLEYLGK 197

Query: 653  LETLQDLSIKNCRAIGEGDLIKLGPGWRKLKRLEFEVDANYRFMKVHDRLAMDRW-KNCV 477
            L  L+DLSIKNCRAIGEGDLIKLGPGW+KL RL+FEVDANYR+MKV+DRL++DRW K  V
Sbjct: 198  LGRLEDLSIKNCRAIGEGDLIKLGPGWQKLTRLQFEVDANYRYMKVYDRLSVDRWQKQHV 257

Query: 476  PCDSMEELSLVNCLISPERGLSCVFGRCKSLMKLHLDMCIGVRDCDIVSLARRSSNLKSI 297
            PC++M ELSLVNC+ISP RGL+CV  +CK+L K+HLDMC+GVRD DI+ L++RSSNLKS+
Sbjct: 258  PCENMLELSLVNCIISPGRGLACVLRKCKNLQKIHLDMCVGVRDFDIICLSQRSSNLKSV 317

Query: 296  SVRVPSDYSLPLPRLINDSLRLTDQSLRAVAHNCSMLESVEISFSDGEFPCLTSFTLNGI 117
            S+RVPSD+S  LP L+N+ LRLTD+SL+A+A NCS LESV ISFSDGEFP  +SFTL+GI
Sbjct: 318  SLRVPSDFS--LPSLVNNPLRLTDESLKALAQNCSKLESVRISFSDGEFPSSSSFTLSGI 375

Query: 116  LALIELCPVRILVLDRVYSFNDLGMEALCSAVFLETLE 3
            L LI+ CPVR L LD VYSFND+GMEALCS  +LE+LE
Sbjct: 376  LCLIQRCPVRQLALDHVYSFNDVGMEALCSLEYLESLE 413


>ref|XP_003543698.1| PREDICTED: F-box/LRR-repeat protein 14-like [Glycine max]
          Length = 449

 Score =  464 bits (1194), Expect = e-128
 Identities = 233/338 (68%), Positives = 276/338 (81%), Gaps = 1/338 (0%)
 Frame = -3

Query: 1013 NEAVTSLCNRFSNLKKVDIVYSGWMSILGKQLDDHGLHILSERCSSLVDLTLSYCTFITD 834
            +EA++ LC RF NL KV+I YSGWMS LGKQLDD GL IL+  C  L DL+LSYCTFITD
Sbjct: 53   DEALSCLCIRFENLSKVEITYSGWMSKLGKQLDDKGLLILANHCPLLCDLSLSYCTFITD 112

Query: 833  MGLGHLASCTKLTTLKLNFTPGVTGCGILSLAVGCKNLTTLHLIRCLNVSGVEWLEYLGK 654
            +GL +LAS +KL++L+LNFTP +TGCGILSL VGCKNL++LHLIRCLNVS VEWLEYLGK
Sbjct: 113  VGLRYLASSSKLSSLRLNFTPRITGCGILSLVVGCKNLSSLHLIRCLNVSSVEWLEYLGK 172

Query: 653  LETLQDLSIKNCRAIGEGDLIKLGPGWRKLKRLEFEVDANYRFMKVHDRLAMDRW-KNCV 477
            L TL+DLSIKNCRAIGEGDLIKLGPGW+KL RL+FEVDANYR+MKV+DRL++DRW K  V
Sbjct: 173  LGTLEDLSIKNCRAIGEGDLIKLGPGWQKLTRLQFEVDANYRYMKVYDRLSVDRWQKQYV 232

Query: 476  PCDSMEELSLVNCLISPERGLSCVFGRCKSLMKLHLDMCIGVRDCDIVSLARRSSNLKSI 297
            PC +M ELSLVNC+ISP RGL+CV  +CK+L K+HLDMC+GVRD DI+ L++RSS LKS+
Sbjct: 233  PCGNMLELSLVNCIISPGRGLACVLSKCKNLQKIHLDMCVGVRDFDIICLSQRSSELKSV 292

Query: 296  SVRVPSDYSLPLPRLINDSLRLTDQSLRAVAHNCSMLESVEISFSDGEFPCLTSFTLNGI 117
            S+RVPSD+S  LP L+N+ LRLTD+SL+A+A NCS LESV ISFSDGE            
Sbjct: 293  SLRVPSDFS--LPSLVNNPLRLTDESLKALAQNCSKLESVRISFSDGE------------ 338

Query: 116  LALIELCPVRILVLDRVYSFNDLGMEALCSAVFLETLE 3
                  C VR L LD VYSFND+GMEALCSA +LE+LE
Sbjct: 339  ------CLVRQLALDHVYSFNDVGMEALCSAEYLESLE 370


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