BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018912
         (651 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004160247.1| PREDICTED: LOW QUALITY PROTEIN: eukaryotic t...   241   7e-62
ref|XP_004150392.1| PREDICTED: eukaryotic translation initiation...   241   9e-62
ref|XP_003529057.1| PREDICTED: eukaryotic translation initiation...   241   1e-61
ref|XP_003522102.1| PREDICTED: eukaryotic translation initiation...   239   4e-61
ref|XP_002285591.1| PREDICTED: eukaryotic translation initiation...   236   2e-60

>ref|XP_004160247.1| PREDICTED: LOW QUALITY PROTEIN: eukaryotic translation initiation
           factor 3 subunit B-like [Cucumis sativus]
          Length = 718

 Score =  241 bits (616), Expect = 7e-62
 Identities = 118/177 (66%), Positives = 143/177 (80%), Gaps = 1/177 (0%)
 Frame = +1

Query: 124 DVIPMSEIETKANQLGIDLSQIDFNSITLPPDEDMGILSDDEEELRKEESVGFETGFGNG 303
           DV+ M EIE  A +LGIDLSQ+DF++I LPP ED GI+SDDEE L+ EES+ F++GFGN 
Sbjct: 3   DVVLMKEIEETAGRLGIDLSQVDFDAIRLPPGEDFGIISDDEEVLQ-EESLEFDSGFGNI 61

Query: 304 IVVDHLPIVGSDKFGRLEEVIRRIFSKHGDIKEDGVWMPVDPYTEKTRGYCFIEYNTTQE 483
           IVVD+LP+V  +KF +LE V+R+IF + G IK+DG+WMPVD  T+KT GYCFIEY T QE
Sbjct: 62  IVVDNLPVVPPEKFDKLEGVVRKIFGQIGVIKDDGLWMPVDRTTQKTLGYCFIEYGTPQE 121

Query: 484 AELAKEKSHGYKLGKEYI-AVNLLDDFDRFMKVPDEWDPPETKTYTPGENLQQWLTD 651
           AELAKEK+ GYKL + +I  VN+ +DFDRFMKVPDEW PPE   YTPGENLQQWLTD
Sbjct: 122 AELAKEKTDGYKLDRAHIFTVNMFEDFDRFMKVPDEWAPPEVNPYTPGENLQQWLTD 178


>ref|XP_004150392.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           B-like [Cucumis sativus]
          Length = 718

 Score =  241 bits (615), Expect = 9e-62
 Identities = 118/177 (66%), Positives = 143/177 (80%), Gaps = 1/177 (0%)
 Frame = +1

Query: 124 DVIPMSEIETKANQLGIDLSQIDFNSITLPPDEDMGILSDDEEELRKEESVGFETGFGNG 303
           DV+ M EIE  A +LGIDLSQ+DF++I LPP ED GI+SDDEE L+ EES+ F++GFGN 
Sbjct: 3   DVVLMKEIEETAGRLGIDLSQVDFDAIRLPPGEDFGIISDDEEVLQ-EESLEFDSGFGNI 61

Query: 304 IVVDHLPIVGSDKFGRLEEVIRRIFSKHGDIKEDGVWMPVDPYTEKTRGYCFIEYNTTQE 483
           IVVD+LP+V  +KF +LE V+R+IF + G IK+DG+WMPVD  T+KT GYCFIEY T QE
Sbjct: 62  IVVDNLPVVPPEKFEKLEGVVRKIFGQIGVIKDDGLWMPVDRTTQKTLGYCFIEYGTPQE 121

Query: 484 AELAKEKSHGYKLGKEYI-AVNLLDDFDRFMKVPDEWDPPETKTYTPGENLQQWLTD 651
           AELAKEK+ GYKL + +I  VN+ +DFDRFMKVPDEW PPE   YTPGENLQQWLTD
Sbjct: 122 AELAKEKTDGYKLDRAHIFTVNMFEDFDRFMKVPDEWAPPEVNPYTPGENLQQWLTD 178


>ref|XP_003529057.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           B-like [Glycine max]
          Length = 718

 Score =  241 bits (614), Expect = 1e-61
 Identities = 118/177 (66%), Positives = 145/177 (81%), Gaps = 1/177 (0%)
 Frame = +1

Query: 124 DVIPMSEIETKANQLGIDLSQIDFNSITLPPDEDMGILSDDEEELRKEESVGFETGFGNG 303
           DV+ M EIE  A +LG+DLS +D ++I LPP ED GI+SDDE  + +EE++ FE+GFGN 
Sbjct: 3   DVMVMKEIEDTALRLGVDLSTLDLDAIRLPPGEDCGIVSDDEV-VYQEENLEFESGFGNI 61

Query: 304 IVVDHLPIVGSDKFGRLEEVIRRIFSKHGDIKEDGVWMPVDPYTEKTRGYCFIEYNTTQE 483
           IVVD+LP+V  +KF +LE V+R+I+S+ G IKEDG+WMPVDP TEKT GYCFIEYNT QE
Sbjct: 62  IVVDNLPVVPREKFEKLEGVVRKIYSQIGVIKEDGLWMPVDPETEKTLGYCFIEYNTPQE 121

Query: 484 AELAKEKSHGYKLGKEYI-AVNLLDDFDRFMKVPDEWDPPETKTYTPGENLQQWLTD 651
           AELAKEK+HGYKL + +I AV++ DDFDRFMKVP+EW PPETK Y PGENLQ WLTD
Sbjct: 122 AELAKEKTHGYKLDRAHIFAVSMFDDFDRFMKVPNEWAPPETKPYAPGENLQHWLTD 178


>ref|XP_003522102.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           B-like [Glycine max]
          Length = 718

 Score =  239 bits (609), Expect = 4e-61
 Identities = 117/177 (66%), Positives = 145/177 (81%), Gaps = 1/177 (0%)
 Frame = +1

Query: 124 DVIPMSEIETKANQLGIDLSQIDFNSITLPPDEDMGILSDDEEELRKEESVGFETGFGNG 303
           DV+ M EIE  + +LG+DLS +D ++I LP  ED GI+SDDEE + +EE++ FE+GFGN 
Sbjct: 3   DVMIMKEIEDTSLRLGVDLSTLDLDAIRLPTGEDCGIVSDDEE-VYQEENLEFESGFGNI 61

Query: 304 IVVDHLPIVGSDKFGRLEEVIRRIFSKHGDIKEDGVWMPVDPYTEKTRGYCFIEYNTTQE 483
           IVVD+LP+V  +KF +LE V+R+I+S+ G IKEDG+WMPVDP TEKT GYCFIEYNT QE
Sbjct: 62  IVVDNLPVVPREKFEKLEGVVRKIYSQIGVIKEDGLWMPVDPETEKTLGYCFIEYNTPQE 121

Query: 484 AELAKEKSHGYKLGKEYI-AVNLLDDFDRFMKVPDEWDPPETKTYTPGENLQQWLTD 651
           AELAKEK+HGYKL + +I AV++ DDFDRFMKVP+EW PPETK Y PGENLQ WLTD
Sbjct: 122 AELAKEKTHGYKLDRAHIFAVSMFDDFDRFMKVPNEWAPPETKPYAPGENLQHWLTD 178


>ref|XP_002285591.1| PREDICTED: eukaryotic translation initiation factor 3 subunit B
           [Vitis vinifera] gi|296082169|emb|CBI21174.3| unnamed
           protein product [Vitis vinifera]
          Length = 718

 Score =  236 bits (603), Expect = 2e-60
 Identities = 115/177 (64%), Positives = 143/177 (80%), Gaps = 1/177 (0%)
 Frame = +1

Query: 124 DVIPMSEIETKANQLGIDLSQIDFNSITLPPDEDMGILSDDEEELRKEESVGFETGFGNG 303
           +VI M +I   A+ LGID+S IDF+SI LPP ED GI SDD+  L +E+ + +++GFGN 
Sbjct: 3   EVISMEDIRATASTLGIDVSNIDFDSIRLPPGEDFGITSDDD--LHEEDPLEYDSGFGNI 60

Query: 304 IVVDHLPIVGSDKFGRLEEVIRRIFSKHGDIKEDGVWMPVDPYTEKTRGYCFIEYNTTQE 483
           IVVD+LP+V  +KF +LE V+R+I+S+ G IKEDG+WMPVD  T+KT GYCFIEYNT QE
Sbjct: 61  IVVDNLPVVPREKFEKLEGVVRKIYSQIGVIKEDGLWMPVDSDTQKTLGYCFIEYNTPQE 120

Query: 484 AELAKEKSHGYKLGKEYI-AVNLLDDFDRFMKVPDEWDPPETKTYTPGENLQQWLTD 651
           AELA+EK++GYKL + +I AVN+ DDFDRFMKVPDEW PPETK YTPGENLQ WLTD
Sbjct: 121 AELAREKTNGYKLDRAHIFAVNMFDDFDRFMKVPDEWAPPETKPYTPGENLQHWLTD 177