BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018909
         (1133 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK62788.1|AC027036_9 polyprotein, putative [Arabidopsis thal...   155   4e-65
dbj|BAK41511.1| polyprotein [Arabidopsis thaliana]                    155   4e-65
gb|AAK62793.1|AC027036_14 polyprotein, putative [Arabidopsis tha...   155   4e-65
dbj|BAA78423.1| polyprotein [Arabidopsis thaliana]                    155   4e-65
dbj|BAK41512.1| C-end truncated polyprotein [Arabidopsis thaliana]    155   4e-65

>gb|AAK62788.1|AC027036_9 polyprotein, putative [Arabidopsis thaliana]
           gi|18265373|dbj|BAB84015.1| polyprotein [Arabidopsis
           thaliana]
          Length = 1466

 Score =  155 bits (392), Expect(2) = 4e-65
 Identities = 77/157 (49%), Positives = 101/157 (64%)
 Frame = -1

Query: 473 LPFKNSNEISATFPFSLVHSDVWMSPVVSVSGFRYYVLFTDDYTRYTWIFPMKHKHEVLT 294
           +PF  S  I++T P   ++SDVW SP++S   +RYYV+F D +TRYTW++P+K K +V  
Sbjct: 511 VPFSQST-INSTRPLEYIYSDVWSSPILSHDNYRYYVIFVDHFTRYTWLYPLKQKSQVKE 569

Query: 293 HFQTFHNCVQNIFNTRVKYFQSVGGGEYVNNPFGTYCRQMGIHHRLSCPHTPEQNGLAER 114
            F TF N ++N F TR+  F S  GGE+V      Y  Q GI H  S PHTPE NGL+ER
Sbjct: 570 TFITFKNLLENRFQTRIGTFYSDNGGEFV--ALWEYFSQHGISHLTSPPHTPEHNGLSER 627

Query: 113 KHRHIADMAHTLLATAHVPLNLWVEAVSTAVFLINRL 3
           KHRHI +   TLL+ A +P   W  A + AV+LINRL
Sbjct: 628 KHRHIVETGLTLLSHASIPKTYWPYAFAVAVYLINRL 664



 Score =  120 bits (301), Expect(2) = 4e-65
 Identities = 68/186 (36%), Positives = 99/186 (53%), Gaps = 7/186 (3%)
 Frame = -3

Query: 1014 TPQVDPNWYPDTGATHHMTGNSDLLQYRAPYSGNDYVTLGNGSSLSIQNTGSIPIALGTR 835
            +P    NW  D+GATHH+T + + L    PY+G D V + +GS++ I +TGS  ++  +R
Sbjct: 324  SPYSSNNWLLDSGATHHITSDFNNLSLHQPYTGGDDVMVADGSTIPISHTGSTSLSTKSR 383

Query: 834  KVSLHNVYHVPAMTKNLLSVAKFTHDNNVSFHFTPHGYYITDLSSGVPLFQGPCKDGLY- 658
             ++LHN+ +VP + KNL+SV +  + N VS  F P  + + DL++GVPL QG  KD LY 
Sbjct: 384  PLNLHNILYVPNIHKNLISVYRLCNANGVSVEFFPASFQVKDLNTGVPLLQGKTKDELYE 443

Query: 657  ----XXXXXXXXXXXXXXXXXXTWHNRLGHPNTKVLSFLGSNKLLSSDFQLKHYF--CKG 496
                                  +WH RLGHP   +L+ + SN  LS      H F  C  
Sbjct: 444  WPIASSQPVSLFASPSSKATHSSWHARLGHPAPSILNSVISNYSLSV-LNPSHKFLSCSD 502

Query: 495  CALGKS 478
            C + KS
Sbjct: 503  CLINKS 508


>dbj|BAK41511.1| polyprotein [Arabidopsis thaliana]
          Length = 1466

 Score =  155 bits (392), Expect(2) = 4e-65
 Identities = 77/157 (49%), Positives = 101/157 (64%)
 Frame = -1

Query: 473 LPFKNSNEISATFPFSLVHSDVWMSPVVSVSGFRYYVLFTDDYTRYTWIFPMKHKHEVLT 294
           +PF  S  I++T P   ++SDVW SP++S   +RYYV+F D +TRYTW++P+K K +V  
Sbjct: 511 VPFSQST-INSTRPLEYIYSDVWSSPILSHDNYRYYVIFVDHFTRYTWLYPLKQKSQVKE 569

Query: 293 HFQTFHNCVQNIFNTRVKYFQSVGGGEYVNNPFGTYCRQMGIHHRLSCPHTPEQNGLAER 114
            F TF N ++N F TR+  F S  GGE+V      Y  Q GI H  S PHTPE NGL+ER
Sbjct: 570 TFITFKNLLENRFQTRIGTFYSDNGGEFV--ALWEYFSQHGISHLTSPPHTPEHNGLSER 627

Query: 113 KHRHIADMAHTLLATAHVPLNLWVEAVSTAVFLINRL 3
           KHRHI +   TLL+ A +P   W  A + AV+LINRL
Sbjct: 628 KHRHIVETGLTLLSHASIPKTYWPYAFAVAVYLINRL 664



 Score =  120 bits (301), Expect(2) = 4e-65
 Identities = 68/186 (36%), Positives = 99/186 (53%), Gaps = 7/186 (3%)
 Frame = -3

Query: 1014 TPQVDPNWYPDTGATHHMTGNSDLLQYRAPYSGNDYVTLGNGSSLSIQNTGSIPIALGTR 835
            +P    NW  D+GATHH+T + + L    PY+G D V + +GS++ I +TGS  ++  +R
Sbjct: 324  SPYSSNNWLLDSGATHHITSDFNNLSLHQPYTGGDDVMVADGSTIPISHTGSTSLSTKSR 383

Query: 834  KVSLHNVYHVPAMTKNLLSVAKFTHDNNVSFHFTPHGYYITDLSSGVPLFQGPCKDGLY- 658
             ++LHN+ +VP + KNL+SV +  + N VS  F P  + + DL++GVPL QG  KD LY 
Sbjct: 384  PLNLHNILYVPNIHKNLISVYRLCNANGVSVEFFPASFQVKDLNTGVPLLQGKTKDELYE 443

Query: 657  ----XXXXXXXXXXXXXXXXXXTWHNRLGHPNTKVLSFLGSNKLLSSDFQLKHYF--CKG 496
                                  +WH RLGHP   +L+ + SN  LS      H F  C  
Sbjct: 444  WPIASSQPVSLFASPSSKATHSSWHARLGHPAPSILNSVISNYSLSV-LNPSHKFLSCSD 502

Query: 495  CALGKS 478
            C + KS
Sbjct: 503  CLINKS 508


>gb|AAK62793.1|AC027036_14 polyprotein, putative [Arabidopsis thaliana]
           gi|338746561|dbj|BAK41510.1| polyprotein [Arabidopsis
           thaliana]
          Length = 1466

 Score =  155 bits (392), Expect(2) = 4e-65
 Identities = 77/157 (49%), Positives = 101/157 (64%)
 Frame = -1

Query: 473 LPFKNSNEISATFPFSLVHSDVWMSPVVSVSGFRYYVLFTDDYTRYTWIFPMKHKHEVLT 294
           +PF  S  I++T P   ++SDVW SP++S   +RYYV+F D +TRYTW++P+K K +V  
Sbjct: 511 VPFSQST-INSTRPLEYIYSDVWSSPILSHDNYRYYVIFVDHFTRYTWLYPLKQKSQVKE 569

Query: 293 HFQTFHNCVQNIFNTRVKYFQSVGGGEYVNNPFGTYCRQMGIHHRLSCPHTPEQNGLAER 114
            F TF N ++N F TR+  F S  GGE+V      Y  Q GI H  S PHTPE NGL+ER
Sbjct: 570 TFITFKNLLENRFQTRIGTFYSDNGGEFV--ALWEYFSQHGISHLTSPPHTPEHNGLSER 627

Query: 113 KHRHIADMAHTLLATAHVPLNLWVEAVSTAVFLINRL 3
           KHRHI +   TLL+ A +P   W  A + AV+LINRL
Sbjct: 628 KHRHIVETGLTLLSHASIPKTYWPYAFAVAVYLINRL 664



 Score =  120 bits (301), Expect(2) = 4e-65
 Identities = 68/186 (36%), Positives = 99/186 (53%), Gaps = 7/186 (3%)
 Frame = -3

Query: 1014 TPQVDPNWYPDTGATHHMTGNSDLLQYRAPYSGNDYVTLGNGSSLSIQNTGSIPIALGTR 835
            +P    NW  D+GATHH+T + + L    PY+G D V + +GS++ I +TGS  ++  +R
Sbjct: 324  SPYSSNNWLLDSGATHHITSDFNNLSLHQPYTGGDDVMVADGSTIPISHTGSTSLSTKSR 383

Query: 834  KVSLHNVYHVPAMTKNLLSVAKFTHDNNVSFHFTPHGYYITDLSSGVPLFQGPCKDGLY- 658
             ++LHN+ +VP + KNL+SV +  + N VS  F P  + + DL++GVPL QG  KD LY 
Sbjct: 384  PLNLHNILYVPNIHKNLISVYRLCNANGVSVEFFPASFQVKDLNTGVPLLQGKTKDELYE 443

Query: 657  ----XXXXXXXXXXXXXXXXXXTWHNRLGHPNTKVLSFLGSNKLLSSDFQLKHYF--CKG 496
                                  +WH RLGHP   +L+ + SN  LS      H F  C  
Sbjct: 444  WPIASSQPVSLFASPSSKATHSSWHARLGHPAPSILNSVISNYSLSV-LNPSHKFLSCSD 502

Query: 495  CALGKS 478
            C + KS
Sbjct: 503  CLINKS 508


>dbj|BAA78423.1| polyprotein [Arabidopsis thaliana]
          Length = 1431

 Score =  155 bits (392), Expect(2) = 4e-65
 Identities = 77/157 (49%), Positives = 101/157 (64%)
 Frame = -1

Query: 473 LPFKNSNEISATFPFSLVHSDVWMSPVVSVSGFRYYVLFTDDYTRYTWIFPMKHKHEVLT 294
           +PF  S  I++T P   ++SDVW SP++S   +RYYV+F D +TRYTW++P+K K +V  
Sbjct: 476 VPFSQST-INSTRPLEYIYSDVWSSPILSHDNYRYYVIFVDHFTRYTWLYPLKQKSQVKE 534

Query: 293 HFQTFHNCVQNIFNTRVKYFQSVGGGEYVNNPFGTYCRQMGIHHRLSCPHTPEQNGLAER 114
            F TF N ++N F TR+  F S  GGE+V      Y  Q GI H  S PHTPE NGL+ER
Sbjct: 535 TFITFKNLLENRFQTRIGTFYSDNGGEFV--ALWEYFSQHGISHLTSPPHTPEHNGLSER 592

Query: 113 KHRHIADMAHTLLATAHVPLNLWVEAVSTAVFLINRL 3
           KHRHI +   TLL+ A +P   W  A + AV+LINRL
Sbjct: 593 KHRHIVETGLTLLSHASIPKTYWPYAFAVAVYLINRL 629



 Score =  120 bits (301), Expect(2) = 4e-65
 Identities = 68/186 (36%), Positives = 99/186 (53%), Gaps = 7/186 (3%)
 Frame = -3

Query: 1014 TPQVDPNWYPDTGATHHMTGNSDLLQYRAPYSGNDYVTLGNGSSLSIQNTGSIPIALGTR 835
            +P    NW  D+GATHH+T + + L    PY+G D V + +GS++ I +TGS  ++  +R
Sbjct: 289  SPYSSNNWLLDSGATHHITSDFNNLSLHQPYTGGDDVMVADGSTIPISHTGSTSLSTKSR 348

Query: 834  KVSLHNVYHVPAMTKNLLSVAKFTHDNNVSFHFTPHGYYITDLSSGVPLFQGPCKDGLY- 658
             ++LHN+ +VP + KNL+SV +  + N VS  F P  + + DL++GVPL QG  KD LY 
Sbjct: 349  PLNLHNILYVPNIHKNLISVYRLCNANGVSVEFFPASFQVKDLNTGVPLLQGKTKDELYE 408

Query: 657  ----XXXXXXXXXXXXXXXXXXTWHNRLGHPNTKVLSFLGSNKLLSSDFQLKHYF--CKG 496
                                  +WH RLGHP   +L+ + SN  LS      H F  C  
Sbjct: 409  WPIASSQPVSLFASPSSKATHSSWHARLGHPAPSILNSVISNYSLSV-LNPSHKFLSCSD 467

Query: 495  CALGKS 478
            C + KS
Sbjct: 468  CLINKS 473


>dbj|BAK41512.1| C-end truncated polyprotein [Arabidopsis thaliana]
          Length = 1048

 Score =  155 bits (392), Expect(2) = 4e-65
 Identities = 77/157 (49%), Positives = 101/157 (64%)
 Frame = -1

Query: 473 LPFKNSNEISATFPFSLVHSDVWMSPVVSVSGFRYYVLFTDDYTRYTWIFPMKHKHEVLT 294
           +PF  S  I++T P   ++SDVW SP++S   +RYYV+F D +TRYTW++P+K K +V  
Sbjct: 506 VPFSQST-INSTRPLEYIYSDVWSSPILSHDNYRYYVIFVDHFTRYTWLYPLKQKSQVKE 564

Query: 293 HFQTFHNCVQNIFNTRVKYFQSVGGGEYVNNPFGTYCRQMGIHHRLSCPHTPEQNGLAER 114
            F TF N ++N F TR+  F S  GGE+V      Y  Q GI H  S PHTPE NGL+ER
Sbjct: 565 TFITFKNLLENRFQTRIGTFYSDNGGEFV--ALREYFSQHGISHLTSPPHTPEHNGLSER 622

Query: 113 KHRHIADMAHTLLATAHVPLNLWVEAVSTAVFLINRL 3
           KHRHI +   TLL+ A +P   W  A + AV+LINRL
Sbjct: 623 KHRHIVETGLTLLSHASIPKTYWPYAFAVAVYLINRL 659



 Score =  120 bits (301), Expect(2) = 4e-65
 Identities = 68/186 (36%), Positives = 99/186 (53%), Gaps = 7/186 (3%)
 Frame = -3

Query: 1014 TPQVDPNWYPDTGATHHMTGNSDLLQYRAPYSGNDYVTLGNGSSLSIQNTGSIPIALGTR 835
            +P    NW  D+GATHH+T + + L    PY+G D V + +GS++ I +TGS  ++  +R
Sbjct: 319  SPYSSNNWLLDSGATHHITSDFNNLSLHQPYTGGDDVMVADGSTIPISHTGSTSLSTKSR 378

Query: 834  KVSLHNVYHVPAMTKNLLSVAKFTHDNNVSFHFTPHGYYITDLSSGVPLFQGPCKDGLY- 658
             ++LHN+ +VP + KNL+SV +  + N VS  F P  + + DL++GVPL QG  KD LY 
Sbjct: 379  PLNLHNILYVPNIHKNLISVYRLCNANGVSVEFFPASFQVKDLNTGVPLLQGKTKDELYE 438

Query: 657  ----XXXXXXXXXXXXXXXXXXTWHNRLGHPNTKVLSFLGSNKLLSSDFQLKHYF--CKG 496
                                  +WH RLGHP   +L+ + SN  LS      H F  C  
Sbjct: 439  WPIASSQPVSLFASPSSKATHSSWHARLGHPAPSILNSVISNYSLSV-LNPSHKFLSCSD 497

Query: 495  CALGKS 478
            C + KS
Sbjct: 498  CLINKS 503