BLASTX nr result
ID: Coptis25_contig00018891
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00018891 (383 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002300335.1| predicted protein [Populus trichocarpa] gi|2... 57 2e-06 >ref|XP_002300335.1| predicted protein [Populus trichocarpa] gi|222847593|gb|EEE85140.1| predicted protein [Populus trichocarpa] Length = 1029 Score = 56.6 bits (135), Expect = 2e-06 Identities = 42/120 (35%), Positives = 56/120 (46%), Gaps = 39/120 (32%) Frame = +1 Query: 139 LSVKPSFPAKKRVHVPQCLPSETP------------------------------------ 210 ++ KPSFP KKRV VPQC S T Sbjct: 176 ITSKPSFPTKKRVQVPQCSLSGTSAQPEKLQTGSREIKKDDFKNDSSVSRKNPVVDEKGE 235 Query: 211 ---SPFFWLSNEADNNEDIERLSSQAMDIDRVVETPPQ*HPTFSDIKESDNESLDEA*TK 381 SPFFWL +ED E+ SSQ D+D++++ P PTFSDIK+SD+E+ E+ +K Sbjct: 236 RMLSPFFWL-----RDEDGEK-SSQHTDMDQLLDITPPNVPTFSDIKDSDDENPPESSSK 289