BLASTX nr result

ID: Coptis25_contig00018884 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018884
         (1283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABS52645.1| GEM-like 1 [Vitis vinifera]                            318   2e-84
ref|XP_003602953.1| GLABRA2 expression modulator [Medicago trunc...   317   4e-84
ref|XP_002307347.1| predicted protein [Populus trichocarpa] gi|2...   317   4e-84
emb|CBI19231.3| unnamed protein product [Vitis vinifera]              315   1e-83
ref|XP_002285708.1| PREDICTED: GEM-like 1 [Vitis vinifera]            315   1e-83

>gb|ABS52645.1| GEM-like 1 [Vitis vinifera]
          Length = 284

 Score =  318 bits (814), Expect = 2e-84
 Identities = 152/187 (81%), Positives = 171/187 (91%)
 Frame = -3

Query: 852 ATVKNTVSTVKDVLGKWGKKVGESTKQAEVLAGNVWQHLRTGPSFADAAMGRIAQGTKVI 673
           +++KN + +VKDVLGKWGKK  E+TK+AE LAGN+WQHL+TGPSFADAA+GRIAQGTKV+
Sbjct: 98  SSMKNKMDSVKDVLGKWGKKAAEATKKAEDLAGNMWQHLKTGPSFADAAVGRIAQGTKVL 157

Query: 672 AEGGYEKIFRQTFETVSEEQLQRTYACYLSTSAGPVMGILYISTAKLAFCSDNPLPYKVG 493
           AEGGYEKIF+QTFETV EEQLQ++YACYLSTSAGPVMGILY+ST KLAFCSD+PL YKVG
Sbjct: 158 AEGGYEKIFQQTFETVPEEQLQKSYACYLSTSAGPVMGILYLSTEKLAFCSDSPLSYKVG 217

Query: 492 EQNEWSYYKVVIPLHQLKAVNPSISKVNRAEKYIQVISVDNHEFWFMGFVNYDSAVKYLQ 313
           EQ EWSYYKVVIPLHQLKAVN S SKVN AEKY+Q+ISVDNHEFWFMGFV+YDSAVK LQ
Sbjct: 218 EQTEWSYYKVVIPLHQLKAVNTSTSKVNPAEKYVQIISVDNHEFWFMGFVHYDSAVKNLQ 277

Query: 312 DALQARF 292
            ALQ  F
Sbjct: 278 GALQHHF 284


>ref|XP_003602953.1| GLABRA2 expression modulator [Medicago truncatula]
           gi|355492001|gb|AES73204.1| GLABRA2 expression modulator
           [Medicago truncatula]
          Length = 258

 Score =  317 bits (812), Expect = 4e-84
 Identities = 148/185 (80%), Positives = 170/185 (91%)
 Frame = -3

Query: 849 TVKNTVSTVKDVLGKWGKKVGESTKQAEVLAGNVWQHLRTGPSFADAAMGRIAQGTKVIA 670
           + KNT+ +VKDVLGKWGKK  E+TK+AE LAGN+WQHL+TGPSFADAA+GRIAQGTKV+A
Sbjct: 74  SAKNTLDSVKDVLGKWGKKAAEATKKAEDLAGNMWQHLKTGPSFADAAVGRIAQGTKVLA 133

Query: 669 EGGYEKIFRQTFETVSEEQLQRTYACYLSTSAGPVMGILYISTAKLAFCSDNPLPYKVGE 490
           EGGYEKIFRQTFETV EEQL +TYACYLSTSAGPVMG+LY+STAKLAFCSDNPL Y+ G+
Sbjct: 134 EGGYEKIFRQTFETVPEEQLLKTYACYLSTSAGPVMGVLYLSTAKLAFCSDNPLSYQTGD 193

Query: 489 QNEWSYYKVVIPLHQLKAVNPSISKVNRAEKYIQVISVDNHEFWFMGFVNYDSAVKYLQD 310
           Q +WSYYKVVIPLHQL+AVNPS SK N  EK+IQ+ISVDNHEFWFMGFV YDSAVK++Q+
Sbjct: 194 QTQWSYYKVVIPLHQLRAVNPSTSKANPTEKFIQIISVDNHEFWFMGFVYYDSAVKHIQE 253

Query: 309 ALQAR 295
           ALQ+R
Sbjct: 254 ALQSR 258


>ref|XP_002307347.1| predicted protein [Populus trichocarpa] gi|222856796|gb|EEE94343.1|
           predicted protein [Populus trichocarpa]
          Length = 294

 Score =  317 bits (812), Expect = 4e-84
 Identities = 151/181 (83%), Positives = 166/181 (91%)
 Frame = -3

Query: 843 KNTVSTVKDVLGKWGKKVGESTKQAEVLAGNVWQHLRTGPSFADAAMGRIAQGTKVIAEG 664
           KN +  VKDVLGKWGKK  E+TK+AE LAGN+WQHL+TGPSFADAA+GRIAQGTKV+AEG
Sbjct: 110 KNKMEAVKDVLGKWGKKAAEATKKAEDLAGNMWQHLKTGPSFADAAVGRIAQGTKVLAEG 169

Query: 663 GYEKIFRQTFETVSEEQLQRTYACYLSTSAGPVMGILYISTAKLAFCSDNPLPYKVGEQN 484
           GYEKIFRQTFETV EEQL +T+ACYLSTSAGPVMG+LY+STAKLAFCSDNPL YK+GEQ 
Sbjct: 170 GYEKIFRQTFETVPEEQLVKTFACYLSTSAGPVMGVLYLSTAKLAFCSDNPLSYKIGEQT 229

Query: 483 EWSYYKVVIPLHQLKAVNPSISKVNRAEKYIQVISVDNHEFWFMGFVNYDSAVKYLQDAL 304
           EWSYYKVVIPLHQLKAVNPS SKV  AEKYIQ+ISVDNHEFWFMGFV YD+AVK LQ+AL
Sbjct: 230 EWSYYKVVIPLHQLKAVNPSTSKVKSAEKYIQIISVDNHEFWFMGFVYYDNAVKSLQEAL 289

Query: 303 Q 301
           Q
Sbjct: 290 Q 290


>emb|CBI19231.3| unnamed protein product [Vitis vinifera]
          Length = 203

 Score =  315 bits (808), Expect = 1e-83
 Identities = 151/187 (80%), Positives = 170/187 (90%)
 Frame = -3

Query: 852 ATVKNTVSTVKDVLGKWGKKVGESTKQAEVLAGNVWQHLRTGPSFADAAMGRIAQGTKVI 673
           +++KN + +VKDVLGKWGKK  E+TK+AE LAGN+WQHL+ GPSFADAA+GRIAQGTKV+
Sbjct: 17  SSMKNKMDSVKDVLGKWGKKAAEATKKAEDLAGNMWQHLKMGPSFADAAVGRIAQGTKVL 76

Query: 672 AEGGYEKIFRQTFETVSEEQLQRTYACYLSTSAGPVMGILYISTAKLAFCSDNPLPYKVG 493
           AEGGYEKIF+QTFETV EEQLQ++YACYLSTSAGPVMGILY+ST KLAFCSD+PL YKVG
Sbjct: 77  AEGGYEKIFQQTFETVPEEQLQKSYACYLSTSAGPVMGILYLSTEKLAFCSDSPLSYKVG 136

Query: 492 EQNEWSYYKVVIPLHQLKAVNPSISKVNRAEKYIQVISVDNHEFWFMGFVNYDSAVKYLQ 313
           EQ EWSYYKVVIPLHQLKAVN S SKVN AEKY+Q+ISVDNHEFWFMGFV+YDSAVK LQ
Sbjct: 137 EQTEWSYYKVVIPLHQLKAVNTSTSKVNPAEKYVQIISVDNHEFWFMGFVHYDSAVKNLQ 196

Query: 312 DALQARF 292
            ALQ  F
Sbjct: 197 GALQHHF 203


>ref|XP_002285708.1| PREDICTED: GEM-like 1 [Vitis vinifera]
          Length = 284

 Score =  315 bits (808), Expect = 1e-83
 Identities = 151/187 (80%), Positives = 170/187 (90%)
 Frame = -3

Query: 852 ATVKNTVSTVKDVLGKWGKKVGESTKQAEVLAGNVWQHLRTGPSFADAAMGRIAQGTKVI 673
           +++KN + +VKDVLGKWGKK  E+TK+AE LAGN+WQHL+ GPSFADAA+GRIAQGTKV+
Sbjct: 98  SSMKNKMDSVKDVLGKWGKKAAEATKKAEDLAGNMWQHLKMGPSFADAAVGRIAQGTKVL 157

Query: 672 AEGGYEKIFRQTFETVSEEQLQRTYACYLSTSAGPVMGILYISTAKLAFCSDNPLPYKVG 493
           AEGGYEKIF+QTFETV EEQLQ++YACYLSTSAGPVMGILY+ST KLAFCSD+PL YKVG
Sbjct: 158 AEGGYEKIFQQTFETVPEEQLQKSYACYLSTSAGPVMGILYLSTEKLAFCSDSPLSYKVG 217

Query: 492 EQNEWSYYKVVIPLHQLKAVNPSISKVNRAEKYIQVISVDNHEFWFMGFVNYDSAVKYLQ 313
           EQ EWSYYKVVIPLHQLKAVN S SKVN AEKY+Q+ISVDNHEFWFMGFV+YDSAVK LQ
Sbjct: 218 EQTEWSYYKVVIPLHQLKAVNTSTSKVNPAEKYVQIISVDNHEFWFMGFVHYDSAVKNLQ 277

Query: 312 DALQARF 292
            ALQ  F
Sbjct: 278 GALQHHF 284


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