BLASTX nr result
ID: Coptis25_contig00018875
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00018875 (207 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABA97107.2| Lysosomal Cystine Transporter family protein, exp... 53 3e-11 ref|NP_001066568.1| Os12g0278700 [Oryza sativa Japonica Group] g... 53 3e-11 gb|ABK23234.1| unknown [Picea sitchensis] 52 2e-10 ref|XP_003578719.1| PREDICTED: cystinosin homolog [Brachypodium ... 51 2e-10 ref|XP_002964547.1| hypothetical protein SELMODRAFT_81947 [Selag... 49 7e-10 >gb|ABA97107.2| Lysosomal Cystine Transporter family protein, expressed [Oryza sativa Japonica Group] gi|215695525|dbj|BAG90716.1| unnamed protein product [Oryza sativa Japonica Group] Length = 274 Score = 53.1 bits (126), Expect(2) = 3e-11 Identities = 25/35 (71%), Positives = 28/35 (80%) Frame = +3 Query: 30 VFVALPTQSWLWLI*VFNTIQVFMTVIKYIPQAIM 134 + VA P +WLWLI VFN+IQV MT IKYIPQAIM Sbjct: 139 LIVAWPKSNWLWLIDVFNSIQVGMTAIKYIPQAIM 173 Score = 39.7 bits (91), Expect(2) = 3e-11 Identities = 18/22 (81%), Positives = 19/22 (86%) Frame = +2 Query: 140 RKSTIGWSIGNILLDLLEGMTN 205 RKSTIGWSIGNILLDL G+ N Sbjct: 177 RKSTIGWSIGNILLDLTGGVLN 198 >ref|NP_001066568.1| Os12g0278700 [Oryza sativa Japonica Group] gi|108862476|gb|ABA97108.2| Lysosomal Cystine Transporter family protein, expressed [Oryza sativa Japonica Group] gi|113649075|dbj|BAF29587.1| Os12g0278700 [Oryza sativa Japonica Group] gi|218186660|gb|EEC69087.1| hypothetical protein OsI_37977 [Oryza sativa Indica Group] gi|222616905|gb|EEE53037.1| hypothetical protein OsJ_35759 [Oryza sativa Japonica Group] Length = 268 Score = 53.1 bits (126), Expect(2) = 3e-11 Identities = 25/35 (71%), Positives = 28/35 (80%) Frame = +3 Query: 30 VFVALPTQSWLWLI*VFNTIQVFMTVIKYIPQAIM 134 + VA P +WLWLI VFN+IQV MT IKYIPQAIM Sbjct: 139 LIVAWPKSNWLWLIDVFNSIQVGMTAIKYIPQAIM 173 Score = 39.7 bits (91), Expect(2) = 3e-11 Identities = 18/22 (81%), Positives = 19/22 (86%) Frame = +2 Query: 140 RKSTIGWSIGNILLDLLEGMTN 205 RKSTIGWSIGNILLDL G+ N Sbjct: 177 RKSTIGWSIGNILLDLTGGVLN 198 >gb|ABK23234.1| unknown [Picea sitchensis] Length = 272 Score = 52.4 bits (124), Expect(2) = 2e-10 Identities = 24/41 (58%), Positives = 28/41 (68%) Frame = +3 Query: 12 GFLPQSVFVALPTQSWLWLI*VFNTIQVFMTVIKYIPQAIM 134 G+ S+ +A P SWLWL+ FN IQV MT IKYIPQA M Sbjct: 133 GYAAVSLILAWPNGSWLWLVTCFNLIQVIMTTIKYIPQAYM 173 Score = 37.4 bits (85), Expect(2) = 2e-10 Identities = 17/22 (77%), Positives = 18/22 (81%) Frame = +2 Query: 140 RKSTIGWSIGNILLDLLEGMTN 205 RKST GWSIGNILLDL G+ N Sbjct: 177 RKSTEGWSIGNILLDLSGGLAN 198 >ref|XP_003578719.1| PREDICTED: cystinosin homolog [Brachypodium distachyon] Length = 268 Score = 50.8 bits (120), Expect(2) = 2e-10 Identities = 22/35 (62%), Positives = 28/35 (80%) Frame = +3 Query: 30 VFVALPTQSWLWLI*VFNTIQVFMTVIKYIPQAIM 134 + +A P +WLWLI VF++IQV MT IKYIPQA+M Sbjct: 140 LIIAWPKSNWLWLIDVFSSIQVTMTAIKYIPQAVM 174 Score = 38.9 bits (89), Expect(2) = 2e-10 Identities = 17/22 (77%), Positives = 19/22 (86%) Frame = +2 Query: 140 RKSTIGWSIGNILLDLLEGMTN 205 RKSTIGWSIGNI+LDL G+ N Sbjct: 178 RKSTIGWSIGNIILDLTGGVLN 199 >ref|XP_002964547.1| hypothetical protein SELMODRAFT_81947 [Selaginella moellendorffii] gi|300168276|gb|EFJ34880.1| hypothetical protein SELMODRAFT_81947 [Selaginella moellendorffii] Length = 277 Score = 48.9 bits (115), Expect(2) = 7e-10 Identities = 22/35 (62%), Positives = 26/35 (74%) Frame = +3 Query: 30 VFVALPTQSWLWLI*VFNTIQVFMTVIKYIPQAIM 134 + VA P+ WLWL+ VFN IQ+ MT IKYIPQA M Sbjct: 139 LIVAFPSGRWLWLVQVFNIIQLVMTAIKYIPQAWM 173 Score = 39.3 bits (90), Expect(2) = 7e-10 Identities = 17/22 (77%), Positives = 19/22 (86%) Frame = +2 Query: 140 RKSTIGWSIGNILLDLLEGMTN 205 RKST+GWSIGNILLDL G+ N Sbjct: 177 RKSTVGWSIGNILLDLSGGIAN 198