BLASTX nr result

ID: Coptis25_contig00018858 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018858
         (241 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266717.2| PREDICTED: asparaginyl-tRNA synthetase, chlo...   135   4e-30
ref|XP_003635124.1| PREDICTED: asparaginyl-tRNA synthetase, chlo...   135   4e-30
ref|XP_004147209.1| PREDICTED: asparagine--tRNA ligase, chloropl...   123   2e-26
ref|XP_002309798.1| predicted protein [Populus trichocarpa] gi|2...   122   2e-26
ref|XP_002327980.1| predicted protein [Populus trichocarpa] gi|2...   120   1e-25

>ref|XP_002266717.2| PREDICTED: asparaginyl-tRNA synthetase,
           chloroplastic/mitochondrial-like isoform 1 [Vitis
           vinifera]
          Length = 549

 Score =  135 bits (339), Expect = 4e-30
 Identities = 66/79 (83%), Positives = 71/79 (89%)
 Frame = -3

Query: 239 GEKVRESRKRLRIVDVKGGLDEGLDWLGKKLVVKGWVRTLRVQSSVTFLEVNDGSCLSNM 60
           GEKV E RKRLR+VD+KGG DEGLD LG+ L VKGWVRTLRVQSSV F+EVNDGSCLSNM
Sbjct: 99  GEKVGEFRKRLRVVDIKGGPDEGLDRLGQTLAVKGWVRTLRVQSSVIFIEVNDGSCLSNM 158

Query: 59  QCVINSDADGYDQVESGFI 3
           QCV+NSDADGYDQVESG I
Sbjct: 159 QCVMNSDADGYDQVESGSI 177


>ref|XP_003635124.1| PREDICTED: asparaginyl-tRNA synthetase,
           chloroplastic/mitochondrial-like isoform 2 [Vitis
           vinifera] gi|297744376|emb|CBI37350.3| unnamed protein
           product [Vitis vinifera]
          Length = 584

 Score =  135 bits (339), Expect = 4e-30
 Identities = 66/79 (83%), Positives = 71/79 (89%)
 Frame = -3

Query: 239 GEKVRESRKRLRIVDVKGGLDEGLDWLGKKLVVKGWVRTLRVQSSVTFLEVNDGSCLSNM 60
           GEKV E RKRLR+VD+KGG DEGLD LG+ L VKGWVRTLRVQSSV F+EVNDGSCLSNM
Sbjct: 99  GEKVGEFRKRLRVVDIKGGPDEGLDRLGQTLAVKGWVRTLRVQSSVIFIEVNDGSCLSNM 158

Query: 59  QCVINSDADGYDQVESGFI 3
           QCV+NSDADGYDQVESG I
Sbjct: 159 QCVMNSDADGYDQVESGSI 177


>ref|XP_004147209.1| PREDICTED: asparagine--tRNA ligase,
           chloroplastic/mitochondrial-like [Cucumis sativus]
           gi|449504980|ref|XP_004162346.1| PREDICTED:
           asparagine--tRNA ligase,
           chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 562

 Score =  123 bits (308), Expect = 2e-26
 Identities = 59/79 (74%), Positives = 68/79 (86%)
 Frame = -3

Query: 239 GEKVRESRKRLRIVDVKGGLDEGLDWLGKKLVVKGWVRTLRVQSSVTFLEVNDGSCLSNM 60
           GEKV E RK+LRI ++KGG DEG+D LG+  VV GWVRTLRVQSSVTF+EVNDGSC+SNM
Sbjct: 77  GEKVGEFRKKLRISEIKGGRDEGVDRLGQTFVVMGWVRTLRVQSSVTFMEVNDGSCISNM 136

Query: 59  QCVINSDADGYDQVESGFI 3
           QCVI+S  +GYDQVESG I
Sbjct: 137 QCVIDSTTEGYDQVESGLI 155


>ref|XP_002309798.1| predicted protein [Populus trichocarpa] gi|222852701|gb|EEE90248.1|
           predicted protein [Populus trichocarpa]
          Length = 578

 Score =  122 bits (307), Expect = 2e-26
 Identities = 58/79 (73%), Positives = 68/79 (86%)
 Frame = -3

Query: 239 GEKVRESRKRLRIVDVKGGLDEGLDWLGKKLVVKGWVRTLRVQSSVTFLEVNDGSCLSNM 60
           G +V E RK+L+I D+KGG DEGLD +GK +VV GWVRTLRVQSSVTF+EVNDGSCLSNM
Sbjct: 93  GNRVGEFRKKLKIADIKGGPDEGLDRVGKTIVVMGWVRTLRVQSSVTFIEVNDGSCLSNM 152

Query: 59  QCVINSDADGYDQVESGFI 3
           QCV+  +A+GYDQVESG I
Sbjct: 153 QCVMGLEAEGYDQVESGLI 171


>ref|XP_002327980.1| predicted protein [Populus trichocarpa] gi|222837389|gb|EEE75768.1|
           predicted protein [Populus trichocarpa]
          Length = 574

 Score =  120 bits (300), Expect = 1e-25
 Identities = 54/79 (68%), Positives = 69/79 (87%)
 Frame = -3

Query: 239 GEKVRESRKRLRIVDVKGGLDEGLDWLGKKLVVKGWVRTLRVQSSVTFLEVNDGSCLSNM 60
           G +V E R++L+I D+KGG DEGLD +GK ++V GWVRTLRVQSSVTF+EVNDGSCLSN+
Sbjct: 89  GNRVGEFRRKLKIADIKGGPDEGLDRVGKTIIVMGWVRTLRVQSSVTFIEVNDGSCLSNL 148

Query: 59  QCVINSDADGYDQVESGFI 3
           QCV++ +A+GYDQVESG +
Sbjct: 149 QCVMDLEAEGYDQVESGLV 167


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