BLASTX nr result

ID: Coptis25_contig00018835 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018835
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520734.1| conserved hypothetical protein [Ricinus comm...   123   2e-26
ref|XP_004146982.1| PREDICTED: uncharacterized protein LOC101204...   110   1e-22
emb|CBI28694.3| unnamed protein product [Vitis vinifera]              110   1e-22
ref|XP_002278163.1| PREDICTED: uncharacterized protein LOC100257...   110   1e-22
ref|XP_002300842.1| predicted protein [Populus trichocarpa] gi|2...   109   2e-22

>ref|XP_002520734.1| conserved hypothetical protein [Ricinus communis]
           gi|223540119|gb|EEF41696.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 293

 Score =  123 bits (308), Expect = 2e-26
 Identities = 62/118 (52%), Positives = 80/118 (67%)
 Frame = -3

Query: 356 SHKIKNQKDPFTQNALDFFLSHYKPXXXXXXXXXXXXLADTSSSENVVDSKTGTSFPSTL 177
           S+   N++ PFTQN L+   ++                AD S +  VV+SKTG SFPS +
Sbjct: 52  SYNFNNKERPFTQNVLNLLFANINSLPWGSLSL-----ADASPTTTVVESKTGVSFPSVV 106

Query: 176 NDTQRLLAIGLRRKSVFGLKNVDVYAFGVYADDSDVKNMLGEKYGALSVSELKENKDF 3
            +T+RLL +GLRRKSV GLKN++VYAFGVYADD  VK +LGEKYG +S+SELK+NK F
Sbjct: 107 YETRRLLGVGLRRKSVLGLKNINVYAFGVYADDDQVKKVLGEKYGKISISELKQNKGF 164


>ref|XP_004146982.1| PREDICTED: uncharacterized protein LOC101204632 [Cucumis sativus]
           gi|449529142|ref|XP_004171560.1| PREDICTED:
           uncharacterized LOC101204632 [Cucumis sativus]
          Length = 285

 Score =  110 bits (275), Expect = 1e-22
 Identities = 60/114 (52%), Positives = 79/114 (69%), Gaps = 1/114 (0%)
 Frame = -3

Query: 341 NQKDPFTQNALDF-FLSHYKPXXXXXXXXXXXXLADTSSSENVVDSKTGTSFPSTLNDTQ 165
           N + PF + AL+  F SH  P             A+ S++ +VVDSKTG SFPS + D+Q
Sbjct: 50  NPQTPFLECALNLLFSSHSSPLWASLSL------AENSAASSVVDSKTGFSFPSVIGDSQ 103

Query: 164 RLLAIGLRRKSVFGLKNVDVYAFGVYADDSDVKNMLGEKYGALSVSELKENKDF 3
           +LL IGLRRK++ GLKN++VYAFGVYAD+ D+K  L EKYG L+V+EL+E KDF
Sbjct: 104 QLLGIGLRRKAILGLKNINVYAFGVYADNDDIKESLSEKYGKLTVTELQE-KDF 156


>emb|CBI28694.3| unnamed protein product [Vitis vinifera]
          Length = 332

 Score =  110 bits (275), Expect = 1e-22
 Identities = 60/110 (54%), Positives = 73/110 (66%)
 Frame = -3

Query: 344 KNQKDPFTQNALDFFLSHYKPXXXXXXXXXXXXLADTSSSENVVDSKTGTSFPSTLNDTQ 165
           +N  +PF QNA +FF +H  P             AD  SS  V +SKTG  FPS LND++
Sbjct: 101 QNPINPFLQNAFNFFSNHSSPFWASLSI------ADNPSS--VSESKTGVLFPSILNDSR 152

Query: 164 RLLAIGLRRKSVFGLKNVDVYAFGVYADDSDVKNMLGEKYGALSVSELKE 15
           +LL  GLR+KSV GLKN+DVYAFGVYADD D+K +L EKYG LS SE K+
Sbjct: 153 QLLGTGLRKKSVLGLKNIDVYAFGVYADDGDLKRLLSEKYGKLSFSERKD 202


>ref|XP_002278163.1| PREDICTED: uncharacterized protein LOC100257991 [Vitis vinifera]
          Length = 280

 Score =  110 bits (275), Expect = 1e-22
 Identities = 60/110 (54%), Positives = 73/110 (66%)
 Frame = -3

Query: 344 KNQKDPFTQNALDFFLSHYKPXXXXXXXXXXXXLADTSSSENVVDSKTGTSFPSTLNDTQ 165
           +N  +PF QNA +FF +H  P             AD  SS  V +SKTG  FPS LND++
Sbjct: 49  QNPINPFLQNAFNFFSNHSSPFWASLSI------ADNPSS--VSESKTGVLFPSILNDSR 100

Query: 164 RLLAIGLRRKSVFGLKNVDVYAFGVYADDSDVKNMLGEKYGALSVSELKE 15
           +LL  GLR+KSV GLKN+DVYAFGVYADD D+K +L EKYG LS SE K+
Sbjct: 101 QLLGTGLRKKSVLGLKNIDVYAFGVYADDGDLKRLLSEKYGKLSFSERKD 150


>ref|XP_002300842.1| predicted protein [Populus trichocarpa] gi|222842568|gb|EEE80115.1|
           predicted protein [Populus trichocarpa]
          Length = 296

 Score =  109 bits (273), Expect = 2e-22
 Identities = 60/116 (51%), Positives = 80/116 (68%)
 Frame = -3

Query: 350 KIKNQKDPFTQNALDFFLSHYKPXXXXXXXXXXXXLADTSSSENVVDSKTGTSFPSTLND 171
           K   Q +PF QNAL+   S++              LAD S S  VV++KTG +FPS + +
Sbjct: 57  KNPKQDNPFIQNALNLLFSNH-----LLAPWASLSLADPSPS--VVETKTGAAFPSVIFE 109

Query: 170 TQRLLAIGLRRKSVFGLKNVDVYAFGVYADDSDVKNMLGEKYGALSVSELKENKDF 3
           ++RLL IGLR+K++ GLKN+DVYAFGVYAD  +V+ +L EKYG LSVSELKE+K+F
Sbjct: 110 SRRLLGIGLRKKTILGLKNIDVYAFGVYADADEVRKVLSEKYGKLSVSELKESKEF 165


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