BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018811
         (656 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]   110   3e-22
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...   109   5e-22
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...    99   5e-19
ref|XP_003523538.1| PREDICTED: F-box protein SKIP23-like [Glycin...    98   2e-18
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...    94   2e-17

>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score =  110 bits (274), Expect = 3e-22
 Identities = 69/173 (39%), Positives = 98/173 (56%), Gaps = 14/173 (8%)
 Frame = +1

Query: 7   YGALFGCDLNQPHHPKVSRVAPPIGVHGEETKYLVESGGDLLLVIRTRRYHENTYS---- 174
           YG++  CD++    P+VS +  P    G + +YLVESG +LLLV R   Y + TY     
Sbjct: 225 YGSIAVCDVSGSS-PRVSIIEMP-QQFGGDLQYLVESGEELLLVTR---YLDLTYDVEXD 279

Query: 175 -------SIGFVVCKLNTNEHKWTEVKSLLGHSVFIGDNSSFSLLASDFPGCKPNCIYFT 333
                  +  F VC+L++   +W  V SL   ++F+G+N S SL + DFPGCK NCIY+T
Sbjct: 280 QTSLIYRTTRFQVCRLDSKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYT 339

Query: 334 DDFLEGYYEASDRGVGPHDIGVFNLEDCSFEAHYPLECA---MIIPAPIWIEP 483
           DD+ E  Y+      G  D+G+FNLED S E   PL C+   +  P P+W+ P
Sbjct: 340 DDYSEDNYDGIG---GEQDLGIFNLEDGSIE---PLPCSHFRIRWPPPLWVTP 386


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score =  109 bits (272), Expect = 5e-22
 Identities = 69/173 (39%), Positives = 97/173 (56%), Gaps = 14/173 (8%)
 Frame = +1

Query: 7   YGALFGCDLNQPHHPKVSRVAPPIGVHGEETKYLVESGGDLLLVIRTRRYHENTYS---- 174
           YG++  CD++    P+VS +  P    G + +YLVESG +LLLV R   Y + TY     
Sbjct: 225 YGSIAVCDVSGSS-PRVSIIEMP-QQFGGDLQYLVESGEELLLVTR---YLDLTYDVEPD 279

Query: 175 -------SIGFVVCKLNTNEHKWTEVKSLLGHSVFIGDNSSFSLLASDFPGCKPNCIYFT 333
                  +  F VC+L+    +W  V SL   ++F+G+N S SL + DFPGCK NCIY+T
Sbjct: 280 QTSLIYRTTRFQVCRLDLKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYT 339

Query: 334 DDFLEGYYEASDRGVGPHDIGVFNLEDCSFEAHYPLECA---MIIPAPIWIEP 483
           DD+ E  Y+      G  D+G+FNLED S E   PL C+   +  P P+W+ P
Sbjct: 340 DDYSEDNYDGIG---GEQDLGIFNLEDGSIE---PLPCSHFRIRWPPPLWVTP 386


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score = 99.4 bits (246), Expect = 5e-19
 Identities = 66/169 (39%), Positives = 88/169 (52%), Gaps = 11/169 (6%)
 Frame = +1

Query: 10  GALFGCDLNQPHHPKVSRVAPPIGVHGEETKYLVESGGDLLLVIRTR----RYHENTYSS 177
           G +  CD+N  + PKVS +  P  + G+  +YLV SG  LLLV R       +    Y +
Sbjct: 230 GQIVVCDVNG-NSPKVSFIETPRQIGGD-MQYLVSSGDGLLLVTRYLDLDVEFDIFIYKT 287

Query: 178 IGFVVCKLNTNEHKWTEVKSLLGHSVFIGDNSSFSLLASDFPGCKPNCIYFTDDFLEGYY 357
             F V KL+ N  +W  V SL    +FIG+NSS +L AS   GC  +CIY+TDD+    Y
Sbjct: 288 ARFEVFKLDLNGPRWERVTSLGDMMLFIGENSSLALSASGLSGCMGDCIYYTDDYSANNY 347

Query: 358 EASDRGVGPHDIGVFNLEDCSFEAHYPLEC-------AMIIPAPIWIEP 483
              D  +G HD+G+F L D S E   PL C        +  P P+WI P
Sbjct: 348 ---DGHIGEHDLGIFKLSDGSIE---PLPCYPRNSYSRLQWPPPLWISP 390


>ref|XP_003523538.1| PREDICTED: F-box protein SKIP23-like [Glycine max]
          Length = 393

 Score = 97.8 bits (242), Expect = 2e-18
 Identities = 64/177 (36%), Positives = 84/177 (47%), Gaps = 19/177 (10%)
 Frame = +1

Query: 10  GALFGCDLNQ---PHHPKVSRVAPPIGVHGEETKYLVESGGDLLLVIRTR---------R 153
           G +  CD  +   P    + +   P G  G+   Y V S GD+LL+IR            
Sbjct: 221 GTIAVCDAGEGCFPPRVSIIQTTTPFGFAGD-IHYAVFSAGDMLLLIRVLDQDFSDHAGE 279

Query: 154 YHENTYSSIGFVVCKLNTNEHKWTEVKSLLGHSVFIGDNSSFSLLASDFPGCKPNCIYFT 333
             +  Y ++GF V K+N     W  V++L    +F+G NSS S  ASDF GC  +CIYFT
Sbjct: 280 ESDLVYRTVGFEVFKMNWGLLTWQRVETLGERVLFVGGNSSLSFCASDFVGCSADCIYFT 339

Query: 334 DDFLEGYYEASDRGVGPHDIGVFNLEDCSFEAHYPLEC-------AMIIPAPIWIEP 483
           DD+ E      D   G HD+GVF L D S E   PL C        +  P PIW+ P
Sbjct: 340 DDYSE---SNDDDACGKHDLGVFRLRDKSIE---PLPCFNQNSCSRLRWPLPIWVSP 390


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 63/175 (36%), Positives = 90/175 (51%), Gaps = 17/175 (9%)
 Frame = +1

Query: 10  GALFGCDLNQPHHPKVSRVAPPIGVHGEETKYLVESGGDLLLVIRTRRYHEN-------- 165
           G +  CD++    P+VS +  P    G+  +YLV SG +LLLV R               
Sbjct: 229 GQIVICDISSDS-PRVSFMETPRQAGGD-MQYLVNSGDELLLVTRYLDLEYEFDHPDMEP 286

Query: 166 --TYSSIGFVVCKLNTNEHKWTEVKSLLGHSVFIGDNSSFSLLASDFPGCKPNCIYFTDD 339
              Y +I F V +L+ N  +W  + +L   ++FIG+NSS SL A+DF GC  NCIY+TDD
Sbjct: 287 HLIYRTIRFEVFRLDWNGPQWLRMSTLGDKALFIGENSSLSLSATDFSGCMGNCIYYTDD 346

Query: 340 FLEGYYEASDRGVGPHDIGVFNLEDCSFEAHYPLEC-------AMIIPAPIWIEP 483
           +L+  Y   D   G HD+G+F L D + E   PL C        +    P+W+ P
Sbjct: 347 YLDANY---DGHFGDHDLGIFKLCDETIE---PLPCYPRNFTSPLQWSPPLWVSP 395