BLASTX nr result
ID: Coptis25_contig00018800
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00018800 (646 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ACH87172.1| zinc finger protein LSD2-like protein [Camellia s... 114 2e-23 ref|XP_002273964.1| PREDICTED: protein LOL2 [Vitis vinifera] gi|... 100 2e-19 ref|XP_003529323.1| PREDICTED: protein LOL2-like [Glycine max] 100 2e-19 ref|XP_002519059.1| conserved hypothetical protein [Ricinus comm... 100 2e-19 ref|XP_003566876.1| PREDICTED: uncharacterized protein LOC100840... 93 4e-17 >gb|ACH87172.1| zinc finger protein LSD2-like protein [Camellia sinensis] Length = 236 Score = 114 bits (285), Expect = 2e-23 Identities = 67/187 (35%), Positives = 91/187 (48%), Gaps = 6/187 (3%) Frame = +2 Query: 11 DSPPPGWES---QKQEANSDSPPPPGFES---NENNTKNNSPSQKQSSTLVVVVDSNKKN 172 D PPPGW +K+E + D PPPG++S ++ T +P+ V N + Sbjct: 50 DGPPPGWTQIAVKKEEEDDDDGPPPGWQSIPPSQPPTITPAPTTPPPPPAVASGSGNAAH 109 Query: 173 YSPSQHSPLPPGSSPCQQHXXXXXXXXXXXXXXXXXXGIPTREVGQMICGVCRSLISYPK 352 Q P GS+ + E+GQM+CG C+ L+SYP+ Sbjct: 110 TQLQQQPPKQEGSAKAARTQLQQELPKQEAV-----------EMGQMVCGSCQELLSYPR 158 Query: 353 GAGRVKCPGCQTVNHVLEAQQVGLVKCGSCSVLLMYKYEXXXXXXXXXXXXTQIGVDNKR 532 GA V+C CQTVN+ LE +VG VKCG C+VLLMY Y T+IG N+R Sbjct: 159 GARLVRCLCCQTVNYCLEEHEVGQVKCGGCAVLLMYPYGAPFVKCSSCCFVTEIGEHNRR 218 Query: 533 PLISVQQ 553 P +SVQQ Sbjct: 219 PPLSVQQ 225 >ref|XP_002273964.1| PREDICTED: protein LOL2 [Vitis vinifera] gi|302144197|emb|CBI23324.3| unnamed protein product [Vitis vinifera] Length = 141 Score = 100 bits (250), Expect = 2e-19 Identities = 51/93 (54%), Positives = 61/93 (65%), Gaps = 1/93 (1%) Frame = +2 Query: 299 EVGQMICGVCRSLISYPKGAGRVKCPGCQTVNHVLEAQQVGLVKCGSCSVLLMYKYEXXX 478 E+ QM+CG CR L+SYP+G V+C CQTVN VLEA QVG VKCGSC+VLLMY Y Sbjct: 45 EMAQMVCGSCRRLLSYPQGTRHVECSCCQTVNFVLEAHQVGQVKCGSCAVLLMYPYGAPS 104 Query: 479 XXXXXXXXXTQIGVDNKRPLISVQQVHS-PSHN 574 T+IGV N+R +SVQQ H P H+ Sbjct: 105 VRCSSCRFVTEIGVHNRRLPLSVQQGHQLPLHS 137 >ref|XP_003529323.1| PREDICTED: protein LOL2-like [Glycine max] Length = 128 Score = 100 bits (249), Expect = 2e-19 Identities = 53/90 (58%), Positives = 58/90 (64%), Gaps = 2/90 (2%) Frame = +2 Query: 290 PTREVG--QMICGVCRSLISYPKGAGRVKCPGCQTVNHVLEAQQVGLVKCGSCSVLLMYK 463 P R G QM+CG CR L+SYP+GA VKC CQTVN VLEA QVG VKCGSC+VLLMY Sbjct: 29 PPRPSGWAQMVCGSCRRLLSYPRGAKHVKCSCCQTVNIVLEADQVGQVKCGSCAVLLMYP 88 Query: 464 YEXXXXXXXXXXXXTQIGVDNKRPLISVQQ 553 Y T+IG NKRP SVQQ Sbjct: 89 YGASQVRCSSCRFVTEIGAHNKRPPWSVQQ 118 >ref|XP_002519059.1| conserved hypothetical protein [Ricinus communis] gi|223541722|gb|EEF43270.1| conserved hypothetical protein [Ricinus communis] Length = 142 Score = 100 bits (249), Expect = 2e-19 Identities = 47/93 (50%), Positives = 58/93 (62%) Frame = +2 Query: 290 PTREVGQMICGVCRSLISYPKGAGRVKCPGCQTVNHVLEAQQVGLVKCGSCSVLLMYKYE 469 P+ E+ QM+CG CR+L+SYP+GA V+C CQ VN VLEA +VG V CG C +LLMY Y Sbjct: 47 PSSEMAQMVCGSCRTLLSYPRGARHVQCSSCQMVNFVLEAHEVGQVNCGKCEILLMYPYP 106 Query: 470 XXXXXXXXXXXXTQIGVDNKRPLISVQQVHSPS 568 T+IG NKRP SV Q H P+ Sbjct: 107 ASSVRCSSCCSVTEIGAHNKRPPWSVIQGHPPN 139 >ref|XP_003566876.1| PREDICTED: uncharacterized protein LOC100840817 [Brachypodium distachyon] Length = 939 Score = 93.2 bits (230), Expect = 4e-17 Identities = 44/90 (48%), Positives = 56/90 (62%) Frame = +2 Query: 296 REVGQMICGVCRSLISYPKGAGRVKCPGCQTVNHVLEAQQVGLVKCGSCSVLLMYKYEXX 475 +E+GQM+CG CR L++YP+GA V+C GC T+N VLEA +VG V CG C LLMY + Sbjct: 841 KEMGQMVCGCCRELLAYPRGAVHVQCAGCLTINLVLEAHEVGKVHCGRCETLLMYPFGAP 900 Query: 476 XXXXXXXXXXTQIGVDNKRPLISVQQVHSP 565 T+IG RP ISV+QV P Sbjct: 901 AVKCSLCLFVTEIGERKVRPRISVEQVVPP 930