BLASTX nr result

ID: Coptis25_contig00018796 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018796
         (490 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001241560.1| uncharacterized protein LOC100814321 [Glycin...   208   4e-52
ref|XP_002264091.1| PREDICTED: putative deoxyribonuclease TATDN1...   206   2e-51
ref|XP_002524070.1| TatD DNase domain-containing deoxyribonuclea...   204   5e-51
gb|AFK49546.1| unknown [Lotus japonicus]                              201   7e-50
ref|XP_002323375.1| predicted protein [Populus trichocarpa] gi|2...   200   1e-49

>ref|NP_001241560.1| uncharacterized protein LOC100814321 [Glycine max]
           gi|255648299|gb|ACU24602.1| unknown [Glycine max]
          Length = 319

 Score =  208 bits (529), Expect = 4e-52
 Identities = 97/121 (80%), Positives = 107/121 (88%)
 Frame = -3

Query: 488 IGVNGCSLKTPENLDVVRGIPVERMMIETDSPYCEIKSTHAGINFVKSVWPSKKKEKYNH 309
           IG+NGCSLKT ENLDVV+GIPVERMMIETDSPYCEIK+THAGI FVKS WPSKKKEKY+ 
Sbjct: 197 IGINGCSLKTTENLDVVKGIPVERMMIETDSPYCEIKNTHAGIGFVKSTWPSKKKEKYDQ 256

Query: 308 ESIVKGRNEPCLVGQVLEVVGGCKQIGDIGQLSKILHRNTCRVFFPHDLDSIADALLSGG 129
           E IVKGRNEPCLV QVLEVV GCK I D+  LS+ L+ NTCR+FFPHDLDS ADALL+GG
Sbjct: 257 ECIVKGRNEPCLVKQVLEVVAGCKGINDVSNLSRTLYHNTCRIFFPHDLDSAADALLAGG 316

Query: 128 S 126
           +
Sbjct: 317 N 317


>ref|XP_002264091.1| PREDICTED: putative deoxyribonuclease TATDN1 [Vitis vinifera]
           gi|296089369|emb|CBI39141.3| unnamed protein product
           [Vitis vinifera]
          Length = 320

 Score =  206 bits (524), Expect = 2e-51
 Identities = 99/119 (83%), Positives = 106/119 (89%)
 Frame = -3

Query: 488 IGVNGCSLKTPENLDVVRGIPVERMMIETDSPYCEIKSTHAGINFVKSVWPSKKKEKYNH 309
           IGVNGCSLKT ENL+VVRGIPVER+MIETDSPYCEIK+THAGINFVKS+WPSKKKEKY  
Sbjct: 197 IGVNGCSLKTAENLEVVRGIPVERLMIETDSPYCEIKNTHAGINFVKSLWPSKKKEKYEQ 256

Query: 308 ESIVKGRNEPCLVGQVLEVVGGCKQIGDIGQLSKILHRNTCRVFFPHDLDSIADALLSG 132
           E IVKGRNEPCLV QVLEVV GCK + DI QLSK L+ NTCRVFFP DLDS ADALL+G
Sbjct: 257 ECIVKGRNEPCLVRQVLEVVAGCKGVSDIEQLSKTLYNNTCRVFFPQDLDSAADALLAG 315


>ref|XP_002524070.1| TatD DNase domain-containing deoxyribonuclease, putative [Ricinus
           communis] gi|223536638|gb|EEF38280.1| TatD DNase
           domain-containing deoxyribonuclease, putative [Ricinus
           communis]
          Length = 304

 Score =  204 bits (520), Expect = 5e-51
 Identities = 98/124 (79%), Positives = 107/124 (86%)
 Frame = -3

Query: 488 IGVNGCSLKTPENLDVVRGIPVERMMIETDSPYCEIKSTHAGINFVKSVWPSKKKEKYNH 309
           IGVNGCSLKT ENLDVV+GIPVERMMIETDSPYCEIKSTHAGI+ VKS WPSKKKEKY+ 
Sbjct: 181 IGVNGCSLKTSENLDVVKGIPVERMMIETDSPYCEIKSTHAGISLVKSFWPSKKKEKYDQ 240

Query: 308 ESIVKGRNEPCLVGQVLEVVGGCKQIGDIGQLSKILHRNTCRVFFPHDLDSIADALLSGG 129
           + IVKGRNEPCL+ QVLEVV GCK +  I QLS+ ++ NTCRVFFPHDLDS ADALLSGG
Sbjct: 241 DCIVKGRNEPCLIRQVLEVVAGCKGVVGIDQLSRTIYHNTCRVFFPHDLDSAADALLSGG 300

Query: 128 SDMQ 117
              Q
Sbjct: 301 PGAQ 304


>gb|AFK49546.1| unknown [Lotus japonicus]
          Length = 320

 Score =  201 bits (510), Expect = 7e-50
 Identities = 95/119 (79%), Positives = 105/119 (88%)
 Frame = -3

Query: 488 IGVNGCSLKTPENLDVVRGIPVERMMIETDSPYCEIKSTHAGINFVKSVWPSKKKEKYNH 309
           IGVNGCSLKT ENLDVV+GIPVERMMIETDSPYCEIK+THAGI FV+S WPSKKKEK++ 
Sbjct: 198 IGVNGCSLKTTENLDVVKGIPVERMMIETDSPYCEIKNTHAGIGFVRSKWPSKKKEKHDQ 257

Query: 308 ESIVKGRNEPCLVGQVLEVVGGCKQIGDIGQLSKILHRNTCRVFFPHDLDSIADALLSG 132
           E +VKGRNEPCLV QVLEVV GCK I D+  LS+ L+ NTCRVFFP DLDS+ADALLSG
Sbjct: 258 ECVVKGRNEPCLVRQVLEVVAGCKGINDVDDLSRTLYHNTCRVFFPQDLDSLADALLSG 316


>ref|XP_002323375.1| predicted protein [Populus trichocarpa] gi|222868005|gb|EEF05136.1|
           predicted protein [Populus trichocarpa]
          Length = 304

 Score =  200 bits (508), Expect = 1e-49
 Identities = 96/124 (77%), Positives = 106/124 (85%)
 Frame = -3

Query: 488 IGVNGCSLKTPENLDVVRGIPVERMMIETDSPYCEIKSTHAGINFVKSVWPSKKKEKYNH 309
           IGVNGCSLKTPENLDVV GIPVE+MMIETDSPYCEIK++HAGI FVKS WPSKKKEK+  
Sbjct: 181 IGVNGCSLKTPENLDVVSGIPVEKMMIETDSPYCEIKNSHAGIKFVKSTWPSKKKEKHEQ 240

Query: 308 ESIVKGRNEPCLVGQVLEVVGGCKQIGDIGQLSKILHRNTCRVFFPHDLDSIADALLSGG 129
           + IVKGRNEPCLV QVLEVV GCK I +I Q+S+ ++ NTCRVFFP DLDS ADALLSG 
Sbjct: 241 DCIVKGRNEPCLVRQVLEVVAGCKGITEIEQMSRTIYHNTCRVFFPQDLDSAADALLSGH 300

Query: 128 SDMQ 117
            D Q
Sbjct: 301 LDSQ 304


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