BLASTX nr result

ID: Coptis25_contig00018790 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018790
         (1703 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271842.1| PREDICTED: uncharacterized protein LOC100252...    60   2e-06
ref|XP_004168905.1| PREDICTED: uncharacterized protein LOC101232...    53   9e-06

>ref|XP_002271842.1| PREDICTED: uncharacterized protein LOC100252260 [Vitis vinifera]
          Length = 365

 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 56/211 (26%), Positives = 94/211 (44%), Gaps = 3/211 (1%)
 Frame = +3

Query: 3   IIPSVNYLRSFLPNQNQFTALVI--RWSWVLHEPERVMGKNINTLRECGCPEKHISQLMF 176
           IIP +++L+  LP  ++  +L+   R +WV+++    M  NI TLR  G PE +I +++ 
Sbjct: 131 IIPCISFLKKVLPTDHKIASLLTAKRGTWVVYKFSEQMVPNIETLRSHGVPESNILRMLI 190

Query: 177 WNPRNLCYNSDHFRELVFDIIKGLGVRPRSRYFMVRLNHLLTAQRGV*EARXXXXXXXXX 356
             PR L +N+D F+  +   +K +G   +   F+  +  L   ++   E++         
Sbjct: 191 LRPRTLSFNADEFK-AILKRVKEMGFDEKGMMFIHGMCALCGMKKAKWESKVSVFRSFGW 249

Query: 357 XXXGRCGYLFV*EPAFFCSVSGDGNESTGGFCYIDVELDTXXXXXXXXXXALRLVKRIIP 536
                   LFV +P F  S S         F   ++               L L KR++P
Sbjct: 250 GEEEFIA-LFVKQPQFM-SNSETRIRKCLDFLINELNWMPEDIFKYPMVLLLSLEKRVVP 307

Query: 537 ISCSLNLAI-KGSAK*RWCGQA*RVAEDVFL 626
            S  L L I KG    R  G+A  ++ED F+
Sbjct: 308 RSRVLQLLIGKGLVTRRSIGRALIISEDRFM 338


>ref|XP_004168905.1| PREDICTED: uncharacterized protein LOC101232607 [Cucumis sativus]
          Length = 373

 Score = 52.8 bits (125), Expect(2) = 9e-06
 Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
 Frame = +3

Query: 9   PSVNYLRSFLPNQNQFTALVIRWSWVL-HEPERVMGKNINTLRECGCPEKHISQLMFWNP 185
           PS   ++  L +  Q TA + R SW+L ++ +RV+  NI+ L   G P +++++++  NP
Sbjct: 139 PSFRLIKEMLKSDEQVTAAICRSSWLLTYDSKRVIKPNIDVLVNEGVPSRNLAKMIALNP 198

Query: 186 RNLCYNSDHFRELVFDIIKGLGVRPRSRYF 275
           R +    D     V   +K LGV P+ R F
Sbjct: 199 RTIMQKVDRMIHAV-KTVKELGVEPKDRVF 227



 Score = 24.6 bits (52), Expect(2) = 9e-06
 Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = +1

Query: 364 WVDVVIF-LFKNQPFFVACLVMEMNPLVDFAI*T 462
           W +  IF  FK  P+ +AC   ++  +VDF   T
Sbjct: 254 WPENEIFKAFKTDPYILACSEAKIRDVVDFCFNT 287


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