BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018778
         (1200 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...    88   4e-15
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]    87   6e-15
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    85   3e-14
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...    82   2e-13
ref|XP_003523538.1| PREDICTED: F-box protein SKIP23-like [Glycin...    82   3e-13

>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score = 88.2 bits (217), Expect = 4e-15
 Identities = 60/157 (38%), Positives = 86/157 (54%), Gaps = 5/157 (3%)
 Frame = +3

Query: 42  MIYYADQFYFVDDSGRVFSCDLNQLHEPQVPTVAPPPYSIRIGCVEEVKYLVDSGGDLLL 221
           +IY+   FY V+ +G++  CD+N  + P+V  +  P    +IG   +++YLV SG  LLL
Sbjct: 216 VIYFNGLFYAVNKAGQIVVCDVNG-NSPKVSFIETPR---QIG--GDMQYLVSSGDGLLL 269

Query: 222 IKRLRVYDDT-----YYSLGFVVYKLNSIDRKWIEVKSLLGHSVFLGGNGSVSLLASDFP 386
           + R    D       Y +  F V+KL+    +W  V SL    +F+G N S++L AS   
Sbjct: 270 VTRYLDLDVEFDIFIYKTARFEVFKLDLNGPRWERVTSLGDMMLFIGENSSLALSASGLS 329

Query: 387 GCKPDCIYFTDDYIGCYVYGGVEIGPCDIGVFNLVDG 497
           GC  DCIY+TDDY     Y G  IG  D+G+F L DG
Sbjct: 330 GCMGDCIYYTDDY-SANNYDG-HIGEHDLGIFKLSDG 364


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score = 87.4 bits (215), Expect = 6e-15
 Identities = 67/182 (36%), Positives = 96/182 (52%), Gaps = 20/182 (10%)
 Frame = +3

Query: 42  MIYYADQFYFVDDSGRVFSCDLNQLHEPQVPTVAPPPYSIRIGCVEEVKYLVDSGGDLLL 221
           +I++   FY V+  G +  CD++    P+V  +  P    + G   +++YLV+SG +LLL
Sbjct: 212 VIFHRGLFYAVNKYGSIAVCDVSG-SSPRVSIIEMPQ---QFG--GDLQYLVESGEELLL 265

Query: 222 IKRLR--VYDDT-------YYSLGFVVYKLNSIDRKWIEVKSLLGHSVFLGGNGSVSLLA 374
           + R     YD         Y +  F V +L+S   +W  V SL   ++FLG N S+SL +
Sbjct: 266 VTRYLDLTYDVEXDQTSLIYRTTRFQVCRLDSKAPRWEVVSSLGDRALFLGENLSLSLSS 325

Query: 375 SDFPGCKPDCIYFTDDYIGCYVYGGVEIGPCDIGVFNLVDG-----------IRWSPQGS 521
            DFPGCK +CIY+TDDY     Y G+  G  D+G+FNL DG           IRW P   
Sbjct: 326 VDFPGCKGNCIYYTDDYSEDN-YDGIG-GEQDLGIFNLEDGSIEPLPCSHFRIRWPP--P 381

Query: 522 LW 527
           LW
Sbjct: 382 LW 383


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score = 85.1 bits (209), Expect = 3e-14
 Identities = 66/182 (36%), Positives = 95/182 (52%), Gaps = 20/182 (10%)
 Frame = +3

Query: 42  MIYYADQFYFVDDSGRVFSCDLNQLHEPQVPTVAPPPYSIRIGCVEEVKYLVDSGGDLLL 221
           +I++   FY V+  G +  CD++    P+V  +  P    + G   +++YLV+SG +LLL
Sbjct: 212 VIFHRGLFYAVNKYGSIAVCDVSG-SSPRVSIIEMPQ---QFG--GDLQYLVESGEELLL 265

Query: 222 IKRLR--VYDDT-------YYSLGFVVYKLNSIDRKWIEVKSLLGHSVFLGGNGSVSLLA 374
           + R     YD         Y +  F V +L+    +W  V SL   ++FLG N S+SL +
Sbjct: 266 VTRYLDLTYDVEPDQTSLIYRTTRFQVCRLDLKAPRWEVVSSLGDRALFLGENLSLSLSS 325

Query: 375 SDFPGCKPDCIYFTDDYIGCYVYGGVEIGPCDIGVFNLVDG-----------IRWSPQGS 521
            DFPGCK +CIY+TDDY     Y G+  G  D+G+FNL DG           IRW P   
Sbjct: 326 VDFPGCKGNCIYYTDDYSEDN-YDGIG-GEQDLGIFNLEDGSIEPLPCSHFRIRWPP--P 381

Query: 522 LW 527
           LW
Sbjct: 382 LW 383


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score = 82.4 bits (202), Expect = 2e-13
 Identities = 52/162 (32%), Positives = 88/162 (54%), Gaps = 11/162 (6%)
 Frame = +3

Query: 42  MIYYADQFYFVDDSGRVFSCDLNQLHEPQVPTVAPPPYSIRIGCVEEVKYLVDSGGDLLL 221
           +I+    FY V+ +G++  CD++    P+V  +  P  +       +++YLV+SG +LLL
Sbjct: 215 VIFVNGMFYAVNKAGQIVICDISS-DSPRVSFMETPRQA-----GGDMQYLVNSGDELLL 268

Query: 222 IKR---LRVYDD--------TYYSLGFVVYKLNSIDRKWIEVKSLLGHSVFLGGNGSVSL 368
           + R   L    D         Y ++ F V++L+    +W+ + +L   ++F+G N S+SL
Sbjct: 269 VTRYLDLEYEFDHPDMEPHLIYRTIRFEVFRLDWNGPQWLRMSTLGDKALFIGENSSLSL 328

Query: 369 LASDFPGCKPDCIYFTDDYIGCYVYGGVEIGPCDIGVFNLVD 494
            A+DF GC  +CIY+TDDY+     G    G  D+G+F L D
Sbjct: 329 SATDFSGCMGNCIYYTDDYLDANYDG--HFGDHDLGIFKLCD 368


>ref|XP_003523538.1| PREDICTED: F-box protein SKIP23-like [Glycine max]
          Length = 393

 Score = 81.6 bits (200), Expect = 3e-13
 Identities = 56/161 (34%), Positives = 79/161 (49%), Gaps = 10/161 (6%)
 Frame = +3

Query: 42  MIYYADQFYFVDDSGRVFSCDLNQLHEPQVPTVAPPPYSIRIGCVEEVKYLVDSGGDLLL 221
           ++ Y   F+ V   G +  CD  +   P  P V+    +   G   ++ Y V S GD+LL
Sbjct: 207 VVNYNGLFFAVSKGGTIAVCDAGEGCFP--PRVSIIQTTTPFGFAGDIHYAVFSAGDMLL 264

Query: 222 IKRLRVYDDT----------YYSLGFVVYKLNSIDRKWIEVKSLLGHSVFLGGNGSVSLL 371
           + R+   D +          Y ++GF V+K+N     W  V++L    +F+GGN S+S  
Sbjct: 265 LIRVLDQDFSDHAGEESDLVYRTVGFEVFKMNWGLLTWQRVETLGERVLFVGGNSSLSFC 324

Query: 372 ASDFPGCKPDCIYFTDDYIGCYVYGGVEIGPCDIGVFNLVD 494
           ASDF GC  DCIYFTDDY           G  D+GVF L D
Sbjct: 325 ASDFVGCSADCIYFTDDY--SESNDDDACGKHDLGVFRLRD 363