BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018771
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308888.1| predicted protein [Populus trichocarpa] gi|2...    99   7e-20
ref|XP_002522167.1| pentatricopeptide repeat-containing protein,...    93   2e-17
ref|XP_002322619.1| predicted protein [Populus trichocarpa] gi|2...    88   8e-17
gb|ADN33879.1| DNA-binding protein [Cucumis melo subsp. melo]          89   3e-16
emb|CBI30135.3| unnamed protein product [Vitis vinifera]               89   4e-16

>ref|XP_002308888.1| predicted protein [Populus trichocarpa] gi|222854864|gb|EEE92411.1|
           predicted protein [Populus trichocarpa]
          Length = 555

 Score = 98.6 bits (244), Expect(2) = 7e-20
 Identities = 46/92 (50%), Positives = 67/92 (72%), Gaps = 7/92 (7%)
 Frame = -2

Query: 256 NLKENRWASRILLPLY-------KIGTISKICDPNPCVEVCFGCY*SLGKVGKVEEAEAV 98
           NL+E+RWA R +LPLY       ++  + K C+ +P ++ C     + G++ K++EAEAV
Sbjct: 322 NLEEHRWACRFMLPLYGALGKADEVSRVWKFCEKSPRLDECMAAIEAWGRLKKIDEAEAV 381

Query: 97  FDRMTQTWKKLSSRNYNTLLKVYANHKMPTKG 2
           F+ M++TWKKLSSR+Y+TLLKVYANHKM +KG
Sbjct: 382 FELMSKTWKKLSSRHYSTLLKVYANHKMLSKG 413



 Score = 23.5 bits (49), Expect(2) = 7e-20
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 341 TQGLFVRHYVTGG 303
           TQ +  RHYV+GG
Sbjct: 294 TQAIMARHYVSGG 306


>ref|XP_002522167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538605|gb|EEF40208.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 342

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 45/92 (48%), Positives = 64/92 (69%), Gaps = 7/92 (7%)
 Frame = -2

Query: 256 NLKENRWASRILLPLY-------KIGTISKICDPNPCVEVCFGCY*SLGKVGKVEEAEAV 98
           NL+E+RWA R+LLPLY       ++  + K+C+ +P +E C     + GK+ K+++AE V
Sbjct: 109 NLEEHRWACRLLLPLYAALGKADEVERVWKVCESSPQLEECVAVIEAWGKLKKIDKAEEV 168

Query: 97  FDRMTQTWKKLSSRNYNTLLKVYANHKMPTKG 2
           F+RM  TWKKLSSR+Y+ LLKVYA+HKM   G
Sbjct: 169 FNRMLTTWKKLSSRHYSALLKVYASHKMLANG 200


>ref|XP_002322619.1| predicted protein [Populus trichocarpa] gi|222867249|gb|EEF04380.1|
           predicted protein [Populus trichocarpa]
          Length = 472

 Score = 88.2 bits (217), Expect(2) = 8e-17
 Identities = 42/92 (45%), Positives = 64/92 (69%), Gaps = 7/92 (7%)
 Frame = -2

Query: 256 NLKENRWASRILLPLY-------KIGTISKICDPNPCVEVCFGCY*SLGKVGKVEEAEAV 98
           NL+E+RWA + +LPLY       ++  + K C  +P ++ C     + G++ K+ EAEAV
Sbjct: 239 NLEEHRWACQFMLPLYGTLGKADEVSRLWKFCKKSPRLDECMAAIEAWGQLKKIPEAEAV 298

Query: 97  FDRMTQTWKKLSSRNYNTLLKVYANHKMPTKG 2
           F+ M++TWKKLSS++Y+ LLKVYAN+KM +KG
Sbjct: 299 FELMSKTWKKLSSKHYSALLKVYANNKMLSKG 330



 Score = 23.5 bits (49), Expect(2) = 8e-17
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 341 TQGLFVRHYVTGG 303
           TQ +  RHYV+GG
Sbjct: 211 TQAIMARHYVSGG 223


>gb|ADN33879.1| DNA-binding protein [Cucumis melo subsp. melo]
          Length = 608

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 43/110 (39%), Positives = 68/110 (61%), Gaps = 7/110 (6%)
 Frame = -2

Query: 310 LGAIHSESKGSI*VDGRCNLKENRWASRILLPLY-------KIGTISKICDPNPCVEVCF 152
           LG +  ++   +      N K +RW  R LLPLY       ++  + +IC+PNP VE C 
Sbjct: 357 LGGLKDKAMPILKATEEVNSKGSRWPCRYLLPLYGELQMEDEVRRLWEICEPNPNVEECM 416

Query: 151 GCY*SLGKVGKVEEAEAVFDRMTQTWKKLSSRNYNTLLKVYANHKMPTKG 2
               + GK+  ++EAE +FDR+ +TWK+LS+++Y+T++KVY + KM TKG
Sbjct: 417 AAIVAWGKLKNIQEAEKIFDRVVKTWKRLSTKHYSTMIKVYGDSKMLTKG 466


>emb|CBI30135.3| unnamed protein product [Vitis vinifera]
          Length = 624

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 45/92 (48%), Positives = 63/92 (68%), Gaps = 7/92 (7%)
 Frame = -2

Query: 256 NLKENRWASRILLPLYK-------IGTISKICDPNPCVEVCFGCY*SLGKVGKVEEAEAV 98
           NLKENRW  R+LLP Y        +  I K+C+ NP +        + GK+ KVEEAEA+
Sbjct: 391 NLKENRWVCRVLLPPYAALGKADDVERIWKVCESNPRLPEFVAAIEAYGKLKKVEEAEAI 450

Query: 97  FDRMTQTWKKLSSRNYNTLLKVYANHKMPTKG 2
           F++M++T+K+LSS++Y+ LLKVYA+HKM  KG
Sbjct: 451 FNKMSKTFKRLSSKHYSALLKVYADHKMLIKG 482