BLASTX nr result
ID: Coptis25_contig00018758
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00018758
(1892 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptas... 213 1e-52
ref|XP_002440822.1| hypothetical protein SORBIDRAFT_09g007400 [S... 209 2e-51
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas] 205 3e-50
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas] 204 5e-50
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas] 199 2e-48
>gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
truncatula]
Length = 642
Score = 213 bits (542), Expect = 1e-52
Identities = 104/282 (36%), Positives = 164/282 (58%)
Frame = +1
Query: 4 IMRSAFISVMFNGGPIGFFSMGRGLKQGDPLSPLLFAIAEDALSRGFHYLRTLHLVKPMV 183
I+ S+ + + NG GFF+ RG++QGDPLSPLLF I E+ LSR L L+ +
Sbjct: 356 ILHSSKMFISMNGAQHGFFNCNRGVRQGDPLSPLLFCIVEEVLSRSISILADKGLIDLIA 415
Query: 184 TFKDFQAPSHLLFADDIIIFVNGDLRGLKHINNLLGRYQLASGQCLNKDKSKIFMSGFRQ 363
++ P H + DD+++F + L + +L RY SGQ +N KS IF G
Sbjct: 416 ASRNNCLPFHCFYVDDLMVFCKAKMSSLIVLKSLFTRYADCSGQIMNIRKSFIFAGGITD 475
Query: 364 LQKERIIQLLSIPEGFLPEKYLGVSMVQGKITRQTVTPVLDKIKKKLTCWKGRNLSFQGR 543
+ I+ +L G LP YLG + +GK P+ DK+K KL WK LS GR
Sbjct: 476 TRMNNIVNILGFNVGSLPFTYLGAPIFKGKPKGIHFQPIADKVKAKLAKWKASLLSIAGR 535
Query: 544 NILIKSVLCSIPIYNMAVYKWPSSIIKEAEKIIRNFLWTGDPSKRRITTVSWEKTCKPVQ 723
L+KSV+ S+ ++ M++Y WP I+KE EK I+NF+W+GD +KR++ TV+W K C +
Sbjct: 536 IQLVKSVVQSMLVHTMSIYSWPIKILKEMEKWIKNFIWSGDVTKRKMVTVAWRKICADYE 595
Query: 724 EGGIGIKQLREINLSMQMKLAWSILNGTDDFSMLMRSKYTGR 849
EGG+G+K L +N + +K+ W+++ + ++ ++R+ + G+
Sbjct: 596 EGGLGVKSLICLNEATNLKICWNLMQSDEQWANIIRNSWCGQ 637
>ref|XP_002440822.1| hypothetical protein SORBIDRAFT_09g007400 [Sorghum bicolor]
gi|241946107|gb|EES19252.1| hypothetical protein
SORBIDRAFT_09g007400 [Sorghum bicolor]
Length = 835
Score = 209 bits (532), Expect = 2e-51
Identities = 149/556 (26%), Positives = 244/556 (43%), Gaps = 14/556 (2%)
Frame = +1
Query: 4 IMRSAFISVMFNGGPIGFFSMGRGLKQGDPLSPLLFAIAEDALSRGFHYLRTLHLVKPMV 183
++ +SV N + +G++QGDPLSP+LF D LSR ++ HL +
Sbjct: 231 VVSGGTVSVKLNNLIGPYIKSHKGVRQGDPLSPILFNFVADGLSRMILKAQSNHLFCGLG 290
Query: 184 TFKDFQAPSHLLFADDIIIFVNGDLRGLKHINNLLGRYQLASGQCLNKDKSKIFMSGFRQ 363
Q + L + DD II + DL G +++ LL Y+L +G +N KS++
Sbjct: 291 DHIIEQGIAVLQYTDDTIICLKHDLVGARNMKLLLYIYELMAGLKINFSKSEVITINDED 350
Query: 364 LQKERIIQLLSIPEGFLPEKYLGVSMVQGKITRQTVTPVLDKIKKKLTCWKGRNLSFQGR 543
+ + + + G P KYLGV + ++ +P++DK KKL WKG N+S GR
Sbjct: 351 NWDRKYVDIFNCQVGTFPIKYLGVPVSPSRLHVSDWSPLIDKSMKKLDIWKGGNMSIAGR 410
Query: 544 NILIKSVLCSIPIYNMAVYKWPSSIIKEAEKIIRNFLWTGDPSKRRITTVSWEKTCKPVQ 723
+ LI S L + PIY+M++Y P S+I +KI RNF W G +K++ + W K C+ +
Sbjct: 411 STLISSSLNNAPIYHMSIYLLPKSVIGRLDKIRRNFFWQGGSTKQKYHLIKWTKICRSKK 470
Query: 724 EGGIGIKQLREINLSMQMKLAWSILNGTDDFSMLMRSKYTGRNG--RFIHYSKPSSIWA- 894
+GGIGIK +R++N+S+ +K W + N D + +++ KY N H S+IWA
Sbjct: 471 KGGIGIKDIRKMNVSLLIKWWWKLDNEDDVWQKIIKHKYLKSNSILDVSHKQSDSAIWAD 530
Query: 895 ----------GIKEALYE-VTTRSQXXXXXXXXXXXXXXXXLGDFXXXXXXXXXXXXIAG 1041
G K+ + + TT L F
Sbjct: 531 LLKVKDIYLQGRKKVVRDGKTTFFWKDTWLYEKPLCILYPVLFKFCQQQNILVDQVKDNH 590
Query: 1042 HNSKLSSMVTENVITIPRSLSRILEHLGVSPRSPIICSPQDKDYRIWCPDVKGKFSTKSA 1221
N + + +N+++ + + + + +P D D +W + FS KS
Sbjct: 591 QNISFTRCLVDNLLSGWQKILSDMRKVNFTP---------DHDSVVWKVAIARLFSVKSV 641
Query: 1222 FESIRRTRPKVSWYKNIWNNFIHPRTAATGWKLLHGCAATDDRIQKSGIRLVSACRLCKA 1401
+ ++ S + IW + I + W LL+ T D + K C C
Sbjct: 642 YNAMTSDESGPS-HSKIWKSKIPAKIKIFLWLLLNNVILTKDNLIKRKWIGDPTCYFCD- 699
Query: 1402 ADETLNHLLWECSLSIQLWVWLASCFLIQQPILGFKNAMILSKTWSPMMKQIWNSGVVAG 1581
DE+++HL + CS + +W +A C + W P KQ G+ A
Sbjct: 700 QDESVSHLFFHCSTAKAVWAIVAHCIGANNIPNTLNQCWTWCECWLPAGKQFHTLGIAAI 759
Query: 1582 MVSVWNMRNKVYFENK 1629
++W RNK FE +
Sbjct: 760 CWAIWKTRNKCCFEGR 775
>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 205 bits (522), Expect = 3e-50
Identities = 157/646 (24%), Positives = 275/646 (42%), Gaps = 34/646 (5%)
Frame = +1
Query: 7 MRSAFISVMFNGGPIGFFSMGRGLKQGDPLSPLLFAIAEDALSRGFHYLRTLHLVKPMVT 186
++ + +++++NGG + F GRGL+QGDPL+P LF + + L+ KP+
Sbjct: 614 LQESSLAILWNGGRLPPFKPGRGLRQGDPLAPYLFNLVMERLAHDIQTRVNARTWKPVHI 673
Query: 187 FKDFQAPSHLLFADDIIIFVNGDLRGLKHINNLLGRYQLASGQCLNKDKSKIFMSGFRQL 366
+ SHL FADD+++F + + + L + ASG +N KS +F S
Sbjct: 674 TRGGTGISHLFFADDLMLFGEASEHQAQIMFDCLDSFSNASGLKVNFSKSLLFCSSNVNA 733
Query: 367 QKERII-QLLSIPEGFLPEKYLGVSMVQGKITRQTVTPVLDKIKKKLTCWKGRNLSFQGR 543
+R I +L +P YLG+ M++ +++R T V+DK++ KL+ WK +L+ GR
Sbjct: 734 GLKRAIGSILQVPVAESLGTYLGIPMLKERVSRNTFNAVIDKMRTKLSSWKASSLNMAGR 793
Query: 544 NILIKSVLCSIPIYNMAVYKWPSSIIKEAEKIIRNFLWTGDPSKRRITTVSWEKTCKPVQ 723
+L+++ L ++P Y M V P S E +K RNFLW D + R++ +V+W + CKP
Sbjct: 794 RVLVQASLATVPTYTMQVMALPVSTCNEIDKTCRNFLWGHDTNTRKLHSVNWAEICKPRN 853
Query: 724 EGGIGIKQLREINLSMQMKLAWSILNGTDD-FSMLMRSKYTGRNGRFIHYSKPSSI---W 891
EGG+G++ R+ N + K+AW I + D + ++R KY +N F+H S+ W
Sbjct: 854 EGGLGLRMARDFNRAFLTKMAWQIFSNIDKLWVKVLREKYV-KNADFLHLQSQSNCSWGW 912
Query: 892 AGIKEALYEVTTRSQXXXXXXXXXXXXXXXXLGDFXXXXXXXXXXXXIAGHNSKLSSMVT 1071
I + + + +GD + ++ +
Sbjct: 913 RSIMKGKDVLAGAIKWNVGNGRKINFWNDWWVGDGPLASNTDCI------NQPHMTDIKV 966
Query: 1072 ENVITIPR-----SLSRIL--EHLGVSPRSPIICSPQDKDYRIWCPDVKGKFSTKSAFES 1230
E++IT R +L IL + + +PI + + +D+ W G + SA+
Sbjct: 967 EDLITSQRRWDTGALHNILPTNMIDMVRATPIAINSEQEDFLSWPHSTTGMVTVSSAYSL 1026
Query: 1231 IRRTRPKVSWYKNIWNNFIHPRTAATGWKLLHGCAATDDRIQKSGIRLVSACRLCKAADE 1410
I + IW + WK++ + ++ G+ ++C +C DE
Sbjct: 1027 IAGHDGDDRSHDWIWRATCTEKIKLFMWKIVKNGLMVNVERKRRGLADAASCPVCGEEDE 1086
Query: 1411 TLNHLLWECSLSIQLW------------------VWLASCFLIQQPILGFKNAMILSKTW 1536
TL+HL C L+ W W+ + QQ K+ S W
Sbjct: 1087 TLDHLFRRCLLAEACWDSAVPPLTFQTSNHLHMHSWMKAACSSQQ-----KDG--YSTNW 1139
Query: 1537 SPMMKQI-WNSGVVAGMVSVWNMRNKVYFENKM---PNLMDCKMFVRAQIACTIHRSKAC 1704
S + I WN +W RN++ F+N + ++++ ++ C + +
Sbjct: 1140 SLIFPYILWN---------LWKARNRLVFDNNITAPSDILNRSFMESSEARCLLAKRTGL 1190
Query: 1705 NGSNGWEAQVLKNWEITPRPKQAPQMKTCFWIPPEPNIVKLNIDGA 1842
+ W + W PP KLN DGA
Sbjct: 1191 Q-------TAFQTWVV--------------WSPPAAGFTKLNSDGA 1215
>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 204 bits (520), Expect = 5e-50
Identities = 157/647 (24%), Positives = 275/647 (42%), Gaps = 35/647 (5%)
Frame = +1
Query: 7 MRSAFISVMFNGGPIGFFSMGRGLKQGDPLSPLLFAIAEDALSRGFHYLRTLHLVKPMVT 186
++ + +++++NGG + F GRGL+QGDPL+P LF + + L+ KP+
Sbjct: 614 LQESSLAILWNGGRLPPFKPGRGLRQGDPLAPYLFNLVMERLAHDIQTRVNARTWKPVHI 673
Query: 187 FKDFQAPSHLLFADDIIIFVNGDLRGLKHINNLLGRYQLASGQCLNKDKSKIFMSGFRQL 366
+ SHL FADD+++F + + + L + ASG +N KS +F S
Sbjct: 674 TRGGTGISHLFFADDLMLFGEASEHQAQIMFDCLDSFSNASGLKVNFSKSLLFCSSNVNA 733
Query: 367 QKERII-QLLSIPEGFLPEKYLGVSMVQGKITRQTVTPVLDKIKKKLTCWKGRNLSFQGR 543
+R I +L +P YLG+ M++ +++R T V+DK++ KL+ WK +L+ GR
Sbjct: 734 GLKRAIGSILQVPVAESLGTYLGIPMLKERVSRNTFNAVIDKMRTKLSSWKASSLNMAGR 793
Query: 544 NILIKSVLCSIPIYNMAVYKWPSSIIKEAEKIIRNFLWTGDPSKRRITTVSWEKTCKPVQ 723
+L+++ L ++P Y M V P S E +K RNFLW D + R++ +V+W + CKP
Sbjct: 794 RVLVQASLATVPTYTMQVMALPVSTCNEIDKTCRNFLWGHDTNTRKLHSVNWAEICKPRN 853
Query: 724 EGGIGIKQLREINLSMQMKLAWSILNGTDD-FSMLMRSKYTGRNGRFIHYSKPSSI---W 891
EGG+G++ R+ N + K+AW I + D + ++R KY +N F+H S+ W
Sbjct: 854 EGGLGLRMARDFNRAFLTKMAWQIFSNIDKLWVKVLREKYV-KNADFLHLQSQSNCSWGW 912
Query: 892 AGIKEALYEVTTRSQXXXXXXXXXXXXXXXXLGDFXXXXXXXXXXXXIAGHNSKLSSMVT 1071
I + + + +GD + ++ +
Sbjct: 913 RSIMKGKDVLAGAIKWNVGNGRKINFWNDWWVGDGPLASNTDCI------NQPHMTDIKV 966
Query: 1072 ENVITIPR-----SLSRIL--EHLGVSPRSPIICSPQDKDYRIWCPDVKGKFSTKSAFES 1230
E++IT R +L IL + + +PI + + +D+ W G + SA+
Sbjct: 967 EDLITSQRRWDTGALHNILPTNMIDMVRATPIAINSEQEDFLSWPHSTTGMVTVSSAYSL 1026
Query: 1231 IRRTRPKVSWYKNIWNNFIHPRTAATGWKLLHGCAATDDRIQKSGIRLVSACRLCKAADE 1410
I + IW + WK++ + ++ G+ ++C +C DE
Sbjct: 1027 IAGHDGDDRSHDWIWRATCTEKIKLFMWKIVKNGLMVNVERKRRGLADAASCPVCGEEDE 1086
Query: 1411 TLNHLLWECSLSIQLW------------------VWL-ASCFLIQQPILGFKNAMILSKT 1533
TL+HL C L+ W W+ A+C Q+ G
Sbjct: 1087 TLDHLFRRCLLAEACWDSAVPPLTFQTSNHLHMHSWMKAACSSQQKDGYG--------TN 1138
Query: 1534 WSPMMKQI-WNSGVVAGMVSVWNMRNKVYFENKM---PNLMDCKMFVRAQIACTIHRSKA 1701
WS + I WN +W RN++ F+N + ++++ ++ C + +
Sbjct: 1139 WSLIFPYILWN---------LWKARNRLVFDNNITAPSDILNRSFMESSEARCLLAKRTG 1189
Query: 1702 CNGSNGWEAQVLKNWEITPRPKQAPQMKTCFWIPPEPNIVKLNIDGA 1842
+ W + W PP KLN DGA
Sbjct: 1190 LQ-------TAFQTWVV--------------WSPPAAGFTKLNSDGA 1215
>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
Length = 1898
Score = 199 bits (506), Expect = 2e-48
Identities = 156/647 (24%), Positives = 272/647 (42%), Gaps = 35/647 (5%)
Frame = +1
Query: 7 MRSAFISVMFNGGPIGFFSMGRGLKQGDPLSPLLFAIAEDALSRGFHYLRTLHLVKPMVT 186
++ + +++++NGG F GRGL+QGDPL P LF + + L+ KP+
Sbjct: 1146 LQESSLAILWNGGRPPPFKPGRGLRQGDPLVPYLFNLVMERLAHDIQTRVNARTWKPVHI 1205
Query: 187 FKDFQAPSHLLFADDIIIFVNGDLRGLKHINNLLGRYQLASGQCLNKDKSKIFMSGFRQL 366
+ SHL FADD+++F + + + L + ASG +N KS +F S
Sbjct: 1206 TRGGTGISHLFFADDLMLFGEASEHQAQIMFDCLDSFSDASGLKVNFSKSLLFCSSNVNA 1265
Query: 367 QKERII-QLLSIPEGFLPEKYLGVSMVQGKITRQTVTPVLDKIKKKLTCWKGRNLSFQGR 543
+R I +L +P YLG+ M++ +++R T V+DK++ KL+ WK +L+ GR
Sbjct: 1266 GLKRAIGSILQVPVAESLGTYLGIPMLKERVSRNTFNAVIDKMRTKLSSWKASSLNMAGR 1325
Query: 544 NILIKSVLCSIPIYNMAVYKWPSSIIKEAEKIIRNFLWTGDPSKRRITTVSWEKTCKPVQ 723
+L+++ L ++P Y M V P S E +K RNFLW D + R++ +V+W + CKP
Sbjct: 1326 RVLVQASLATVPTYTMQVMALPVSTCNEIDKTCRNFLWGHDTNTRKLHSVNWAEICKPRN 1385
Query: 724 EGGIGIKQLREINLSMQMKLAWSILNGTDD-FSMLMRSKYTGRNGRFIHYSKPSSI---W 891
EGG+G++ R+ N + K+AW I + D + ++R KY +N F+H S+ W
Sbjct: 1386 EGGLGLRMARDFNRAFLTKMAWQIFSNIDKLWVKVLREKYV-KNADFLHLQSQSNCSWGW 1444
Query: 892 AGIKEALYEVTTRSQXXXXXXXXXXXXXXXXLGDFXXXXXXXXXXXXIAGHNSKLSSMVT 1071
I + + + +GD + ++ +
Sbjct: 1445 RSIMKGKDVLAGAIKWNVGNGRKINFWNDWWVGDGPLASNTDCI------NQPHMTDIKV 1498
Query: 1072 ENVITIPR-----SLSRIL--EHLGVSPRSPIICSPQDKDYRIWCPDVKGKFSTKSAFES 1230
E++ T R +L IL + + +PI + + +D+ W G + SA+
Sbjct: 1499 EDLTTSQRRWDTGALHNILPINMIDMVRATPIAINSEQEDFPSWPHSTTGMVTVSSAYSL 1558
Query: 1231 IRRTRPKVSWYKNIWNNFIHPRTAATGWKLLHGCAATDDRIQKSGIRLVSACRLCKAADE 1410
I + IW + WK++ + ++ G+ ++C +C DE
Sbjct: 1559 IAGHDGDGRSHDWIWRATCTEKIKLFMWKIVKNGLMVNVERKRRGLADAASCPVCGEEDE 1618
Query: 1411 TLNHLLWECSLSIQLW------------------VWL-ASCFLIQQPILGFKNAMILSKT 1533
TL+HL C L+ W W+ A+C Q+ G
Sbjct: 1619 TLDHLFRRCLLAEACWDSAVPPLTFQTSNHLHMHSWMKAACSSQQKDGYG--------TN 1670
Query: 1534 WSPMMKQI-WNSGVVAGMVSVWNMRNKVYFENKM---PNLMDCKMFVRAQIACTIHRSKA 1701
WS + I WN +W RN++ F+N + ++++ ++ C + +
Sbjct: 1671 WSLIFPYILWN---------LWKARNRLVFDNNITAPSDILNRSFMESSEARCLLAKRTG 1721
Query: 1702 CNGSNGWEAQVLKNWEITPRPKQAPQMKTCFWIPPEPNIVKLNIDGA 1842
+ W + W PP KLN DGA
Sbjct: 1722 LQ-------TAFQTWVV--------------WSPPAAGFTKLNSDGA 1747