BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018748
         (758 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulga...   251   1e-64
emb|CAB75484.1| putative protein [Arabidopsis thaliana]               247   2e-63
gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam...   244   2e-62
emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|72677...   244   2e-62
gb|AAD24831.1| putative non-LTR retroelement reverse transcripta...   243   3e-62

>emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1389

 Score =  251 bits (641), Expect = 1e-64
 Identities = 127/254 (50%), Positives = 161/254 (63%), Gaps = 2/254 (0%)
 Frame = +2

Query: 2    IHAAVFDMGPYKSPGPDGFTPLFFQKCWHFVKDDLYRMVSQFFQTGHFLRQLNHTHITLV 181
            I  AVFD+ P KSPGPDGF P FFQK W  +   + R V  FF +G+ L+++NHT + L+
Sbjct: 449  IKNAVFDLAPDKSPGPDGFPPYFFQKYWTLIGKSVCRAVQAFFHSGYMLKEVNHTFLALI 508

Query: 182  PKSPHPSSIKDYRPISLCNTAYRIISKILVNRLKPLLDKIILPHQNAFVKRRQISDNSIM 361
            PK   P +   +RPISLC+T Y++ISKI+ NRLK  L KII P Q AF+  R I DN ++
Sbjct: 509  PKVDKPVNANHFRPISLCSTIYKVISKIITNRLKITLGKIIHPLQGAFIPERLIQDNILI 568

Query: 362  VHEILHYFKKKKGISGCCAAKLDMNKAFDRIEWNFVITSLRSLGFCQTWCDWIYSCISST 541
             HE+ H FK K G  G  A KLDM KA+DR+EW ++ T++  +GF   W +WI SCISS 
Sbjct: 569  AHEVFHSFKNKTGRGGWIAIKLDMEKAYDRLEWKYIYTTMDKMGFSPIWIEWIRSCISSA 628

Query: 542  SFSVKVNGSPHGFFKPSRGLRQGDPLSPALFIICTXXXXXXXXXXXXK--KFIHGVKVGR 715
            SFSV VNG P   F PSRG+RQGDPLSP LFI+C             +  K I GV +GR
Sbjct: 629  SFSVLVNGIPGERFFPSRGIRQGDPLSPYLFILCAELLAREFSKACHEPGKLI-GVPIGR 687

Query: 716  KCPPVSHL*FADDS 757
                +  L FADD+
Sbjct: 688  TRTRIPFLTFADDT 701


>emb|CAB75484.1| putative protein [Arabidopsis thaliana]
          Length = 851

 Score =  247 bits (630), Expect = 2e-63
 Identities = 113/253 (44%), Positives = 164/253 (64%), Gaps = 1/253 (0%)
 Frame = +2

Query: 2   IHAAVFDMGPYKSPGPDGFTPLFFQKCWHFVKDDLYRMVSQFFQTGHFLRQLNHTHITLV 181
           I  A+  +G  K+PGPDG T  F+++CW  V +D+ + V  FF++ H    +NHT+I ++
Sbjct: 54  IFEAICQIGDDKAPGPDGLTARFYKQCWDIVGNDVIKEVKLFFESSHMKTSVNHTNICMI 113

Query: 182 PKSPHPSSIKDYRPISLCNTAYRIISKILVNRLKPLLDKIILPHQNAFVKRRQISDNSIM 361
           PK  +P ++ DYRPI+LCN  Y++ISK +VNRLK  L+ I+   Q AF+  R I+DN ++
Sbjct: 114 PKIQNPQTLSDYRPIALCNVLYKVISKCMVNRLKAHLNSIVSDSQAAFIPGRIINDNVMI 173

Query: 362 VHEILHYFKKKKGISGC-CAAKLDMNKAFDRIEWNFVITSLRSLGFCQTWCDWIYSCISS 538
            HEI+H  K +K +S    A K D++KA+DR+EW+F+ T++R  GFC  W  WI + + S
Sbjct: 174 AHEIMHSLKVRKRVSKTYMAVKTDVSKAYDRVEWDFLETTMRLFGFCDKWIGWIMAAVKS 233

Query: 539 TSFSVKVNGSPHGFFKPSRGLRQGDPLSPALFIICTXXXXXXXXXXXXKKFIHGVKVGRK 718
             +SV +NGSPHG+  P+RG+RQGDPLSP LFI+C                I GV++G  
Sbjct: 234 VHYSVLINGSPHGYISPTRGIRQGDPLSPYLFILCGDILSHLIKVKASSGDIRGVRIGNG 293

Query: 719 CPPVSHL*FADDS 757
            P ++HL FADDS
Sbjct: 294 APAITHLQFADDS 306


>gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam: rvt.hmm, score:
            42.57) [Arabidopsis thaliana]
          Length = 1662

 Score =  244 bits (622), Expect = 2e-62
 Identities = 114/253 (45%), Positives = 163/253 (64%), Gaps = 1/253 (0%)
 Frame = +2

Query: 2    IHAAVFDMGPYKSPGPDGFTPLFFQKCWHFVKDDLYRMVSQFFQTGHFLRQLNHTHITLV 181
            I+ A+  +G  K+PGPDG T  F++ CW  V  D+ + V  FF+T +  + +NHT+I ++
Sbjct: 815  IYNAICHIGDDKAPGPDGLTARFYKSCWEIVGPDVIKEVKIFFRTSYMKQSINHTNICMI 874

Query: 182  PKSPHPSSIKDYRPISLCNTAYRIISKILVNRLKPLLDKIILPHQNAFVKRRQISDNSIM 361
            PK  +P ++ DYRPI+LCN  Y+IISK LV RLK  LD I+   Q AF+  R ++DN ++
Sbjct: 875  PKITNPETLSDYRPIALCNVLYKIISKCLVERLKGHLDAIVSDSQAAFIPGRLVNDNVMI 934

Query: 362  VHEILHYFKKKKGIS-GCCAAKLDMNKAFDRIEWNFVITSLRSLGFCQTWCDWIYSCISS 538
             HE++H  K +K +S    A K D++KA+DR+EWNF+ T++R  GF +TW  WI   + S
Sbjct: 935  AHEMMHSLKTRKRVSQSYMAVKTDVSKAYDRVEWNFLETTMRLFGFSETWIKWIMGAVKS 994

Query: 539  TSFSVKVNGSPHGFFKPSRGLRQGDPLSPALFIICTXXXXXXXXXXXXKKFIHGVKVGRK 718
             ++SV VNG PHG  +P RG+RQGDPLSP LFI+C             +  I G+++G  
Sbjct: 995  VNYSVLVNGIPHGTIQPQRGIRQGDPLSPYLFILCADILNHLIKNRVAEGDIRGIRIGNG 1054

Query: 719  CPPVSHL*FADDS 757
             P V+HL FADDS
Sbjct: 1055 VPGVTHLQFADDS 1067


>emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|7267781|emb|CAB81184.1|
            putative protein [Arabidopsis thaliana]
          Length = 1294

 Score =  244 bits (622), Expect = 2e-62
 Identities = 114/253 (45%), Positives = 163/253 (64%), Gaps = 1/253 (0%)
 Frame = +2

Query: 2    IHAAVFDMGPYKSPGPDGFTPLFFQKCWHFVKDDLYRMVSQFFQTGHFLRQLNHTHITLV 181
            I+ A+  +G  K+PGPDG T  F++ CW  V  D+ + V  FF+T +  + +NHT+I ++
Sbjct: 795  IYNAICHIGDDKAPGPDGLTARFYKSCWEIVGPDVIKEVKIFFRTSYMKQSINHTNICMI 854

Query: 182  PKSPHPSSIKDYRPISLCNTAYRIISKILVNRLKPLLDKIILPHQNAFVKRRQISDNSIM 361
            PK  +P ++ DYRPI+LCN  Y+IISK LV RLK  LD I+   Q AF+  R ++DN ++
Sbjct: 855  PKITNPETLSDYRPIALCNVLYKIISKCLVERLKGHLDAIVSDSQAAFIPGRLVNDNVMI 914

Query: 362  VHEILHYFKKKKGIS-GCCAAKLDMNKAFDRIEWNFVITSLRSLGFCQTWCDWIYSCISS 538
             HE++H  K +K +S    A K D++KA+DR+EWNF+ T++R  GF +TW  WI   + S
Sbjct: 915  AHEMMHSLKTRKRVSQSYMAVKTDVSKAYDRVEWNFLETTMRLFGFSETWIKWIMGAVKS 974

Query: 539  TSFSVKVNGSPHGFFKPSRGLRQGDPLSPALFIICTXXXXXXXXXXXXKKFIHGVKVGRK 718
             ++SV VNG PHG  +P RG+RQGDPLSP LFI+C             +  I G+++G  
Sbjct: 975  VNYSVLVNGIPHGTIQPQRGIRQGDPLSPYLFILCADILNHLIKNRVAEGDIRGIRIGNG 1034

Query: 719  CPPVSHL*FADDS 757
             P V+HL FADDS
Sbjct: 1035 VPGVTHLQFADDS 1047


>gb|AAD24831.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1524

 Score =  243 bits (620), Expect = 3e-62
 Identities = 112/253 (44%), Positives = 163/253 (64%), Gaps = 1/253 (0%)
 Frame = +2

Query: 2    IHAAVFDMGPYKSPGPDGFTPLFFQKCWHFVKDDLYRMVSQFFQTGHFLRQLNHTHITLV 181
            I+ A+  +G  K+PGPDG T  F++ CW  V  D+   V +FF+T      +NHT+I ++
Sbjct: 589  IYDAICQIGDDKAPGPDGLTARFYKNCWDIVGYDVILEVKKFFETSFMKPSINHTNICMI 648

Query: 182  PKSPHPSSIKDYRPISLCNTAYRIISKILVNRLKPLLDKIILPHQNAFVKRRQISDNSIM 361
            PK  +P+++ DYRPI+LCN  Y++ISK LVNRLK  L+ I+   Q AF+  R I+DN ++
Sbjct: 649  PKITNPTTLSDYRPIALCNVLYKVISKCLVNRLKSHLNSIVSDSQAAFIPGRIINDNVMI 708

Query: 362  VHEILHYFKKKKGISGC-CAAKLDMNKAFDRIEWNFVITSLRSLGFCQTWCDWIYSCISS 538
             HE++H  K +K +S    A K D++KA+DR+EW+F+ T++R  GFC  W  WI + + S
Sbjct: 709  AHEVMHSLKVRKRVSKTYMAVKTDVSKAYDRVEWDFLETTMRLFGFCNKWIGWIMAAVKS 768

Query: 539  TSFSVKVNGSPHGFFKPSRGLRQGDPLSPALFIICTXXXXXXXXXXXXKKFIHGVKVGRK 718
              +SV +NGSPHG+  P+RG+RQGDPLSP LFI+C                + GV++G  
Sbjct: 769  VHYSVLINGSPHGYITPTRGIRQGDPLSPYLFILCGDILSHLINGRASSGDLRGVRIGNG 828

Query: 719  CPPVSHL*FADDS 757
             P ++HL FADDS
Sbjct: 829  APAITHLQFADDS 841