BLASTX nr result

ID: Coptis25_contig00018738 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018738
         (697 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68902.1| hypothetical protein VITISV_031323 [Vitis vinifera]    44   3e-07
ref|XP_002271965.2| PREDICTED: uncharacterized protein LOC100249...    44   6e-07
emb|CAN61978.1| hypothetical protein VITISV_038568 [Vitis vinifera]    42   1e-06
emb|CAN68220.1| hypothetical protein VITISV_005372 [Vitis vinifera]    47   1e-06
emb|CAN68112.1| hypothetical protein VITISV_040983 [Vitis vinifera]    45   2e-06

>emb|CAN68902.1| hypothetical protein VITISV_031323 [Vitis vinifera]
          Length = 1206

 Score = 43.9 bits (102), Expect(2) = 3e-07
 Identities = 26/72 (36%), Positives = 36/72 (50%)
 Frame = -1

Query: 694 VNQMYSVKQSRNLGTQLRSFPCGVVWKVPILLKVKFFFWGAIHGRTLIADALIQRETIVA 515
           V  +YS+  SR  G Q   FP  ++W   +  KV FF W A  G+ L  D L +R   +A
Sbjct: 425 VKSLYSILDSRK-GVQ---FPINIIWNPCVPTKVCFFAWEAFWGKVLTLDQLKKRGRCLA 480

Query: 514 PTCAMCNLLEEN 479
             C +C   EE+
Sbjct: 481 NRCFLCCEEEES 492



 Score = 36.6 bits (83), Expect(2) = 3e-07
 Identities = 22/75 (29%), Positives = 30/75 (40%)
 Frame = -3

Query: 395 SVEDLLSRWPRRRGNNFGAILWWLLPYAVMWVLWKMRNNLIFKHKTPSMTKTILEVKGLL 216
           SV D LS W           +W   P  + W +WK RN + F ++  SM +        L
Sbjct: 523 SVRDTLSGWSDFNMGKKRRKVWKAAPLCIFWAVWKERNRIAFDNEELSMNRLKNSFVCNL 582

Query: 215 WTGCHHL*IEGNIIL 171
           W     +  EG  IL
Sbjct: 583 WVWIKSVVNEGKGIL 597


>ref|XP_002271965.2| PREDICTED: uncharacterized protein LOC100249130 [Vitis vinifera]
          Length = 2143

 Score = 43.9 bits (102), Expect(2) = 6e-07
 Identities = 26/72 (36%), Positives = 36/72 (50%)
 Frame = -1

Query: 694  VNQMYSVKQSRNLGTQLRSFPCGVVWKVPILLKVKFFFWGAIHGRTLIADALIQRETIVA 515
            V  +YS+  SR  G Q   FP  ++W   +  KV FF W A  G+ L  D L +R   +A
Sbjct: 1778 VKSLYSILDSRR-GVQ---FPINIIWNPCVPTKVCFFAWEAFGGKVLTLDQLKKRGRCLA 1833

Query: 514  PTCAMCNLLEEN 479
              C +C   EE+
Sbjct: 1834 NRCFLCCEEEES 1845



 Score = 35.4 bits (80), Expect(2) = 6e-07
 Identities = 17/53 (32%), Positives = 23/53 (43%)
 Frame = -3

Query: 395  SVEDLLSRWPRRRGNNFGAILWWLLPYAVMWVLWKMRNNLIFKHKTPSMTKTI 237
            SV D LS W           +W   P  + W +WK RN + F ++  SM   I
Sbjct: 1876 SVRDTLSGWSGFNMGKKRRKVWKAAPSCIFWAVWKERNRIAFDNEELSMNSII 1928


>emb|CAN61978.1| hypothetical protein VITISV_038568 [Vitis vinifera]
          Length = 731

 Score = 41.6 bits (96), Expect(2) = 1e-06
 Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 2/92 (2%)
 Frame = -1

Query: 685 MYSVKQSRNLGTQLRSF--PCGVVWKVPILLKVKFFFWGAIHGRTLIADALIQRETIVAP 512
           ++SVK   N+    R    P  V+W   +  KV FF W A  G+ L  D L +R   +A 
Sbjct: 546 IFSVKSLYNILVSRRGVQSPINVIWNPCVPTKVCFFAWEAFWGKVLTLDQLKKRGRCLAN 605

Query: 511 TCAMCNLLEENTTYDAACASSFFCGVLCKWFF 416
            C +C   EE  + D      F   VL +  F
Sbjct: 606 RCFLC--CEEEESIDHILIQCFRARVLWELLF 635



 Score = 37.0 bits (84), Expect(2) = 1e-06
 Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
 Frame = -3

Query: 395 SVEDLLSRWPRRRGNNFGAI---LWWLLPYAVMWVLWKMRNNLIFKHKTPSMTK 243
           SV D LS W    G N G     +W + P  + WV+WK RN + F ++  SM +
Sbjct: 647 SVRDTLSGWC---GFNLGKKRRKVWKVAPLCIFWVVWKERNRIAFDNEELSMNR 697


>emb|CAN68220.1| hypothetical protein VITISV_005372 [Vitis vinifera]
          Length = 577

 Score = 46.6 bits (109), Expect(2) = 1e-06
 Identities = 22/54 (40%), Positives = 30/54 (55%)
 Frame = -1

Query: 640 SFPCGVVWKVPILLKVKFFFWGAIHGRTLIADALIQRETIVAPTCAMCNLLEEN 479
           SFP   +WKV +  +V FF W A  G+TL  D L +R   +A  C +C   EE+
Sbjct: 428 SFPSSAIWKVSVQPRVSFFGWEATWGKTLTLDQLQRRGWALANRCYLCQRHEES 481



 Score = 32.0 bits (71), Expect(2) = 1e-06
 Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 6/56 (10%)
 Frame = -3

Query: 392 VEDLLSRW------PRRRGNNFGAILWWLLPYAVMWVLWKMRNNLIFKHKTPSMTK 243
           V+++LS W       +R+G      +W   P  + W +WK RN + FK +  S+ +
Sbjct: 513 VKEMLSGWNGTFVGKKRKG------VWKASPLCLFWTVWKTRNKVAFKEEELSIQR 562


>emb|CAN68112.1| hypothetical protein VITISV_040983 [Vitis vinifera]
          Length = 939

 Score = 44.7 bits (104), Expect(2) = 2e-06
 Identities = 26/72 (36%), Positives = 37/72 (51%)
 Frame = -1

Query: 694 VNQMYSVKQSRNLGTQLRSFPCGVVWKVPILLKVKFFFWGAIHGRTLIADALIQRETIVA 515
           V  +YS+  SR+ G Q   FP  ++W   +  KV FF W A  G+ L  D L +R   +A
Sbjct: 757 VKSLYSILDSRS-GVQ---FPINIIWNPCVPTKVGFFAWEAFWGKVLTLDQLKKRGRCLA 812

Query: 514 PTCAMCNLLEEN 479
             C +C   EE+
Sbjct: 813 NRCFLCCEEEES 824



 Score = 33.1 bits (74), Expect(2) = 2e-06
 Identities = 15/49 (30%), Positives = 22/49 (44%)
 Frame = -3

Query: 395  SVEDLLSRWPRRRGNNFGAILWWLLPYAVMWVLWKMRNNLIFKHKTPSM 249
            SV D LS W           +W   P  + W +WK RN + F ++  S+
Sbjct: 855  SVRDTLSGWSGFNMGKKRRKVWKAAPSCIFWAVWKERNRIAFDNEELSL 903


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