BLASTX nr result

ID: Coptis25_contig00018737 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018737
         (220 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517962.1| Peroxisomal membrane protein, putative [Rici...   149   2e-34
ref|XP_002329364.1| predicted protein [Populus trichocarpa] gi|2...   149   3e-34
ref|XP_003562336.1| PREDICTED: uncharacterized protein LOC100846...   148   5e-34
ref|XP_004149288.1| PREDICTED: uncharacterized protein LOC101205...   147   7e-34
ref|NP_974505.1| Peroxisomal membrane 22 kDa (Mpv17/PMP22) famil...   145   3e-33

>ref|XP_002517962.1| Peroxisomal membrane protein, putative [Ricinus communis]
           gi|223542944|gb|EEF44480.1| Peroxisomal membrane
           protein, putative [Ricinus communis]
          Length = 344

 Score =  149 bits (376), Expect = 2e-34
 Identities = 64/73 (87%), Positives = 70/73 (95%)
 Frame = -2

Query: 219 KPLFDFDRTRMFRSGLVGFSLHGSLSHYYYQFCEALFPFQDWWVVPVKVAFDQTAWAALW 40
           KP+F+FDRTRMFRSGLVGF+LHGSLSHYYYQFCEALFPF+DWWVVP KVAFDQT WAA+W
Sbjct: 183 KPIFEFDRTRMFRSGLVGFTLHGSLSHYYYQFCEALFPFEDWWVVPAKVAFDQTVWAAIW 242

Query: 39  NSIYFVVLGLLRF 1
           NSIYF+VLG LRF
Sbjct: 243 NSIYFLVLGFLRF 255


>ref|XP_002329364.1| predicted protein [Populus trichocarpa] gi|222870414|gb|EEF07545.1|
           predicted protein [Populus trichocarpa]
          Length = 238

 Score =  149 bits (375), Expect = 3e-34
 Identities = 65/73 (89%), Positives = 69/73 (94%)
 Frame = -2

Query: 219 KPLFDFDRTRMFRSGLVGFSLHGSLSHYYYQFCEALFPFQDWWVVPVKVAFDQTAWAALW 40
           KP+F+FDRTR FRSGLVGFSLHGSLSHYYYQFCEALFPF+DWWVVP KVAFDQT WAALW
Sbjct: 84  KPIFEFDRTRTFRSGLVGFSLHGSLSHYYYQFCEALFPFEDWWVVPAKVAFDQTVWAALW 143

Query: 39  NSIYFVVLGLLRF 1
           NSIY+V LGLLRF
Sbjct: 144 NSIYYVALGLLRF 156


>ref|XP_003562336.1| PREDICTED: uncharacterized protein LOC100846887 [Brachypodium
           distachyon]
          Length = 359

 Score =  148 bits (373), Expect = 5e-34
 Identities = 64/73 (87%), Positives = 70/73 (95%)
 Frame = -2

Query: 219 KPLFDFDRTRMFRSGLVGFSLHGSLSHYYYQFCEALFPFQDWWVVPVKVAFDQTAWAALW 40
           KP+F+FDRTRMFRSGLVGF+LHGSLSHYYY FCE+LFPF+DWW VPVKVAFDQTAW+ALW
Sbjct: 205 KPIFEFDRTRMFRSGLVGFTLHGSLSHYYYHFCESLFPFKDWWAVPVKVAFDQTAWSALW 264

Query: 39  NSIYFVVLGLLRF 1
           NSIYFVVLG LRF
Sbjct: 265 NSIYFVVLGFLRF 277


>ref|XP_004149288.1| PREDICTED: uncharacterized protein LOC101205134 [Cucumis sativus]
           gi|449528619|ref|XP_004171301.1| PREDICTED:
           uncharacterized protein LOC101228605 [Cucumis sativus]
          Length = 376

 Score =  147 bits (372), Expect = 7e-34
 Identities = 65/72 (90%), Positives = 68/72 (94%)
 Frame = -2

Query: 219 KPLFDFDRTRMFRSGLVGFSLHGSLSHYYYQFCEALFPFQDWWVVPVKVAFDQTAWAALW 40
           KPLF+FDRTRMFRSGLVGFSLHGSLSHYYY FCE LFPFQDWWVVP KVAFDQTAW+A+W
Sbjct: 217 KPLFEFDRTRMFRSGLVGFSLHGSLSHYYYHFCEGLFPFQDWWVVPAKVAFDQTAWSAVW 276

Query: 39  NSIYFVVLGLLR 4
           NSIYFVVLG LR
Sbjct: 277 NSIYFVVLGFLR 288


>ref|NP_974505.1| Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein
           [Arabidopsis thaliana] gi|332656916|gb|AEE82316.1|
           Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein
           [Arabidopsis thaliana]
          Length = 361

 Score =  145 bits (367), Expect = 3e-33
 Identities = 63/73 (86%), Positives = 69/73 (94%)
 Frame = -2

Query: 219 KPLFDFDRTRMFRSGLVGFSLHGSLSHYYYQFCEALFPFQDWWVVPVKVAFDQTAWAALW 40
           KPLF+FDRTR+ RSGLVGF+LHGSLSHYYYQFCEALFPFQ+WWVVP KVAFDQT W+A+W
Sbjct: 164 KPLFEFDRTRVLRSGLVGFTLHGSLSHYYYQFCEALFPFQEWWVVPAKVAFDQTVWSAIW 223

Query: 39  NSIYFVVLGLLRF 1
           NSIYF VLGLLRF
Sbjct: 224 NSIYFTVLGLLRF 236


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