BLASTX nr result

ID: Coptis25_contig00018728 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018728
         (626 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003605480.1| AIG1-like protein, partial [Medicago truncat...    72   6e-11
ref|XP_002263827.2| PREDICTED: uncharacterized protein LOC100263...    69   5e-10
ref|XP_002280501.1| PREDICTED: uncharacterized protein LOC100254...    68   2e-09
ref|XP_003605486.1| hypothetical protein MTR_4g032190 [Medicago ...    67   3e-09
ref|XP_002525898.1| hypothetical protein RCOM_0540750 [Ricinus c...    63   4e-08

>ref|XP_003605480.1| AIG1-like protein, partial [Medicago truncatula]
           gi|355506535|gb|AES87677.1| AIG1-like protein, partial
           [Medicago truncatula]
          Length = 382

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 39/97 (40%), Positives = 57/97 (58%)
 Frame = -2

Query: 553 EKTTGRDRYNSNNKPSKRIRDSGQEYLNTSYSDTLESSIMDLEELVNKIKWLKRVHQYGF 374
           E+T    R N ++ P+K++R +    LN+  S+T+ES+I+DLEELVNKIKWL+ V +   
Sbjct: 284 ERTASNSRCNDDDYPAKKMRSNLSLCLNSMSSNTMESAILDLEELVNKIKWLRAVLKSEV 343

Query: 373 RNANAVAPSWKFL*ILILDSKIFMCLSTRCK*KVHKL 263
             + A  PSW F  I+      F   S +CK  V+ L
Sbjct: 344 PLSGAKRPSWDFCSIMRHAYSYFFSFSNKCKTSVYNL 380


>ref|XP_002263827.2| PREDICTED: uncharacterized protein LOC100263001 [Vitis vinifera]
          Length = 936

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 40/96 (41%), Positives = 58/96 (60%), Gaps = 1/96 (1%)
 Frame = -2

Query: 619  MGKLXXXXXXXXAHVERVSAAAEKTTG-RDRYNSNNKPSKRIRDSGQEYLNTSYSDTLES 443
            +GK         +HV   S   E+T G RDR   N+  S+++   G   LN+ +SDTLE+
Sbjct: 835  IGKTSSSDSVSTSHVGHTSE--ERTIGGRDRCG-NSGSSRKMGTDGSIALNSMHSDTLEA 891

Query: 442  SIMDLEELVNKIKWLKRVHQYGFRNANAVAPSWKFL 335
            +I+DLEEL NK+KW+K + ++G    NA+ P WKFL
Sbjct: 892  AILDLEELANKVKWVKGILEHGIPLPNALQPPWKFL 927


>ref|XP_002280501.1| PREDICTED: uncharacterized protein LOC100254457 [Vitis vinifera]
          Length = 376

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 37/97 (38%), Positives = 55/97 (56%)
 Frame = -2

Query: 625 VGMGKLXXXXXXXXAHVERVSAAAEKTTGRDRYNSNNKPSKRIRDSGQEYLNTSYSDTLE 446
           VG+ K         +H+   S   E T G     SN+  SK++   G   LN+ +SDTL+
Sbjct: 273 VGIRKTSSSDSVSSSHIGDTSE--EMTNGGIDRCSNSGSSKKMETDGSIALNSMHSDTLD 330

Query: 445 SSIMDLEELVNKIKWLKRVHQYGFRNANAVAPSWKFL 335
           ++I+DLEEL NK+KW+K +  +G    NA+ P W+FL
Sbjct: 331 AAILDLEELANKVKWVKGILDHGIPLPNALRPPWRFL 367


>ref|XP_003605486.1| hypothetical protein MTR_4g032190 [Medicago truncatula]
           gi|355506541|gb|AES87683.1| hypothetical protein
           MTR_4g032190 [Medicago truncatula]
          Length = 630

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 33/73 (45%), Positives = 49/73 (67%)
 Frame = -2

Query: 553 EKTTGRDRYNSNNKPSKRIRDSGQEYLNTSYSDTLESSIMDLEELVNKIKWLKRVHQYGF 374
           E+T    R N ++ P+K++R +    LN+  S+T+ES+I+DLEELVNKIKWL+ V +   
Sbjct: 461 ERTASNSRCNDDDYPAKKMRSNLSLCLNSMSSNTMESAILDLEELVNKIKWLRAVLKSEV 520

Query: 373 RNANAVAPSWKFL 335
             + A  PSW+FL
Sbjct: 521 PLSGAKRPSWEFL 533


>ref|XP_002525898.1| hypothetical protein RCOM_0540750 [Ricinus communis]
           gi|223534812|gb|EEF36502.1| hypothetical protein
           RCOM_0540750 [Ricinus communis]
          Length = 285

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 30/77 (38%), Positives = 47/77 (61%)
 Frame = -2

Query: 565 SAAAEKTTGRDRYNSNNKPSKRIRDSGQEYLNTSYSDTLESSIMDLEELVNKIKWLKRVH 386
           SA     T     + N  PSK++R      LN+   DT+E++I+ LEELVN++KW+K + 
Sbjct: 200 SAEVAGDTAEKDSHHNRGPSKKMRTDRSIMLNSMSCDTIEAAIVHLEELVNRVKWMKDIL 259

Query: 385 QYGFRNANAVAPSWKFL 335
           ++G    ++V PSWKF+
Sbjct: 260 KFGMPLPDSVQPSWKFV 276


Top