BLASTX nr result

ID: Coptis25_contig00018722 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018722
         (482 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69396.1| hypothetical protein VITISV_021034 [Vitis vinifera]   244   7e-63
emb|CAN81845.1| hypothetical protein VITISV_037891 [Vitis vinifera]   243   2e-62
emb|CAH66381.1| OSIGBa0092E09.8 [Oryza sativa Indica Group]           236   1e-60
ref|XP_002443869.1| hypothetical protein SORBIDRAFT_07g003556 [S...   236   1e-60
emb|CAN81793.1| hypothetical protein VITISV_020571 [Vitis vinifera]   236   1e-60

>emb|CAN69396.1| hypothetical protein VITISV_021034 [Vitis vinifera]
          Length = 2026

 Score =  244 bits (622), Expect = 7e-63
 Identities = 118/161 (73%), Positives = 143/161 (88%), Gaps = 1/161 (0%)
 Frame = +1

Query: 1    SQGKIDKHKARLVAKGFTQQEGVDYNETFSPVSK-DSLRIIMALVAHFDLELHQMDVKMA 177
            ++G I++ KARLVAKGFTQ+EG+DY +TFSPVSK DSLRIIMALVAHFDLELHQMDVK A
Sbjct: 648  AKGNIERFKARLVAKGFTQKEGIDYKDTFSPVSKKDSLRIIMALVAHFDLELHQMDVKTA 707

Query: 178  FLNGSLDKEVYMVQPKGFIKEGKENMVCRLKKLIYGLKQASRQWYKKFHSTISSFGFTEN 357
            FLNG+LD+++YM Q +GF K+G E++VC+LKK IYGLKQASRQWY KF++TI+ FGF EN
Sbjct: 708  FLNGNLDEDIYMEQXEGFAKKGNEHLVCKLKKSIYGLKQASRQWYIKFNNTITYFGFKEN 767

Query: 358  IVDRCIYLNISGSKFIFLVLYVDDILLPSSGLGLLHDTKDF 480
             VD+CIYL +SGSKFIFL+LYVDDILL SS LGLL +TK++
Sbjct: 768  XVDQCIYLKVSGSKFIFLILYVDDILLASSDLGLLRETKEY 808


>emb|CAN81845.1| hypothetical protein VITISV_037891 [Vitis vinifera]
          Length = 802

 Score =  243 bits (619), Expect = 2e-62
 Identities = 118/160 (73%), Positives = 141/160 (88%), Gaps = 1/160 (0%)
 Frame = +1

Query: 1   SQGKIDKHKARLVAKGFTQQEGVDYNETFSPVSK-DSLRIIMALVAHFDLELHQMDVKMA 177
           ++G I++ KARLVAKGFTQ+EG+DY +TFSPVSK DSLRIIM LV HFDLELHQMDVK A
Sbjct: 418 AKGNIERFKARLVAKGFTQKEGIDYRDTFSPVSKKDSLRIIMTLVXHFDLELHQMDVKTA 477

Query: 178 FLNGSLDKEVYMVQPKGFIKEGKENMVCRLKKLIYGLKQASRQWYKKFHSTISSFGFTEN 357
           FLNG+LD+++YM QPKGF K+G E++VC+LKK IYGLKQASRQWY KF++TI+SF F EN
Sbjct: 478 FLNGNLDEDIYMEQPKGFAKKGNEHLVCKLKKSIYGLKQASRQWYIKFNNTITSFEFKEN 537

Query: 358 IVDRCIYLNISGSKFIFLVLYVDDILLPSSGLGLLHDTKD 477
           IVD+CIYL + GSKFIFL+LYVDDILL SS LGLL +TK+
Sbjct: 538 IVDQCIYLKVIGSKFIFLILYVDDILLASSDLGLLRETKE 577


>emb|CAH66381.1| OSIGBa0092E09.8 [Oryza sativa Indica Group]
          Length = 1280

 Score =  236 bits (603), Expect = 1e-60
 Identities = 116/161 (72%), Positives = 132/161 (81%), Gaps = 1/161 (0%)
 Frame = +1

Query: 1    SQGKIDKHKARLVAKGFTQQEGVDYNETFSPVS-KDSLRIIMALVAHFDLELHQMDVKMA 177
            S+G I+K KARLVAKGFTQ+EG+DYNETFSPVS KDS RIIMALVAH+DLELHQMDVK A
Sbjct: 817  SRGNIEKFKARLVAKGFTQREGIDYNETFSPVSCKDSFRIIMALVAHYDLELHQMDVKTA 876

Query: 178  FLNGSLDKEVYMVQPKGFIKEGKENMVCRLKKLIYGLKQASRQWYKKFHSTISSFGFTEN 357
            FLNG L+++VYMVQPKGF+ +G ENM CRLK+ IYGLKQASRQWY KF  TI  FGF EN
Sbjct: 877  FLNGDLEEKVYMVQPKGFVMKGNENMGCRLKRSIYGLKQASRQWYLKFDGTIKKFGFQEN 936

Query: 358  IVDRCIYLNISGSKFIFLVLYVDDILLPSSGLGLLHDTKDF 480
            + D CIY      +FIFL+LYVDDILL SS + LL +TK F
Sbjct: 937  VEDNCIYSKFKNGRFIFLILYVDDILLASSDVSLLQETKKF 977


>ref|XP_002443869.1| hypothetical protein SORBIDRAFT_07g003556 [Sorghum bicolor]
           gi|241940219|gb|EES13364.1| hypothetical protein
           SORBIDRAFT_07g003556 [Sorghum bicolor]
          Length = 655

 Score =  236 bits (602), Expect = 1e-60
 Identities = 117/161 (72%), Positives = 130/161 (80%), Gaps = 1/161 (0%)
 Frame = +1

Query: 1   SQGKIDKHKARLVAKGFTQQEGVDYNETFSPVS-KDSLRIIMALVAHFDLELHQMDVKMA 177
           SQG I+++KARLVAKGFTQ+EG+DYNETFSPVS KDS RIIMALVAH+DLELHQMDVK A
Sbjct: 176 SQGNIERYKARLVAKGFTQREGIDYNETFSPVSCKDSFRIIMALVAHYDLELHQMDVKTA 235

Query: 178 FLNGSLDKEVYMVQPKGFIKEGKENMVCRLKKLIYGLKQASRQWYKKFHSTISSFGFTEN 357
           FLNG L++ VYM QPKGF+ EGKE M CRLKK IYG KQASRQWY KF  TI  FGF EN
Sbjct: 236 FLNGDLEENVYMAQPKGFVMEGKEQMGCRLKKSIYGWKQASRQWYLKFDKTIKHFGFKEN 295

Query: 358 IVDRCIYLNISGSKFIFLVLYVDDILLPSSGLGLLHDTKDF 480
           I D C+Y      KFIFL+LYVDDILL SS + LL +TK F
Sbjct: 296 IEDNCVYSKFKNGKFIFLILYVDDILLASSDISLLLETKKF 336


>emb|CAN81793.1| hypothetical protein VITISV_020571 [Vitis vinifera]
          Length = 1193

 Score =  236 bits (602), Expect = 1e-60
 Identities = 116/161 (72%), Positives = 136/161 (84%), Gaps = 1/161 (0%)
 Frame = +1

Query: 1    SQGKIDKHKARLVAKGFTQQEGVDYNETFSPVS-KDSLRIIMALVAHFDLELHQMDVKMA 177
            S+G I ++KARLVAKGFTQ+EG+DY ETFSPVS KDS RIIMALVAH+DLELHQMDVK A
Sbjct: 759  SKGNIVRYKARLVAKGFTQKEGIDYKETFSPVSSKDSFRIIMALVAHYDLELHQMDVKTA 818

Query: 178  FLNGSLDKEVYMVQPKGFIKEGKENMVCRLKKLIYGLKQASRQWYKKFHSTISSFGFTEN 357
            FLNG++D+ +YMVQP+ F  +  + +VCRLK+ IYGLKQASRQWY+KF   I+SFGF EN
Sbjct: 819  FLNGNIDETIYMVQPENFESKDSKQLVCRLKRSIYGLKQASRQWYRKFDQVITSFGFKEN 878

Query: 358  IVDRCIYLNISGSKFIFLVLYVDDILLPSSGLGLLHDTKDF 480
             VD+CIYL  SGSKFI LVLYVDDILL SS +GLLH+TK F
Sbjct: 879  TVDQCIYLKFSGSKFIILVLYVDDILLASSDVGLLHETKRF 919


Top