BLASTX nr result

ID: Coptis25_contig00018715 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018715
         (217 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305894.1| predicted protein [Populus trichocarpa] gi|2...   103   1e-20
ref|XP_002533481.1| Potassium channel SKOR, putative [Ricinus co...   100   9e-20
gb|AFO70199.1| potassium channel SKOR, partial [Alternanthera ph...    97   1e-18
ref|XP_003518370.1| PREDICTED: potassium channel SKOR-like [Glyc...    96   3e-18
ref|XP_002262949.1| PREDICTED: potassium channel SKOR [Vitis vin...    94   9e-18

>ref|XP_002305894.1| predicted protein [Populus trichocarpa] gi|222848858|gb|EEE86405.1|
           predicted protein [Populus trichocarpa]
          Length = 821

 Score =  103 bits (257), Expect = 1e-20
 Identities = 43/60 (71%), Positives = 52/60 (86%)
 Frame = +1

Query: 37  KQCNVFPFHPWDPKEKRKPGVVLWVPHTTEELIKTAAENLNCPDGSCILSEDAGEILEVE 216
           K+C +FPFHPW  KE+R+PGVVLW+PHT EEL+K A+E L  PDGSCILSEDAG+ILEV+
Sbjct: 752 KKCTIFPFHPWGAKEQRRPGVVLWIPHTMEELVKAASEKLQLPDGSCILSEDAGKILEVD 811


>ref|XP_002533481.1| Potassium channel SKOR, putative [Ricinus communis]
           gi|223526674|gb|EEF28913.1| Potassium channel SKOR,
           putative [Ricinus communis]
          Length = 445

 Score =  100 bits (250), Expect = 9e-20
 Identities = 42/65 (64%), Positives = 54/65 (83%)
 Frame = +1

Query: 22  DDTQRKQCNVFPFHPWDPKEKRKPGVVLWVPHTTEELIKTAAENLNCPDGSCILSEDAGE 201
           D  QR++C +FPFHPWDPKE+++PG+VLWVP T EELIK AAE LN PD S +LS+D G+
Sbjct: 364 DKIQRRKCTIFPFHPWDPKEQKRPGIVLWVPQTMEELIKAAAEQLNLPDDSFMLSKDGGK 423

Query: 202 ILEVE 216
           IL+V+
Sbjct: 424 ILDVD 428


>gb|AFO70199.1| potassium channel SKOR, partial [Alternanthera philoxeroides]
          Length = 849

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 43/66 (65%), Positives = 50/66 (75%)
 Frame = +1

Query: 19  LDDTQRKQCNVFPFHPWDPKEKRKPGVVLWVPHTTEELIKTAAENLNCPDGSCILSEDAG 198
           LD    K+C VFPFHPW PKE RKPG+VLW PH  +ELIK A+E LN P GS ILSED G
Sbjct: 769 LDKKLHKKCTVFPFHPWGPKENRKPGIVLWTPHRIDELIKMASEKLNFPRGSSILSEDGG 828

Query: 199 EILEVE 216
           +IL+V+
Sbjct: 829 KILDVD 834


>ref|XP_003518370.1| PREDICTED: potassium channel SKOR-like [Glycine max]
          Length = 849

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 40/65 (61%), Positives = 51/65 (78%)
 Frame = +1

Query: 22  DDTQRKQCNVFPFHPWDPKEKRKPGVVLWVPHTTEELIKTAAENLNCPDGSCILSEDAGE 201
           D    K+C VFPFHPWDPK+ R+ G+VLW+PH+ EELIK+AAE +    GSCILSEDAG+
Sbjct: 770 DKMHPKKCTVFPFHPWDPKDNRRHGIVLWIPHSIEELIKSAAEQIEISGGSCILSEDAGK 829

Query: 202 ILEVE 216
           I +V+
Sbjct: 830 ITDVD 834


>ref|XP_002262949.1| PREDICTED: potassium channel SKOR [Vitis vinifera]
           gi|296087079|emb|CBI33453.3| unnamed protein product
           [Vitis vinifera]
          Length = 794

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 42/69 (60%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
 Frame = +1

Query: 13  RELDDTQR-KQCNVFPFHPWDPKEKRKPGVVLWVPHTTEELIKTAAENLNCPDGSCILSE 189
           RE+ D    ++C VFPFHPWDPKE ++PG++LWVP T EELIKTA E L     SCILSE
Sbjct: 709 REITDKMHPRKCTVFPFHPWDPKEHKRPGIMLWVPQTIEELIKTATEGLQFSSESCILSE 768

Query: 190 DAGEILEVE 216
           D G+IL+V+
Sbjct: 769 DGGKILDVD 777


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