BLASTX nr result
ID: Coptis25_contig00018715
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00018715 (217 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002305894.1| predicted protein [Populus trichocarpa] gi|2... 103 1e-20 ref|XP_002533481.1| Potassium channel SKOR, putative [Ricinus co... 100 9e-20 gb|AFO70199.1| potassium channel SKOR, partial [Alternanthera ph... 97 1e-18 ref|XP_003518370.1| PREDICTED: potassium channel SKOR-like [Glyc... 96 3e-18 ref|XP_002262949.1| PREDICTED: potassium channel SKOR [Vitis vin... 94 9e-18 >ref|XP_002305894.1| predicted protein [Populus trichocarpa] gi|222848858|gb|EEE86405.1| predicted protein [Populus trichocarpa] Length = 821 Score = 103 bits (257), Expect = 1e-20 Identities = 43/60 (71%), Positives = 52/60 (86%) Frame = +1 Query: 37 KQCNVFPFHPWDPKEKRKPGVVLWVPHTTEELIKTAAENLNCPDGSCILSEDAGEILEVE 216 K+C +FPFHPW KE+R+PGVVLW+PHT EEL+K A+E L PDGSCILSEDAG+ILEV+ Sbjct: 752 KKCTIFPFHPWGAKEQRRPGVVLWIPHTMEELVKAASEKLQLPDGSCILSEDAGKILEVD 811 >ref|XP_002533481.1| Potassium channel SKOR, putative [Ricinus communis] gi|223526674|gb|EEF28913.1| Potassium channel SKOR, putative [Ricinus communis] Length = 445 Score = 100 bits (250), Expect = 9e-20 Identities = 42/65 (64%), Positives = 54/65 (83%) Frame = +1 Query: 22 DDTQRKQCNVFPFHPWDPKEKRKPGVVLWVPHTTEELIKTAAENLNCPDGSCILSEDAGE 201 D QR++C +FPFHPWDPKE+++PG+VLWVP T EELIK AAE LN PD S +LS+D G+ Sbjct: 364 DKIQRRKCTIFPFHPWDPKEQKRPGIVLWVPQTMEELIKAAAEQLNLPDDSFMLSKDGGK 423 Query: 202 ILEVE 216 IL+V+ Sbjct: 424 ILDVD 428 >gb|AFO70199.1| potassium channel SKOR, partial [Alternanthera philoxeroides] Length = 849 Score = 97.4 bits (241), Expect = 1e-18 Identities = 43/66 (65%), Positives = 50/66 (75%) Frame = +1 Query: 19 LDDTQRKQCNVFPFHPWDPKEKRKPGVVLWVPHTTEELIKTAAENLNCPDGSCILSEDAG 198 LD K+C VFPFHPW PKE RKPG+VLW PH +ELIK A+E LN P GS ILSED G Sbjct: 769 LDKKLHKKCTVFPFHPWGPKENRKPGIVLWTPHRIDELIKMASEKLNFPRGSSILSEDGG 828 Query: 199 EILEVE 216 +IL+V+ Sbjct: 829 KILDVD 834 >ref|XP_003518370.1| PREDICTED: potassium channel SKOR-like [Glycine max] Length = 849 Score = 95.9 bits (237), Expect = 3e-18 Identities = 40/65 (61%), Positives = 51/65 (78%) Frame = +1 Query: 22 DDTQRKQCNVFPFHPWDPKEKRKPGVVLWVPHTTEELIKTAAENLNCPDGSCILSEDAGE 201 D K+C VFPFHPWDPK+ R+ G+VLW+PH+ EELIK+AAE + GSCILSEDAG+ Sbjct: 770 DKMHPKKCTVFPFHPWDPKDNRRHGIVLWIPHSIEELIKSAAEQIEISGGSCILSEDAGK 829 Query: 202 ILEVE 216 I +V+ Sbjct: 830 ITDVD 834 >ref|XP_002262949.1| PREDICTED: potassium channel SKOR [Vitis vinifera] gi|296087079|emb|CBI33453.3| unnamed protein product [Vitis vinifera] Length = 794 Score = 94.4 bits (233), Expect = 9e-18 Identities = 42/69 (60%), Positives = 52/69 (75%), Gaps = 1/69 (1%) Frame = +1 Query: 13 RELDDTQR-KQCNVFPFHPWDPKEKRKPGVVLWVPHTTEELIKTAAENLNCPDGSCILSE 189 RE+ D ++C VFPFHPWDPKE ++PG++LWVP T EELIKTA E L SCILSE Sbjct: 709 REITDKMHPRKCTVFPFHPWDPKEHKRPGIMLWVPQTIEELIKTATEGLQFSSESCILSE 768 Query: 190 DAGEILEVE 216 D G+IL+V+ Sbjct: 769 DGGKILDVD 777