BLASTX nr result

ID: Coptis25_contig00018714 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018714
         (485 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN64951.1| hypothetical protein VITISV_022830 [Vitis vinifera]   172   3e-41
ref|XP_002262949.1| PREDICTED: potassium channel SKOR [Vitis vin...   169   3e-40
ref|XP_003518370.1| PREDICTED: potassium channel SKOR-like [Glyc...   163   1e-38
ref|XP_003616247.1| Potassium channel SKOR [Medicago truncatula]...   163   1e-38
ref|XP_002533481.1| Potassium channel SKOR, putative [Ricinus co...   163   1e-38

>emb|CAN64951.1| hypothetical protein VITISV_022830 [Vitis vinifera]
          Length = 559

 Score =  172 bits (435), Expect = 3e-41
 Identities = 81/113 (71%), Positives = 96/113 (84%)
 Frame = +3

Query: 3   VKEGASLKIDDAGNFLCAAVARGDLDYLKRLLSNGIDPDSMDYSHQTPLHVASADGLYLM 182
           V +GA LKIDDAG FLCA +ARGD D+LKR+LSNGIDP+S DY H+TPLHVA+++GLY M
Sbjct: 362 VNKGALLKIDDAGGFLCATIARGDSDFLKRILSNGIDPNSKDYDHRTPLHVAASEGLYFM 421

Query: 183 AKLLIEAGASVLLKDRWGHTPLDEGRKSGNKNLIKLLEEAKSVELRELDDCSQ 341
           AKLL+EAGASV  KDRWG+TPLDEG K GNKNL+KLLE+AK  +L E  DCS+
Sbjct: 422 AKLLLEAGASVFSKDRWGNTPLDEGWKCGNKNLMKLLEDAKVAQLSEFPDCSR 474



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 42/115 (36%), Positives = 59/115 (51%), Gaps = 5/115 (4%)
 Frame = +3

Query: 54  AAVARGDLDYLKRLLSNGIDPDSMDYSHQTPLHVASADGLYLMAKLLIEAGASVLLKDRW 233
           +A   GDL  LK L+  G DP+  DY  ++PLH+ASA G   +   LI+ G  V + D +
Sbjct: 282 SASYHGDLYQLKSLIRAGADPNKTDYDGRSPLHLASARGFEDIVTFLIQEGVDVNISDNF 341

Query: 234 GHTPLDEGRKSGNKNLIKLLEEAKSVELRELDD-----CSQINRVGIDDATSILS 383
           G+TPL E  K+ +  +  LL       L ++DD     C+ I R   D    ILS
Sbjct: 342 GNTPLLEAIKNAHDRVASLL--VNKGALLKIDDAGGFLCATIARGDSDFLKRILS 394


>ref|XP_002262949.1| PREDICTED: potassium channel SKOR [Vitis vinifera]
           gi|296087079|emb|CBI33453.3| unnamed protein product
           [Vitis vinifera]
          Length = 794

 Score =  169 bits (427), Expect = 3e-40
 Identities = 80/113 (70%), Positives = 95/113 (84%)
 Frame = +3

Query: 3   VKEGASLKIDDAGNFLCAAVARGDLDYLKRLLSNGIDPDSMDYSHQTPLHVASADGLYLM 182
           V +GA LKIDDAG FLCA +ARGD D+LKR+LSNGIDP+S DY H+TPLHVA+++GLY M
Sbjct: 597 VNKGALLKIDDAGGFLCATIARGDSDFLKRILSNGIDPNSKDYDHRTPLHVAASEGLYFM 656

Query: 183 AKLLIEAGASVLLKDRWGHTPLDEGRKSGNKNLIKLLEEAKSVELRELDDCSQ 341
           AKLL+EA ASV  KDRWG+TPLDEG K GNKNL+KLLE+AK  +L E  DCS+
Sbjct: 657 AKLLLEARASVFSKDRWGNTPLDEGWKCGNKNLMKLLEDAKVAQLSEFPDCSR 709



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 42/115 (36%), Positives = 59/115 (51%), Gaps = 5/115 (4%)
 Frame = +3

Query: 54  AAVARGDLDYLKRLLSNGIDPDSMDYSHQTPLHVASADGLYLMAKLLIEAGASVLLKDRW 233
           +A   GDL  LK L+  G DP+  DY  ++PLH+ASA G   +   LI+ G  V + D +
Sbjct: 517 SASYHGDLYQLKSLIRAGADPNKTDYDGRSPLHLASARGFEDIVTFLIQEGVDVNISDNF 576

Query: 234 GHTPLDEGRKSGNKNLIKLLEEAKSVELRELDD-----CSQINRVGIDDATSILS 383
           G+TPL E  K+ +  +  LL       L ++DD     C+ I R   D    ILS
Sbjct: 577 GNTPLLEAIKNAHDRVASLL--VNKGALLKIDDAGGFLCATIARGDSDFLKRILS 629


>ref|XP_003518370.1| PREDICTED: potassium channel SKOR-like [Glycine max]
          Length = 849

 Score =  163 bits (413), Expect = 1e-38
 Identities = 78/107 (72%), Positives = 94/107 (87%)
 Frame = +3

Query: 3   VKEGASLKIDDAGNFLCAAVARGDLDYLKRLLSNGIDPDSMDYSHQTPLHVASADGLYLM 182
           VKEGAS+KI++AG+FLC AVARGD DYLKRLLSNG+DP+  DY +++PLHVA+A+GLY M
Sbjct: 656 VKEGASMKIENAGSFLCTAVARGDSDYLKRLLSNGMDPNLKDYDYRSPLHVAAAEGLYFM 715

Query: 183 AKLLIEAGASVLLKDRWGHTPLDEGRKSGNKNLIKLLEEAKSVELRE 323
           AKLL+EAGASV  +DRWG+TPLDE R  GNKNLIKLLE+AKS +L E
Sbjct: 716 AKLLLEAGASVFTRDRWGNTPLDEARMCGNKNLIKLLEDAKSSQLSE 762



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 36/113 (31%), Positives = 60/113 (53%), Gaps = 3/113 (2%)
 Frame = +3

Query: 54  AAVARGDLDYLKRLLSNGIDPDSMDYSHQTPLHVASADGLYLMAKLLIEAGASVLLKDRW 233
           +A   GD+  LK L+  G DP+  DY  ++PLH+A++ G   +   LI+    V + D +
Sbjct: 576 SAAFNGDMYQLKGLIRAGADPNKADYDGRSPLHLAASRGYEDITIFLIQERVDVNIIDNF 635

Query: 234 GHTPLDEGRKSGNKNLIKLL-EEAKSVELRELDD--CSQINRVGIDDATSILS 383
           G+TPL E  K+G+  +  LL +E  S+++       C+ + R   D    +LS
Sbjct: 636 GNTPLLEAVKNGHDRVASLLVKEGASMKIENAGSFLCTAVARGDSDYLKRLLS 688


>ref|XP_003616247.1| Potassium channel SKOR [Medicago truncatula]
            gi|355517582|gb|AES99205.1| Potassium channel SKOR
            [Medicago truncatula]
          Length = 874

 Score =  163 bits (413), Expect = 1e-38
 Identities = 79/107 (73%), Positives = 93/107 (86%)
 Frame = +3

Query: 3    VKEGASLKIDDAGNFLCAAVARGDLDYLKRLLSNGIDPDSMDYSHQTPLHVASADGLYLM 182
            V+EGASLKIDD G+FLC+AVARGD DYLKRLLSNG+D +  DY ++TPLHVA+++GL  M
Sbjct: 680  VREGASLKIDDGGSFLCSAVARGDSDYLKRLLSNGMDANLKDYDYRTPLHVAASEGLIFM 739

Query: 183  AKLLIEAGASVLLKDRWGHTPLDEGRKSGNKNLIKLLEEAKSVELRE 323
            AKLL+EAGASV  KDRWG+TPLDE R SGNKNLIKLLE+AKS +L E
Sbjct: 740  AKLLLEAGASVFTKDRWGNTPLDEARMSGNKNLIKLLEDAKSAQLTE 786



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 40/111 (36%), Positives = 58/111 (52%), Gaps = 6/111 (5%)
 Frame = +3

Query: 69  GDLDYLKRLLSNGIDPDSMDYSHQTPLHVASADGLYLMAKLLIEAGASVLLKDRWGHTPL 248
           GDL  LK L+  G DP   DY  ++PLH+A+  G   +  LLI     + +KD +G+TPL
Sbjct: 605 GDLYQLKSLIRAGADPKKTDYDGRSPLHLAACRGYEDITLLLIHERVDMNVKDNFGNTPL 664

Query: 249 DEGRKSGNKNLIKLL-EEAKSVELRELDD-----CSQINRVGIDDATSILS 383
            E  K+G+  +  LL  E  S+   ++DD     CS + R   D    +LS
Sbjct: 665 LEAVKNGHDRIASLLVREGASL---KIDDGGSFLCSAVARGDSDYLKRLLS 712


>ref|XP_002533481.1| Potassium channel SKOR, putative [Ricinus communis]
           gi|223526674|gb|EEF28913.1| Potassium channel SKOR,
           putative [Ricinus communis]
          Length = 445

 Score =  163 bits (413), Expect = 1e-38
 Identities = 77/107 (71%), Positives = 94/107 (87%)
 Frame = +3

Query: 3   VKEGASLKIDDAGNFLCAAVARGDLDYLKRLLSNGIDPDSMDYSHQTPLHVASADGLYLM 182
           VKEGA L++DDAG+FLC+ V +GD D L+R+LSNGI+P+S DY H+TPLHVA+++GLY+M
Sbjct: 248 VKEGAELRMDDAGSFLCSTVLKGDSDLLRRILSNGINPNSKDYDHRTPLHVAASEGLYMM 307

Query: 183 AKLLIEAGASVLLKDRWGHTPLDEGRKSGNKNLIKLLEEAKSVELRE 323
           AKLL+EAGASV  KDRWG TPLDEGR SGNKNLIKLLE+AKS +L E
Sbjct: 308 AKLLLEAGASVCSKDRWGKTPLDEGRISGNKNLIKLLEDAKSTQLSE 354



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 43/115 (37%), Positives = 66/115 (57%), Gaps = 5/115 (4%)
 Frame = +3

Query: 54  AAVARGDLDYLKRLLSNGIDPDSMDYSHQTPLHVASADGLYLMAKLLIEAGASVLLKDRW 233
           +A   GDL  LK  +  G DP+  DY  ++PLH+A++ G   +A  LI+ G  + +KD++
Sbjct: 168 SAAYHGDLYQLKGFVRAGADPNRTDYDGRSPLHLAASRGYEDIACFLIQEGVDINIKDKF 227

Query: 234 GHTPLDEGRKSGNKNLIKLLEEAKSVELRELDD-----CSQINRVGIDDATSILS 383
           G+TPL E  KSG+ ++  LL + +  ELR +DD     CS + +   D    ILS
Sbjct: 228 GNTPLLEAIKSGHDHVASLLVK-EGAELR-MDDAGSFLCSTVLKGDSDLLRRILS 280


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