BLASTX nr result

ID: Coptis25_contig00018713 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018713
         (546 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533481.1| Potassium channel SKOR, putative [Ricinus co...   261   4e-68
ref|XP_002305894.1| predicted protein [Populus trichocarpa] gi|2...   258   3e-67
emb|CAN64951.1| hypothetical protein VITISV_022830 [Vitis vinifera]   256   1e-66
ref|XP_003518370.1| PREDICTED: potassium channel SKOR-like [Glyc...   255   3e-66
ref|XP_003616247.1| Potassium channel SKOR [Medicago truncatula]...   255   3e-66

>ref|XP_002533481.1| Potassium channel SKOR, putative [Ricinus communis]
           gi|223526674|gb|EEF28913.1| Potassium channel SKOR,
           putative [Ricinus communis]
          Length = 445

 Score =  261 bits (668), Expect = 4e-68
 Identities = 122/181 (67%), Positives = 150/181 (82%)
 Frame = +3

Query: 3   VKEGASLKIDDAGSFLCAAVARGDSDYLKRLLSNGIDPDSMDYSHRTPLHVASADGLYLM 182
           VKEGA L++DDAGSFLC+ V +GDSD L+R+LSNGI+P+S DY HRTPLHVA+++GLY+M
Sbjct: 248 VKEGAELRMDDAGSFLCSTVLKGDSDLLRRILSNGINPNSKDYDHRTPLHVAASEGLYMM 307

Query: 183 TKLLIEAGASVLLKDRWGHTPLDEGRKSGNKNLIKLLEEAKSAELRELGDHSKITRDDTQ 362
            KLL+EAGASV  KDRWG TPLDEGR SGNKNLIKLLE+AKS +L E   H++   D  Q
Sbjct: 308 AKLLLEAGASVCSKDRWGKTPLDEGRISGNKNLIKLLEDAKSTQLSEFLPHTQELTDKIQ 367

Query: 363 RKKCNVFPFHPWDPKEKRKQGVVLWVPHTTEELIKTAAENLNCPDGSCILSEDAGEILEV 542
           R+KC +FPFHPWDPKE+++ G+VLWVP T EELIK AAE LN PD S +LS+D G+IL+V
Sbjct: 368 RRKCTIFPFHPWDPKEQKRPGIVLWVPQTMEELIKAAAEQLNLPDDSFMLSKDGGKILDV 427

Query: 543 E 545
           +
Sbjct: 428 D 428



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 35/89 (39%), Positives = 54/89 (60%)
 Frame = +3

Query: 54  AAVARGDSDYLKRLLSNGIDPDSMDYSHRTPLHVASADGLYLMTKLLIEAGASVLLKDRW 233
           +A   GD   LK  +  G DP+  DY  R+PLH+A++ G   +   LI+ G  + +KD++
Sbjct: 168 SAAYHGDLYQLKGFVRAGADPNRTDYDGRSPLHLAASRGYEDIACFLIQEGVDINIKDKF 227

Query: 234 GHTPLDEGRKSGNKNLIKLLEEAKSAELR 320
           G+TPL E  KSG+ ++  LL + + AELR
Sbjct: 228 GNTPLLEAIKSGHDHVASLLVK-EGAELR 255


>ref|XP_002305894.1| predicted protein [Populus trichocarpa] gi|222848858|gb|EEE86405.1|
            predicted protein [Populus trichocarpa]
          Length = 821

 Score =  258 bits (660), Expect = 3e-67
 Identities = 126/180 (70%), Positives = 146/180 (81%)
 Frame = +3

Query: 6    KEGASLKIDDAGSFLCAAVARGDSDYLKRLLSNGIDPDSMDYSHRTPLHVASADGLYLMT 185
            ++GA L IDDAGS LC AVARGDSD+LKR+LSNGIDP+S DY HRTPLHVA+++GLYLM 
Sbjct: 632  EQGAILNIDDAGSVLCRAVARGDSDFLKRVLSNGIDPNSKDYDHRTPLHVAASEGLYLMA 691

Query: 186  KLLIEAGASVLLKDRWGHTPLDEGRKSGNKNLIKLLEEAKSAELRELGDHSKITRDDTQR 365
            KLLIEAGASV  KDRWG+TPL EGR  GNKNLIKLLEEAKS++  E    S  T +    
Sbjct: 692  KLLIEAGASVFSKDRWGNTPLVEGRICGNKNLIKLLEEAKSSQKLEFHYASHETTEKMLP 751

Query: 366  KKCNVFPFHPWDPKEKRKQGVVLWVPHTTEELIKTAAENLNCPDGSCILSEDAGEILEVE 545
            KKC +FPFHPW  KE+R+ GVVLW+PHT EEL+K A+E L  PDGSCILSEDAG+ILEV+
Sbjct: 752  KKCTIFPFHPWGAKEQRRPGVVLWIPHTMEELVKAASEKLQLPDGSCILSEDAGKILEVD 811



 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 32/77 (41%), Positives = 47/77 (61%)
 Frame = +3

Query: 69  GDSDYLKRLLSNGIDPDSMDYSHRTPLHVASADGLYLMTKLLIEAGASVLLKDRWGHTPL 248
           GD   LK L+  G DP+  DY  R+PLH+A++ G    T  LI+ G  + +KD++G+TPL
Sbjct: 556 GDLYQLKGLIRAGADPNRTDYDGRSPLHLAASRGYEDTTLFLIQEGVDINIKDKFGNTPL 615

Query: 249 DEGRKSGNKNLIKLLEE 299
            E  K+G+  +  LL E
Sbjct: 616 LEAIKNGHDRVASLLSE 632


>emb|CAN64951.1| hypothetical protein VITISV_022830 [Vitis vinifera]
          Length = 559

 Score =  256 bits (655), Expect = 1e-66
 Identities = 122/181 (67%), Positives = 144/181 (79%)
 Frame = +3

Query: 3   VKEGASLKIDDAGSFLCAAVARGDSDYLKRLLSNGIDPDSMDYSHRTPLHVASADGLYLM 182
           V +GA LKIDDAG FLCA +ARGDSD+LKR+LSNGIDP+S DY HRTPLHVA+++GLY M
Sbjct: 362 VNKGALLKIDDAGGFLCATIARGDSDFLKRILSNGIDPNSKDYDHRTPLHVAASEGLYFM 421

Query: 183 TKLLIEAGASVLLKDRWGHTPLDEGRKSGNKNLIKLLEEAKSAELRELGDHSKITRDDTQ 362
            KLL+EAGASV  KDRWG+TPLDEG K GNKNL+KLLE+AK A+L E  D S+   D   
Sbjct: 422 AKLLLEAGASVFSKDRWGNTPLDEGWKCGNKNLMKLLEDAKVAQLSEFPDCSREITDKMH 481

Query: 363 RKKCNVFPFHPWDPKEKRKQGVVLWVPHTTEELIKTAAENLNCPDGSCILSEDAGEILEV 542
            +KC VFPFHPWDPKE ++ G++LWVP T EELIKTA E L     SCILSED G+IL+V
Sbjct: 482 PRKCTVFPFHPWDPKEHKRPGIMLWVPQTIEELIKTATEGLQFSSESCILSEDGGKILDV 541

Query: 543 E 545
           +
Sbjct: 542 D 542



 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 32/80 (40%), Positives = 45/80 (56%)
 Frame = +3

Query: 54  AAVARGDSDYLKRLLSNGIDPDSMDYSHRTPLHVASADGLYLMTKLLIEAGASVLLKDRW 233
           +A   GD   LK L+  G DP+  DY  R+PLH+ASA G   +   LI+ G  V + D +
Sbjct: 282 SASYHGDLYQLKSLIRAGADPNKTDYDGRSPLHLASARGFEDIVTFLIQEGVDVNISDNF 341

Query: 234 GHTPLDEGRKSGNKNLIKLL 293
           G+TPL E  K+ +  +  LL
Sbjct: 342 GNTPLLEAIKNAHDRVASLL 361


>ref|XP_003518370.1| PREDICTED: potassium channel SKOR-like [Glycine max]
          Length = 849

 Score =  255 bits (652), Expect = 3e-66
 Identities = 122/181 (67%), Positives = 148/181 (81%)
 Frame = +3

Query: 3    VKEGASLKIDDAGSFLCAAVARGDSDYLKRLLSNGIDPDSMDYSHRTPLHVASADGLYLM 182
            VKEGAS+KI++AGSFLC AVARGDSDYLKRLLSNG+DP+  DY +R+PLHVA+A+GLY M
Sbjct: 656  VKEGASMKIENAGSFLCTAVARGDSDYLKRLLSNGMDPNLKDYDYRSPLHVAAAEGLYFM 715

Query: 183  TKLLIEAGASVLLKDRWGHTPLDEGRKSGNKNLIKLLEEAKSAELRELGDHSKITRDDTQ 362
             KLL+EAGASV  +DRWG+TPLDE R  GNKNLIKLLE+AKS++L E    S+   D   
Sbjct: 716  AKLLLEAGASVFTRDRWGNTPLDEARMCGNKNLIKLLEDAKSSQLSEF--PSQEFTDKMH 773

Query: 363  RKKCNVFPFHPWDPKEKRKQGVVLWVPHTTEELIKTAAENLNCPDGSCILSEDAGEILEV 542
             KKC VFPFHPWDPK+ R+ G+VLW+PH+ EELIK+AAE +    GSCILSEDAG+I +V
Sbjct: 774  PKKCTVFPFHPWDPKDNRRHGIVLWIPHSIEELIKSAAEQIEISGGSCILSEDAGKITDV 833

Query: 543  E 545
            +
Sbjct: 834  D 834



 Score = 58.9 bits (141), Expect = 5e-07
 Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 3/109 (2%)
 Frame = +3

Query: 54  AAVARGDSDYLKRLLSNGIDPDSMDYSHRTPLHVASADGLYLMTKLLIEAGASVLLKDRW 233
           +A   GD   LK L+  G DP+  DY  R+PLH+A++ G   +T  LI+    V + D +
Sbjct: 576 SAAFNGDMYQLKGLIRAGADPNKADYDGRSPLHLAASRGYEDITIFLIQERVDVNIIDNF 635

Query: 234 GHTPLDEGRKSGNKNLIKLL-EEAKSAELRELGDH--SKITRDDTQRKK 371
           G+TPL E  K+G+  +  LL +E  S ++   G    + + R D+   K
Sbjct: 636 GNTPLLEAVKNGHDRVASLLVKEGASMKIENAGSFLCTAVARGDSDYLK 684


>ref|XP_003616247.1| Potassium channel SKOR [Medicago truncatula]
            gi|355517582|gb|AES99205.1| Potassium channel SKOR
            [Medicago truncatula]
          Length = 874

 Score =  255 bits (652), Expect = 3e-66
 Identities = 123/180 (68%), Positives = 147/180 (81%)
 Frame = +3

Query: 3    VKEGASLKIDDAGSFLCAAVARGDSDYLKRLLSNGIDPDSMDYSHRTPLHVASADGLYLM 182
            V+EGASLKIDD GSFLC+AVARGDSDYLKRLLSNG+D +  DY +RTPLHVA+++GL  M
Sbjct: 680  VREGASLKIDDGGSFLCSAVARGDSDYLKRLLSNGMDANLKDYDYRTPLHVAASEGLIFM 739

Query: 183  TKLLIEAGASVLLKDRWGHTPLDEGRKSGNKNLIKLLEEAKSAELRELGDHSKITRDDTQ 362
             KLL+EAGASV  KDRWG+TPLDE R SGNKNLIKLLE+AKSA+L E     +IT D   
Sbjct: 740  AKLLLEAGASVFTKDRWGNTPLDEARMSGNKNLIKLLEDAKSAQLTEFPFPQEIT-DKVH 798

Query: 363  RKKCNVFPFHPWDPKEKRKQGVVLWVPHTTEELIKTAAENLNCPDGSCILSEDAGEILEV 542
             KKC VFPFHPWDPKE+R+ G+VLW+PHT +ELI TAAE +     +CILSEDAG+I+++
Sbjct: 799  PKKCTVFPFHPWDPKEQRRNGIVLWIPHTIQELIITAAEQIGFSSDACILSEDAGKIIDI 858



 Score = 59.3 bits (142), Expect = 4e-07
 Identities = 38/104 (36%), Positives = 55/104 (52%), Gaps = 3/104 (2%)
 Frame = +3

Query: 69  GDSDYLKRLLSNGIDPDSMDYSHRTPLHVASADGLYLMTKLLIEAGASVLLKDRWGHTPL 248
           GD   LK L+  G DP   DY  R+PLH+A+  G   +T LLI     + +KD +G+TPL
Sbjct: 605 GDLYQLKSLIRAGADPKKTDYDGRSPLHLAACRGYEDITLLLIHERVDMNVKDNFGNTPL 664

Query: 249 DEGRKSGNKNLIKLL-EEAKSAELRELGDH--SKITRDDTQRKK 371
            E  K+G+  +  LL  E  S ++ + G    S + R D+   K
Sbjct: 665 LEAVKNGHDRIASLLVREGASLKIDDGGSFLCSAVARGDSDYLK 708


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