BLASTX nr result

ID: Coptis25_contig00018705 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018705
         (268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307155.1| predicted protein [Populus trichocarpa] gi|1...    83   3e-14
ref|XP_002520916.1| conserved hypothetical protein [Ricinus comm...    81   1e-13
ref|XP_002266745.1| PREDICTED: protein PHYTOCHROME KINASE SUBSTR...    77   2e-12
ref|XP_002310640.1| predicted protein [Populus trichocarpa] gi|2...    76   2e-12
ref|XP_003553373.1| PREDICTED: protein PHYTOCHROME KINASE SUBSTR...    67   2e-09

>ref|XP_002307155.1| predicted protein [Populus trichocarpa] gi|118485620|gb|ABK94660.1|
           unknown [Populus trichocarpa]
           gi|222856604|gb|EEE94151.1| predicted protein [Populus
           trichocarpa]
          Length = 551

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 41/60 (68%), Positives = 48/60 (80%)
 Frame = +1

Query: 1   SQSGLLSNPPGSIAVSMRNLRLDGKKKNNKGSPGRWFFRRRCPCSGKKSVQIEEKCSEPK 180
           SQ+GLLSNPPG+IAVSMRN   +  K+  KGS  +W  RR+CPCSGKKSVQIEEK SEP+
Sbjct: 140 SQAGLLSNPPGAIAVSMRNPPRNDDKR--KGSGTKWLLRRKCPCSGKKSVQIEEKLSEPR 197


>ref|XP_002520916.1| conserved hypothetical protein [Ricinus communis]
           gi|223539882|gb|EEF41461.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 549

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 43/93 (46%), Positives = 58/93 (62%), Gaps = 4/93 (4%)
 Frame = +1

Query: 1   SQSGLLSNPPGSIAVSMRNLRLDGKKKNNKGSPGRWFFRRRCPCSGKKSVQIEEKCSEP- 177
           SQ+GLLSNPPG+IAVSMRN     +KK  KGS  +W   R+CPC+GKKS+Q+EEK SEP 
Sbjct: 134 SQTGLLSNPPGAIAVSMRNPPPSDEKK--KGSKAKWLLGRKCPCAGKKSIQVEEKLSEPI 191

Query: 178 ---KITIHSNCNSSAALNLHSKQSSKTEEISVD 267
              ++  H + ++   L      SS+    + D
Sbjct: 192 TPSRLVDHKSKDTDRNLQRKIPDSSEKSSAATD 224


>ref|XP_002266745.1| PREDICTED: protein PHYTOCHROME KINASE SUBSTRATE 4 [Vitis vinifera]
          Length = 550

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 40/81 (49%), Positives = 56/81 (69%)
 Frame = +1

Query: 1   SQSGLLSNPPGSIAVSMRNLRLDGKKKNNKGSPGRWFFRRRCPCSGKKSVQIEEKCSEPK 180
           SQ+GLL NPPG+I VS+R++    +KKN  G   +WFF R+CPCSGKK+V+I+EK SEP+
Sbjct: 131 SQTGLLCNPPGTIGVSVRSI--GSEKKNVSGR--KWFFGRKCPCSGKKAVEIQEKVSEPR 186

Query: 181 ITIHSNCNSSAALNLHSKQSS 243
             I  N N  +     +++SS
Sbjct: 187 SPIRLNHNLGSDPKRPTERSS 207


>ref|XP_002310640.1| predicted protein [Populus trichocarpa] gi|222853543|gb|EEE91090.1|
           predicted protein [Populus trichocarpa]
          Length = 540

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 39/60 (65%), Positives = 45/60 (75%)
 Frame = +1

Query: 1   SQSGLLSNPPGSIAVSMRNLRLDGKKKNNKGSPGRWFFRRRCPCSGKKSVQIEEKCSEPK 180
           SQ+GLLSNPPG+IAVSMRN   +  KK  KG   +W   R+CPCSGKKSVQIEEK SE +
Sbjct: 142 SQTGLLSNPPGAIAVSMRNPPRNDDKK--KGCGTKWLLGRKCPCSGKKSVQIEEKLSEAR 199


>ref|XP_003553373.1| PREDICTED: protein PHYTOCHROME KINASE SUBSTRATE 4-like [Glycine
           max]
          Length = 463

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 32/63 (50%), Positives = 43/63 (68%)
 Frame = +1

Query: 1   SQSGLLSNPPGSIAVSMRNLRLDGKKKNNKGSPGRWFFRRRCPCSGKKSVQIEEKCSEPK 180
           SQ+GLLS+PPG+I VSM+N +     +N K S   W  RR+CPC+GKKSV+++E   E K
Sbjct: 122 SQTGLLSHPPGAIPVSMQNPQNPKNLQNPKLSKSIWLLRRKCPCTGKKSVRVKESTQESK 181

Query: 181 ITI 189
             I
Sbjct: 182 TQI 184


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