BLASTX nr result

ID: Coptis25_contig00018702 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018702
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310360.1| predicted protein [Populus trichocarpa] gi|2...   174   9e-42
ref|XP_002513137.1| conserved hypothetical protein [Ricinus comm...   172   2e-41
emb|CAN77784.1| hypothetical protein VITISV_014471 [Vitis vinifera]   166   1e-39
ref|XP_002268460.1| PREDICTED: uncharacterized protein LOC100252...   164   5e-39
ref|XP_002268202.1| PREDICTED: uncharacterized protein LOC100257...   164   5e-39

>ref|XP_002310360.1| predicted protein [Populus trichocarpa] gi|222853263|gb|EEE90810.1|
           predicted protein [Populus trichocarpa]
          Length = 430

 Score =  174 bits (440), Expect = 9e-42
 Identities = 79/92 (85%), Positives = 86/92 (93%)
 Frame = -2

Query: 417 SEELLVRCIEKNPFVGEPHVVLGQVYLTKGMFDEAEREAEKGLTLILEWGSPWDKRTSWE 238
           +EELLV  IEKNPFVGEPHVVLGQ YLTKG F+EAE+EAE+G+TL+LEWGSPWDKR SWE
Sbjct: 339 AEELLVSSIEKNPFVGEPHVVLGQFYLTKGRFEEAEKEAERGVTLLLEWGSPWDKRMSWE 398

Query: 237 GWIAWARVLVMKAKEKSWPQQSWGILNLGLVR 142
           GWIAWARVL+MKAKEKSWPQ SWGILNLGLVR
Sbjct: 399 GWIAWARVLLMKAKEKSWPQTSWGILNLGLVR 430


>ref|XP_002513137.1| conserved hypothetical protein [Ricinus communis]
           gi|223548148|gb|EEF49640.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 424

 Score =  172 bits (437), Expect = 2e-41
 Identities = 78/91 (85%), Positives = 84/91 (92%)
 Frame = -2

Query: 414 EELLVRCIEKNPFVGEPHVVLGQVYLTKGMFDEAEREAEKGLTLILEWGSPWDKRTSWEG 235
           EELL+ CIEKNP+VGEPHVVL QVYLTK  F+EAEREAEKG+TL+LEWGSPWDKRTSWEG
Sbjct: 334 EELLLSCIEKNPYVGEPHVVLSQVYLTKDRFEEAEREAEKGVTLMLEWGSPWDKRTSWEG 393

Query: 234 WIAWARVLVMKAKEKSWPQQSWGILNLGLVR 142
           WIAW RVL+MKAKEKSWP  SWGILNLGLVR
Sbjct: 394 WIAWGRVLLMKAKEKSWPNTSWGILNLGLVR 424


>emb|CAN77784.1| hypothetical protein VITISV_014471 [Vitis vinifera]
          Length = 402

 Score =  166 bits (421), Expect = 1e-39
 Identities = 73/92 (79%), Positives = 83/92 (90%)
 Frame = -2

Query: 417 SEELLVRCIEKNPFVGEPHVVLGQVYLTKGMFDEAEREAEKGLTLILEWGSPWDKRTSWE 238
           +EELL RC+EKNPFVGEPHVVL Q+YLT G F+EAEREAEKGL L+LEWGSPWDKR +WE
Sbjct: 311 AEELLGRCVEKNPFVGEPHVVLAQIYLTNGRFEEAEREAEKGLKLMLEWGSPWDKRMTWE 370

Query: 237 GWIAWARVLVMKAKEKSWPQQSWGILNLGLVR 142
           GWIAW RVL+MKAKE+SWP  SWGI+NLGLV+
Sbjct: 371 GWIAWNRVLLMKAKERSWPNTSWGIINLGLVK 402


>ref|XP_002268460.1| PREDICTED: uncharacterized protein LOC100252690 [Vitis vinifera]
          Length = 426

 Score =  164 bits (416), Expect = 5e-39
 Identities = 72/92 (78%), Positives = 83/92 (90%)
 Frame = -2

Query: 417 SEELLVRCIEKNPFVGEPHVVLGQVYLTKGMFDEAEREAEKGLTLILEWGSPWDKRTSWE 238
           +E+LL RC+EKNPFVGEPHVVL Q+YLT G F+EAEREAEKGL L+LEWG+PWDKR +WE
Sbjct: 335 AEKLLGRCVEKNPFVGEPHVVLAQIYLTNGRFEEAEREAEKGLKLMLEWGNPWDKRMTWE 394

Query: 237 GWIAWARVLVMKAKEKSWPQQSWGILNLGLVR 142
           GWIAW RVL+MKAKE+SWP  SWGILNLGLV+
Sbjct: 395 GWIAWNRVLLMKAKERSWPNTSWGILNLGLVK 426


>ref|XP_002268202.1| PREDICTED: uncharacterized protein LOC100257837 [Vitis vinifera]
          Length = 426

 Score =  164 bits (416), Expect = 5e-39
 Identities = 72/92 (78%), Positives = 83/92 (90%)
 Frame = -2

Query: 417 SEELLVRCIEKNPFVGEPHVVLGQVYLTKGMFDEAEREAEKGLTLILEWGSPWDKRTSWE 238
           +E+LL RC+EKNPFVGEPHVVL Q+YLT G F+EAEREAEKGL L+LEWG+PWDKR +WE
Sbjct: 335 AEKLLGRCVEKNPFVGEPHVVLAQIYLTNGRFEEAEREAEKGLKLMLEWGNPWDKRMTWE 394

Query: 237 GWIAWARVLVMKAKEKSWPQQSWGILNLGLVR 142
           GWIAW RVL+MKAKE+SWP  SWGILNLGLV+
Sbjct: 395 GWIAWNRVLLMKAKERSWPNTSWGILNLGLVK 426


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