BLASTX nr result

ID: Coptis25_contig00018696 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018696
         (1248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274716.1| PREDICTED: uncharacterized protein LOC100257...   357   e-119
ref|XP_003531080.1| PREDICTED: glycogen synthase-like [Glycine max]   324   e-111
ref|NP_193558.3| starch synthase 4 [Arabidopsis thaliana] gi|122...   321   e-109
ref|XP_003524791.1| PREDICTED: uncharacterized protein LOC100788...   318   e-109
emb|CAA16796.1| starch synthase-like protein [Arabidopsis thalia...   321   e-102

>ref|XP_002274716.1| PREDICTED: uncharacterized protein LOC100257130 [Vitis vinifera]
            gi|297740652|emb|CBI30834.3| unnamed protein product
            [Vitis vinifera]
          Length = 1011

 Score =  357 bits (916), Expect(2) = e-119
 Identities = 202/337 (59%), Positives = 248/337 (73%), Gaps = 9/337 (2%)
 Frame = -3

Query: 1210 GFDKN-DKNILLLK*ARVCTLEDLDKILIEKEALQEDVNTLEMRLAETDARIKVAAQEKI 1034
            G  KN +KNILLL  ARV  L+DL+KIL EK+ALQ ++N LEMRLAET+ARIKVAAQEKI
Sbjct: 148  GMLKNAEKNILLLNQARVRALQDLEKILTEKDALQGEINILEMRLAETNARIKVAAQEKI 207

Query: 1033 HVXXXXXXXXXXXXXXXXKGVTEGID-EKNIVSNKDNGSFNSLSKELRLLRKENMSLKDD 857
            HV                +GVTEG   + +   NK     +SL KEL LLR EN+SLKDD
Sbjct: 208  HVEILEEQLVNLRNELSHRGVTEGSGADMHENWNKAFDGVHSLGKELSLLRTENVSLKDD 267

Query: 856  I*LLQEQLSNVNETDQRVIALESECVSLQATLKNLESRLVVAQVDLLKLSPLKLECKDLW 677
            I  L+E+LS+V +TD+RV+ LE E   L++ LK LE +LV +Q D+ KLS LK ECK+LW
Sbjct: 268  ILALKEELSHVQKTDKRVVMLEKERSFLESALKELEFKLVASQEDVSKLSTLKFECKNLW 327

Query: 676  VKVGSLQELINKAAKQADEAISVLQQNHEFRKKVDSLEESLEEAKLHLSSSTKMQQ---- 509
             +V +LQ L+++A  QAD+AI VL+QN E RKKVD LEESLEEA ++  SS KMQQ    
Sbjct: 328  DRVENLQVLLDRATDQADKAILVLEQNQELRKKVDMLEESLEEANVYKLSSEKMQQYNDL 387

Query: 508  ---KIRHLEESLQRSDEEIHSHVQLYQESVQEFQDVLNNLKEESKRKASDEPVIDMPWEF 338
               KI+ LEE L RSDEEI S+V+LYQES++EFQD LNNLKEESKR+A +EPV DMPW+F
Sbjct: 388  MQKKIKLLEERLDRSDEEILSYVKLYQESIKEFQDTLNNLKEESKRRALNEPVDDMPWDF 447

Query: 337  WSRILLMIDGWFLEKKISSNDAELLGEMAWKRDTDLR 227
            WSR+LL+IDGW LEKKIS+NDA+LL EM WKRD  +R
Sbjct: 448  WSRLLLIIDGWLLEKKISANDAKLLREMVWKRDGRIR 484



 Score = 99.4 bits (246), Expect(2) = e-119
 Identities = 50/82 (60%), Positives = 57/82 (69%)
 Frame = -1

Query: 246 KETRIYDAYLACKKKNEIEIVATFLRLIASPTSQGLHIIHIAAEMAPVAKXXXXXXXXXX 67
           ++ RI DAYL CK  NE E VA FL+L +SP    LH+IHIAAEMAPVAK          
Sbjct: 479 RDGRIRDAYLVCKDTNEHEAVAIFLKLTSSPKRSRLHVIHIAAEMAPVAKVGGLGDVVSG 538

Query: 66  XGKALQKKGHLVEIVIPKYDCM 1
             +ALQKKGHLVEIV+PKYDCM
Sbjct: 539 LSRALQKKGHLVEIVLPKYDCM 560


>ref|XP_003531080.1| PREDICTED: glycogen synthase-like [Glycine max]
          Length = 873

 Score =  324 bits (830), Expect(2) = e-111
 Identities = 184/338 (54%), Positives = 237/338 (70%), Gaps = 19/338 (5%)
 Frame = -3

Query: 1195 DKNILLLK*ARVCTLEDLDKILIEKEALQEDVNTLEMRLAETDARIKVAAQEKIHVXXXX 1016
            +KNILLL  ARV +LEDL+KIL EKEALQ ++N LE RLAETDA+IKVA QEKIHV    
Sbjct: 6    EKNILLLNEARVRSLEDLEKILAEKEALQGEINVLETRLAETDAQIKVANQEKIHVELLE 65

Query: 1015 XXXXXXXXXXXXKGVTEG------------IDEKNIVSNKDNGSFNSLSKELRLLRKENM 872
                        K  TEG            + + N +S+ D  S +SL++EL  LR EN 
Sbjct: 66   GQLEKLRNELAQKESTEGKYSELHDLQNGGLSDANPLSHND--SIHSLTEELNSLRAENA 123

Query: 871  SLKDDI*LLQEQLSNVNETDQRVIALESECVSLQATLKNLESRLVVAQVDLLKLSPLKLE 692
            SLK+ I   + QLS+    D+R++ALE E  SL++ LK+LES+L ++Q D+ K+S L +E
Sbjct: 124  SLKNTIESFKTQLSDTKNNDERLVALEKERSSLESALKDLESKLSISQDDVSKISTLTVE 183

Query: 691  CKDLWVKVGSLQELINKAAKQADEAISVLQQNHEFRKKVDSLEESLEEAKLHLSSSTK-- 518
             KDLW KV +LQ L++KA KQAD+A+ VLQQN + R+KVD LEESLEEA ++  SS K  
Sbjct: 184  YKDLWDKVENLQSLLDKATKQADQAVIVLQQNQDLRRKVDKLEESLEEANIYKLSSDKLQ 243

Query: 517  -----MQQKIRHLEESLQRSDEEIHSHVQLYQESVQEFQDVLNNLKEESKRKASDEPVID 353
                 MQQK++ LE+ LQ++DEEI+S+VQLYQ+SV+EFQD L+ LKEESK+   +EPV D
Sbjct: 244  KYSELMQQKLKLLEDRLQKTDEEINSYVQLYQQSVKEFQDTLDTLKEESKKGNLEEPVED 303

Query: 352  MPWEFWSRILLMIDGWFLEKKISSNDAELLGEMAWKRD 239
            MPWEFWS++LL+IDGW LEKKIS +DA LL E  WKRD
Sbjct: 304  MPWEFWSQLLLLIDGWKLEKKISVDDASLLREKVWKRD 341



 Score =  105 bits (261), Expect(2) = e-111
 Identities = 53/87 (60%), Positives = 64/87 (73%)
 Frame = -1

Query: 261 EKWHGKETRIYDAYLACKKKNEIEIVATFLRLIASPTSQGLHIIHIAAEMAPVAKXXXXX 82
           EK   ++ RI D Y+ACKK++E E ++ FL L++S TS GLH+IHIAAEMAPVAK     
Sbjct: 335 EKVWKRDRRIIDTYIACKKQSEQEAISAFLGLLSSATSPGLHVIHIAAEMAPVAKVGGLG 394

Query: 81  XXXXXXGKALQKKGHLVEIVIPKYDCM 1
                 GKALQKKGHLVEIV+PKYDCM
Sbjct: 395 DVVSGLGKALQKKGHLVEIVLPKYDCM 421


>ref|NP_193558.3| starch synthase 4 [Arabidopsis thaliana]
            gi|122230204|sp|Q0WVX5.1|SSY4_ARATH RecName:
            Full=Probable starch synthase 4,
            chloroplastic/amyloplastic; Short=AtSS4; AltName:
            Full=Soluble starch synthase IV; Flags: Precursor
            gi|110741548|dbj|BAE98723.1| starch synthase-like protein
            [Arabidopsis thaliana] gi|332658615|gb|AEE84015.1| starch
            synthase 4 [Arabidopsis thaliana]
          Length = 1040

 Score =  321 bits (823), Expect(2) = e-109
 Identities = 168/326 (51%), Positives = 233/326 (71%), Gaps = 7/326 (2%)
 Frame = -3

Query: 1195 DKNILLLK*ARVCTLEDLDKILIEKEALQEDVNTLEMRLAETDARIKVAAQEKIHVXXXX 1016
            +KNIL L  AR   L+DL+KIL +KEALQ ++N LEM+L+ETD RIK AAQEK HV    
Sbjct: 196  EKNILRLDEARATALDDLNKILSDKEALQGEINVLEMKLSETDERIKTAAQEKAHVELLE 255

Query: 1015 XXXXXXXXXXXXKGVTEGIDEKNIVSNKDNGSFNSLSKELRLLRKENMSLKDDI*LLQEQ 836
                            E +  + I   + +G   +LSKEL  L+ EN+SL++DI +L+ +
Sbjct: 256  EQL-------------EKLRHEMISPIESDGYVLALSKELETLKLENLSLRNDIEMLKSE 302

Query: 835  LSNVNETDQRVIALESECVSLQATLKNLESRLVVAQVDLLKLSPLKLECKDLWVKVGSLQ 656
            L +V +T +RV+ LE EC  L++++K+LES+L V+Q D+ +LS LK+EC DLW KV +LQ
Sbjct: 303  LDSVKDTGERVVVLEKECSGLESSVKDLESKLSVSQEDVSQLSTLKIECTDLWAKVETLQ 362

Query: 655  ELINKAAKQADEAISVLQQNHEFRKKVDSLEESLEEAKLHLSSSTKMQQ-------KIRH 497
             L+++A KQA++A+ VLQQN + R KVD +EESL+EA ++  SS K+QQ       K+  
Sbjct: 363  LLLDRATKQAEQAVIVLQQNQDLRNKVDKIEESLKEANVYKESSEKIQQYNELMQHKVTL 422

Query: 496  LEESLQRSDEEIHSHVQLYQESVQEFQDVLNNLKEESKRKASDEPVIDMPWEFWSRILLM 317
            LEE L++SD EI S+VQLYQES++EFQ+ L +LKEESK+K+ DEPV DMPW++WSR+LL 
Sbjct: 423  LEERLEKSDAEIFSYVQLYQESIKEFQETLESLKEESKKKSRDEPVDDMPWDYWSRLLLT 482

Query: 316  IDGWFLEKKISSNDAELLGEMAWKRD 239
            +DGW LEKKI+SNDA+LL +M WK+D
Sbjct: 483  VDGWLLEKKIASNDADLLRDMVWKKD 508



 Score =  101 bits (251), Expect(2) = e-109
 Identities = 47/82 (57%), Positives = 62/82 (75%)
 Frame = -1

Query: 246 KETRIYDAYLACKKKNEIEIVATFLRLIASPTSQGLHIIHIAAEMAPVAKXXXXXXXXXX 67
           K+ RI+D Y+  K KNE + ++ FL+L++SPTS GL+++HIAAEMAPVAK          
Sbjct: 507 KDRRIHDTYIDVKDKNERDAISAFLKLVSSPTSSGLYVVHIAAEMAPVAKVGGLGDVVAG 566

Query: 66  XGKALQKKGHLVEIVIPKYDCM 1
            GKALQ+KGHLVEI++PKYDCM
Sbjct: 567 LGKALQRKGHLVEIILPKYDCM 588


>ref|XP_003524791.1| PREDICTED: uncharacterized protein LOC100788308 [Glycine max]
          Length = 989

 Score =  318 bits (815), Expect(2) = e-109
 Identities = 181/336 (53%), Positives = 233/336 (69%), Gaps = 17/336 (5%)
 Frame = -3

Query: 1195 DKNILLLK*ARVCTLEDLDKILIEKEALQEDVNTLEMRLAETDARIKVAAQEKIHVXXXX 1016
            +KNILLL  AR+   EDL+KIL+EKEALQ ++N LE RLAETDARI VA QEKIHV    
Sbjct: 123  EKNILLLNEARIRACEDLEKILVEKEALQGEINVLETRLAETDARITVANQEKIHVEFLE 182

Query: 1015 XXXXXXXXXXXXKGVTEG-IDEKNIVSNKD---------NGSFNSLSKELRLLRKENMSL 866
                        KG TE    E + + N D         N S +SL++EL  LR EN SL
Sbjct: 183  GQLEKLRNELAQKGSTERKYAELHDLQNDDLSDANPLSHNVSIHSLTEELNSLRAENASL 242

Query: 865  KDDI*LLQEQLSNVNETDQRVIALESECVSLQATLKNLESRLVVAQVDLLKLSPLKLECK 686
            K+ I   + QLS+V   D+R++ALE E  SL++ LK+LES+L ++Q  + ++S L +ECK
Sbjct: 243  KNAIESFKTQLSDVKNNDERLVALEKERSSLESALKDLESKLSISQDGVSQISTLTVECK 302

Query: 685  DLWVKVGSLQELINKAAKQADEAISVLQQNHEFRKKVDSLEESLEEAKLHLSSSTK---- 518
            DLW KV +LQ L++KA KQAD+A+ VLQQN + R+KVD LE SLEEA ++  SS K    
Sbjct: 303  DLWDKVENLQSLLDKATKQADQAVLVLQQNQDLRRKVDKLEASLEEANIYKLSSDKLQKY 362

Query: 517  ---MQQKIRHLEESLQRSDEEIHSHVQLYQESVQEFQDVLNNLKEESKRKASDEPVIDMP 347
               MQQKI+ LE+ LQ+SDEEI+S+V LYQ+SV+EFQD L+ LK+ESK++  +EPV DMP
Sbjct: 363  NELMQQKIKLLEDRLQKSDEEINSYVWLYQQSVKEFQDTLDTLKKESKKRNLEEPVEDMP 422

Query: 346  WEFWSRILLMIDGWFLEKKISSNDAELLGEMAWKRD 239
            WEFWS++LL+IDGW LE KIS +DA LL E  WKRD
Sbjct: 423  WEFWSQLLLLIDGWTLENKISVDDASLLREKVWKRD 458



 Score =  104 bits (259), Expect(2) = e-109
 Identities = 53/87 (60%), Positives = 63/87 (72%)
 Frame = -1

Query: 261 EKWHGKETRIYDAYLACKKKNEIEIVATFLRLIASPTSQGLHIIHIAAEMAPVAKXXXXX 82
           EK   ++ RI D Y+ACKK+ E E ++ FL L++S TS GLH+IHIAAEMAPVAK     
Sbjct: 452 EKVWKRDRRISDTYIACKKQTEQEAISAFLGLLSSATSPGLHVIHIAAEMAPVAKVGGLG 511

Query: 81  XXXXXXGKALQKKGHLVEIVIPKYDCM 1
                 GKALQKKGHLVEIV+PKYDCM
Sbjct: 512 DVVSGLGKALQKKGHLVEIVLPKYDCM 538


>emb|CAA16796.1| starch synthase-like protein [Arabidopsis thaliana]
            gi|7268617|emb|CAB78826.1| starch synthase-like protein
            [Arabidopsis thaliana]
          Length = 1071

 Score =  321 bits (823), Expect(2) = e-102
 Identities = 168/326 (51%), Positives = 233/326 (71%), Gaps = 7/326 (2%)
 Frame = -3

Query: 1195 DKNILLLK*ARVCTLEDLDKILIEKEALQEDVNTLEMRLAETDARIKVAAQEKIHVXXXX 1016
            +KNIL L  AR   L+DL+KIL +KEALQ ++N LEM+L+ETD RIK AAQEK HV    
Sbjct: 196  EKNILRLDEARATALDDLNKILSDKEALQGEINVLEMKLSETDERIKTAAQEKAHVELLE 255

Query: 1015 XXXXXXXXXXXXKGVTEGIDEKNIVSNKDNGSFNSLSKELRLLRKENMSLKDDI*LLQEQ 836
                            E +  + I   + +G   +LSKEL  L+ EN+SL++DI +L+ +
Sbjct: 256  EQL-------------EKLRHEMISPIESDGYVLALSKELETLKLENLSLRNDIEMLKSE 302

Query: 835  LSNVNETDQRVIALESECVSLQATLKNLESRLVVAQVDLLKLSPLKLECKDLWVKVGSLQ 656
            L +V +T +RV+ LE EC  L++++K+LES+L V+Q D+ +LS LK+EC DLW KV +LQ
Sbjct: 303  LDSVKDTGERVVVLEKECSGLESSVKDLESKLSVSQEDVSQLSTLKIECTDLWAKVETLQ 362

Query: 655  ELINKAAKQADEAISVLQQNHEFRKKVDSLEESLEEAKLHLSSSTKMQQ-------KIRH 497
             L+++A KQA++A+ VLQQN + R KVD +EESL+EA ++  SS K+QQ       K+  
Sbjct: 363  LLLDRATKQAEQAVIVLQQNQDLRNKVDKIEESLKEANVYKESSEKIQQYNELMQHKVTL 422

Query: 496  LEESLQRSDEEIHSHVQLYQESVQEFQDVLNNLKEESKRKASDEPVIDMPWEFWSRILLM 317
            LEE L++SD EI S+VQLYQES++EFQ+ L +LKEESK+K+ DEPV DMPW++WSR+LL 
Sbjct: 423  LEERLEKSDAEIFSYVQLYQESIKEFQETLESLKEESKKKSRDEPVDDMPWDYWSRLLLT 482

Query: 316  IDGWFLEKKISSNDAELLGEMAWKRD 239
            +DGW LEKKI+SNDA+LL +M WK+D
Sbjct: 483  VDGWLLEKKIASNDADLLRDMVWKKD 508



 Score = 80.1 bits (196), Expect(2) = e-102
 Identities = 43/85 (50%), Positives = 55/85 (64%), Gaps = 3/85 (3%)
 Frame = -1

Query: 246 KETRIYDAYLACKKKNEIEIVATFLRLIASP---TSQGLHIIHIAAEMAPVAKXXXXXXX 76
           K+ RI+D Y+  K KNE+        L +S    +S GL+++HIAAEMAPVAK       
Sbjct: 507 KDRRIHDTYIDVKDKNELFKAFEKSNLFSSSCVDSSSGLYVVHIAAEMAPVAKVGGLGDV 566

Query: 75  XXXXGKALQKKGHLVEIVIPKYDCM 1
               GKALQ+KGHLVEI++PKYDCM
Sbjct: 567 VAGLGKALQRKGHLVEIILPKYDCM 591


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