BLASTX nr result

ID: Coptis25_contig00018693 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018693
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263121.1| PREDICTED: pathogen-related protein [Vitis v...    78   6e-13
emb|CAN77211.1| hypothetical protein VITISV_035026 [Vitis vinifera]    78   6e-13
ref|XP_002262980.1| PREDICTED: pathogen-related protein [Vitis v...    74   9e-12
ref|XP_003566352.1| PREDICTED: pathogen-related protein-like [Br...    71   1e-10
ref|XP_002306682.1| predicted protein [Populus trichocarpa] gi|2...    71   1e-10

>ref|XP_002263121.1| PREDICTED: pathogen-related protein [Vitis vinifera]
           gi|302142774|emb|CBI19977.3| unnamed protein product
           [Vitis vinifera]
          Length = 238

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 35/41 (85%), Positives = 37/41 (90%)
 Frame = +2

Query: 122 SVVVEGDKYRSYIWGEGEKNTVWRYGAPPNYDVVNKLFEEG 244
           S VVEGDKYRSY+ G+ EKNT WRYGAPPNYDVVNKLFEEG
Sbjct: 3   SSVVEGDKYRSYLSGDDEKNTEWRYGAPPNYDVVNKLFEEG 43


>emb|CAN77211.1| hypothetical protein VITISV_035026 [Vitis vinifera]
          Length = 485

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 35/41 (85%), Positives = 37/41 (90%)
 Frame = +2

Query: 122 SVVVEGDKYRSYIWGEGEKNTVWRYGAPPNYDVVNKLFEEG 244
           S VVEGDKYRSY+ G+ EKNT WRYGAPPNYDVVNKLFEEG
Sbjct: 250 SSVVEGDKYRSYLSGDDEKNTEWRYGAPPNYDVVNKLFEEG 290



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 30/41 (73%), Positives = 34/41 (82%)
 Frame = +2

Query: 122 SVVVEGDKYRSYIWGEGEKNTVWRYGAPPNYDVVNKLFEEG 244
           S V EGDKYR ++ GE E+NT WRYGAPPNY+VV KLFEEG
Sbjct: 3   SSVGEGDKYRYHLDGE-EENTEWRYGAPPNYEVVXKLFEEG 42


>ref|XP_002262980.1| PREDICTED: pathogen-related protein [Vitis vinifera]
          Length = 237

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 31/37 (83%), Positives = 35/37 (94%)
 Frame = +2

Query: 134 EGDKYRSYIWGEGEKNTVWRYGAPPNYDVVNKLFEEG 244
           +GDKYRSY++GEGE+NT WRYGA PNYDVVNKLFEEG
Sbjct: 7   QGDKYRSYLYGEGEENTEWRYGAAPNYDVVNKLFEEG 43


>ref|XP_003566352.1| PREDICTED: pathogen-related protein-like [Brachypodium distachyon]
          Length = 232

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 30/35 (85%), Positives = 33/35 (94%)
 Frame = +2

Query: 137 GDKYRSYIWGEGEKNTVWRYGAPPNYDVVNKLFEE 241
           GDKYRS++ GEGEKNTVWR GAPPNYD+VNKLFEE
Sbjct: 8   GDKYRSFLHGEGEKNTVWRLGAPPNYDMVNKLFEE 42


>ref|XP_002306682.1| predicted protein [Populus trichocarpa] gi|222856131|gb|EEE93678.1|
           predicted protein [Populus trichocarpa]
          Length = 238

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 28/38 (73%), Positives = 35/38 (92%)
 Frame = +2

Query: 131 VEGDKYRSYIWGEGEKNTVWRYGAPPNYDVVNKLFEEG 244
           V  DKYR++++GEGEKNT WR+G+PPNYD+VNKLFEEG
Sbjct: 6   VREDKYRTFLYGEGEKNTKWRFGSPPNYDIVNKLFEEG 43


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