BLASTX nr result

ID: Coptis25_contig00018685 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018685
         (889 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283008.2| PREDICTED: neurochondrin-like [Vitis vinifera]    283   3e-74
emb|CBI21102.3| unnamed protein product [Vitis vinifera]              283   3e-74
ref|XP_002515468.1| conserved hypothetical protein [Ricinus comm...   276   5e-72
ref|XP_003519041.1| PREDICTED: neurochondrin-like [Glycine max]       273   4e-71
ref|XP_003518905.1| PREDICTED: neurochondrin-like [Glycine max]       272   9e-71

>ref|XP_002283008.2| PREDICTED: neurochondrin-like [Vitis vinifera]
          Length = 629

 Score =  283 bits (725), Expect = 3e-74
 Identities = 141/239 (58%), Positives = 186/239 (77%)
 Frame = -3

Query: 887  LEFLQDAKEHGQRKGADLLASVRVVGSYLAESPFVCKEKVQDLLEYILSVEGEDESSPFY 708
            LE+LQDAK+HGQ+KG DLLASVR++GSYLAE+P  C+EKV++LLE++LS+EGEDE  PF+
Sbjct: 388  LEYLQDAKDHGQKKGDDLLASVRLIGSYLAETPLACREKVRELLEFMLSIEGEDEPRPFF 447

Query: 707  SVCFMLPLLCQITMETEGCRILASNKGLEPVTDCLVKLMDLNNLVVGEAFGTIFLACDTI 528
            S+CF+LP+LCQITME EGC+IL S  G + V +CL+KL+  N  ++ E  G IFLACDTI
Sbjct: 448  SICFLLPMLCQITMEIEGCKILVSCGGQKAVVECLIKLIGPNGCMI-EDKGCIFLACDTI 506

Query: 527  MNILLKKEEASVRLDGSSIVRLLTAFASCTDFITDPSFIMMASSICTLIFDSTSEEALLS 348
            +N+LLK+++   RLD S+ V LL A A  T+   +PS +MMASSIC LIFD TSE+ALL+
Sbjct: 507  LNLLLKRDQIKFRLDESTSVHLLKALAYWTEETDEPSIVMMASSICALIFDHTSEQALLN 566

Query: 347  HPDFKPSTLNSLARLIAKSLRTSGQDQMSDDAKTEGDLHQIITAGYTRWADRFPRIKEA 171
            HP+   ST+ SL++LI +SL T  Q+ M DD K++ DL  I+TAGY+RW+ RFP IK A
Sbjct: 567  HPNIDHSTIASLSQLIVRSLATCAQN-MGDDMKSDLDLLDIVTAGYSRWSHRFPHIKAA 624


>emb|CBI21102.3| unnamed protein product [Vitis vinifera]
          Length = 713

 Score =  283 bits (725), Expect = 3e-74
 Identities = 141/239 (58%), Positives = 186/239 (77%)
 Frame = -3

Query: 887  LEFLQDAKEHGQRKGADLLASVRVVGSYLAESPFVCKEKVQDLLEYILSVEGEDESSPFY 708
            LE+LQDAK+HGQ+KG DLLASVR++GSYLAE+P  C+EKV++LLE++LS+EGEDE  PF+
Sbjct: 472  LEYLQDAKDHGQKKGDDLLASVRLIGSYLAETPLACREKVRELLEFMLSIEGEDEPRPFF 531

Query: 707  SVCFMLPLLCQITMETEGCRILASNKGLEPVTDCLVKLMDLNNLVVGEAFGTIFLACDTI 528
            S+CF+LP+LCQITME EGC+IL S  G + V +CL+KL+  N  ++ E  G IFLACDTI
Sbjct: 532  SICFLLPMLCQITMEIEGCKILVSCGGQKAVVECLIKLIGPNGCMI-EDKGCIFLACDTI 590

Query: 527  MNILLKKEEASVRLDGSSIVRLLTAFASCTDFITDPSFIMMASSICTLIFDSTSEEALLS 348
            +N+LLK+++   RLD S+ V LL A A  T+   +PS +MMASSIC LIFD TSE+ALL+
Sbjct: 591  LNLLLKRDQIKFRLDESTSVHLLKALAYWTEETDEPSIVMMASSICALIFDHTSEQALLN 650

Query: 347  HPDFKPSTLNSLARLIAKSLRTSGQDQMSDDAKTEGDLHQIITAGYTRWADRFPRIKEA 171
            HP+   ST+ SL++LI +SL T  Q+ M DD K++ DL  I+TAGY+RW+ RFP IK A
Sbjct: 651  HPNIDHSTIASLSQLIVRSLATCAQN-MGDDMKSDLDLLDIVTAGYSRWSHRFPHIKAA 708


>ref|XP_002515468.1| conserved hypothetical protein [Ricinus communis]
            gi|223545412|gb|EEF46917.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 631

 Score =  276 bits (706), Expect = 5e-72
 Identities = 139/241 (57%), Positives = 183/241 (75%)
 Frame = -3

Query: 887  LEFLQDAKEHGQRKGADLLASVRVVGSYLAESPFVCKEKVQDLLEYILSVEGEDESSPFY 708
            LE+L DAKEHGQ+KG+DLLASVRVVGSYLAE+P  CK+KV++LL Y+LS+E EDE SPFY
Sbjct: 391  LEYLHDAKEHGQKKGSDLLASVRVVGSYLAETPDACKDKVRELLGYMLSIEAEDELSPFY 450

Query: 707  SVCFMLPLLCQITMETEGCRILASNKGLEPVTDCLVKLMDLNNLVVGEAFGTIFLACDTI 528
            S+CF+LP+LCQITME EGC+ L S+ G + V +CL+K++   +  + EA  +IFLACDTI
Sbjct: 451  SICFLLPMLCQITMEVEGCKALVSSGGYKAVVECLIKMISSIHYTI-EANSSIFLACDTI 509

Query: 527  MNILLKKEEASVRLDGSSIVRLLTAFASCTDFITDPSFIMMASSICTLIFDSTSEEALLS 348
            +N+L+K+E+    +D S ++ LL A     +   DPS +MMASSIC LIFD TSE+ALL 
Sbjct: 510  LNLLVKREQMQFSVDESIVIDLLMALGYWGEDADDPSVLMMASSICALIFDYTSEQALLC 569

Query: 347  HPDFKPSTLNSLARLIAKSLRTSGQDQMSDDAKTEGDLHQIITAGYTRWADRFPRIKEAA 168
            HP F  S+L SL+R+IAKSL    QD MSD  K E DL +I+++G++RW+ RFPRI EA 
Sbjct: 570  HPKFNSSSLESLSRIIAKSLALLKQD-MSDVVKAEMDLLEIVSSGFSRWSHRFPRISEAV 628

Query: 167  R 165
            +
Sbjct: 629  Q 629


>ref|XP_003519041.1| PREDICTED: neurochondrin-like [Glycine max]
          Length = 621

 Score =  273 bits (698), Expect = 4e-71
 Identities = 142/242 (58%), Positives = 184/242 (76%)
 Frame = -3

Query: 887  LEFLQDAKEHGQRKGADLLASVRVVGSYLAESPFVCKEKVQDLLEYILSVEGEDESSPFY 708
            LE+L+DAKEHGQ+KG DLLASVR++GSYLAE+P  CKEKVQDLL Y+LS+EGEDE  PFY
Sbjct: 386  LEYLEDAKEHGQKKGDDLLASVRIIGSYLAEAPVACKEKVQDLLGYMLSLEGEDEQRPFY 445

Query: 707  SVCFMLPLLCQITMETEGCRILASNKGLEPVTDCLVKLMDLNNLVVGEAFGTIFLACDTI 528
            +VCF+LP+L QITME EGC+ LAS KGLE V DC  KL+  +  +V E  G IF+ACDTI
Sbjct: 446  AVCFLLPMLSQITMEIEGCKALASCKGLEAVLDCFSKLVGSHAFLV-EDNGCIFMACDTI 504

Query: 527  MNILLKKEEASVRLDGSSIVRLLTAFASCTDFITDPSFIMMASSICTLIFDSTSEEALLS 348
            MN+LLKK++  ++LD S+IV LL   A  ++   + S +MMASSICTLIFD TSEEALL+
Sbjct: 505  MNLLLKKDKVQIKLDVSAIVDLLKVLAHWSENTDEMSSMMMASSICTLIFDYTSEEALLN 564

Query: 347  HPDFKPSTLNSLARLIAKSLRTSGQDQMSDDAKTEGDLHQIITAGYTRWADRFPRIKEAA 168
             PDF   TL+SL  LIA+ L +S Q     D K + DL +I+++G++RWA R+P I++A 
Sbjct: 565  CPDFDYRTLSSLYLLIARCLASSEQ-----DTKVDMDLSEIVSSGFSRWAHRYPHIRDAV 619

Query: 167  RD 162
            ++
Sbjct: 620  KN 621


>ref|XP_003518905.1| PREDICTED: neurochondrin-like [Glycine max]
          Length = 616

 Score =  272 bits (695), Expect = 9e-71
 Identities = 143/242 (59%), Positives = 183/242 (75%)
 Frame = -3

Query: 887  LEFLQDAKEHGQRKGADLLASVRVVGSYLAESPFVCKEKVQDLLEYILSVEGEDESSPFY 708
            LE+L+DAKEHGQ+KG DLLASVR++GSYLAE+P  CKEKVQDLL Y+LS+EGEDE  PFY
Sbjct: 381  LEYLEDAKEHGQKKGDDLLASVRIIGSYLAEAPVACKEKVQDLLGYMLSLEGEDEQRPFY 440

Query: 707  SVCFMLPLLCQITMETEGCRILASNKGLEPVTDCLVKLMDLNNLVVGEAFGTIFLACDTI 528
            +VCF+LP+L QITME EGC+ LAS KGLE V DC  KL+  +  +V E  G IF+ACDTI
Sbjct: 441  AVCFLLPMLSQITMEIEGCKALASCKGLEAVLDCFSKLVGSHAFLV-EDNGCIFMACDTI 499

Query: 527  MNILLKKEEASVRLDGSSIVRLLTAFASCTDFITDPSFIMMASSICTLIFDSTSEEALLS 348
            MN+LLKK++  + LD S+IV LL A A  ++   + S +MMASSICTLIFD TSEEALL+
Sbjct: 500  MNLLLKKDKVQIMLDVSAIVDLLKALAHWSENTDEMSSMMMASSICTLIFDYTSEEALLN 559

Query: 347  HPDFKPSTLNSLARLIAKSLRTSGQDQMSDDAKTEGDLHQIITAGYTRWADRFPRIKEAA 168
             PDF   TL+SL  LIA+ L +S Q     D K   DL +I+++G++RWA R+P I++A 
Sbjct: 560  CPDFDYRTLSSLYLLIARCLASSEQ-----DTKAYMDLSEIVSSGFSRWAHRYPHIRDAV 614

Query: 167  RD 162
            ++
Sbjct: 615  KN 616


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