BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018684
         (228 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276824.2| PREDICTED: FACT complex subunit SPT16-like [...   107   1e-21
ref|XP_002512565.1| FACT complex subunit SPT16, putative [Ricinu...   107   1e-21
emb|CAN64799.1| hypothetical protein VITISV_017318 [Vitis vinifera]   107   1e-21
ref|XP_004158653.1| PREDICTED: LOW QUALITY PROTEIN: FACT complex...   106   2e-21
ref|XP_004134563.1| PREDICTED: FACT complex subunit SPT16-like [...   106   2e-21

>ref|XP_002276824.2| PREDICTED: FACT complex subunit SPT16-like [Vitis vinifera]
          Length = 1071

 Score =  107 bits (266), Expect = 1e-21
 Identities = 52/75 (69%), Positives = 57/75 (76%)
 Frame = -3

Query: 226 GARRSTNXXXXXXXXXXXXXRKNRINMDFQVFVNKVNDLWGQPQFRALDLEFDQPLRELG 47
           G +RS               RKN+INMDFQ FVN+VNDLWGQPQF+ LDLEFDQPLRELG
Sbjct: 775 GGKRSAYDPDEIEEEQRERDRKNKINMDFQNFVNRVNDLWGQPQFKGLDLEFDQPLRELG 834

Query: 46  FHGVPYKASAFIVPT 2
           FHGVP+KASAFIVPT
Sbjct: 835 FHGVPHKASAFIVPT 849


>ref|XP_002512565.1| FACT complex subunit SPT16, putative [Ricinus communis]
           gi|223548526|gb|EEF50017.1| FACT complex subunit SPT16,
           putative [Ricinus communis]
          Length = 1098

 Score =  107 bits (266), Expect = 1e-21
 Identities = 52/75 (69%), Positives = 57/75 (76%)
 Frame = -3

Query: 226 GARRSTNXXXXXXXXXXXXXRKNRINMDFQVFVNKVNDLWGQPQFRALDLEFDQPLRELG 47
           G +RS               RKN+INMDFQ FVN+VND+WGQPQFR LDLEFDQPLRELG
Sbjct: 772 GGKRSAYDPDEIEEEQRERDRKNKINMDFQNFVNRVNDVWGQPQFRGLDLEFDQPLRELG 831

Query: 46  FHGVPYKASAFIVPT 2
           FHGVP+KASAFIVPT
Sbjct: 832 FHGVPHKASAFIVPT 846


>emb|CAN64799.1| hypothetical protein VITISV_017318 [Vitis vinifera]
          Length = 1019

 Score =  107 bits (266), Expect = 1e-21
 Identities = 52/75 (69%), Positives = 57/75 (76%)
 Frame = -3

Query: 226 GARRSTNXXXXXXXXXXXXXRKNRINMDFQVFVNKVNDLWGQPQFRALDLEFDQPLRELG 47
           G +RS               RKN+INMDFQ FVN+VNDLWGQPQF+ LDLEFDQPLRELG
Sbjct: 723 GGKRSAYDPDEIEEEQRERDRKNKINMDFQNFVNRVNDLWGQPQFKGLDLEFDQPLRELG 782

Query: 46  FHGVPYKASAFIVPT 2
           FHGVP+KASAFIVPT
Sbjct: 783 FHGVPHKASAFIVPT 797


>ref|XP_004158653.1| PREDICTED: LOW QUALITY PROTEIN: FACT complex subunit SPT16-like
            [Cucumis sativus]
          Length = 1073

 Score =  106 bits (265), Expect = 2e-21
 Identities = 52/75 (69%), Positives = 56/75 (74%)
 Frame = -3

Query: 226  GARRSTNXXXXXXXXXXXXXRKNRINMDFQVFVNKVNDLWGQPQFRALDLEFDQPLRELG 47
            G +RS               RKN+INMDFQ FVN+VNDLWGQPQF  LDLEFDQPLRELG
Sbjct: 781  GGKRSAYDPDEIEEEQRERDRKNKINMDFQSFVNRVNDLWGQPQFGGLDLEFDQPLRELG 840

Query: 46   FHGVPYKASAFIVPT 2
            FHGVPYK+SAFIVPT
Sbjct: 841  FHGVPYKSSAFIVPT 855


>ref|XP_004134563.1| PREDICTED: FACT complex subunit SPT16-like [Cucumis sativus]
          Length = 1073

 Score =  106 bits (265), Expect = 2e-21
 Identities = 52/75 (69%), Positives = 56/75 (74%)
 Frame = -3

Query: 226  GARRSTNXXXXXXXXXXXXXRKNRINMDFQVFVNKVNDLWGQPQFRALDLEFDQPLRELG 47
            G +RS               RKN+INMDFQ FVN+VNDLWGQPQF  LDLEFDQPLRELG
Sbjct: 781  GGKRSAYDPDEIEEEQRERDRKNKINMDFQSFVNRVNDLWGQPQFGGLDLEFDQPLRELG 840

Query: 46   FHGVPYKASAFIVPT 2
            FHGVPYK+SAFIVPT
Sbjct: 841  FHGVPYKSSAFIVPT 855