BLASTX nr result

ID: Coptis25_contig00018674 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018674
         (228 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318903.1| cc-nbs-lrr resistance protein [Populus trich...    79   4e-13
ref|XP_002318909.1| cc-nbs-lrr resistance protein [Populus trich...    77   1e-12
ref|XP_003522004.1| PREDICTED: putative disease resistance RPP13...    76   3e-12
ref|XP_002318907.1| cc-nbs-lrr resistance protein [Populus trich...    76   3e-12
ref|XP_002318904.1| nbs-lrr resistance protein [Populus trichoca...    76   3e-12

>ref|XP_002318903.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222859576|gb|EEE97123.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 906

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 39/75 (52%), Positives = 51/75 (68%)
 Frame = +3

Query: 3   SIVGTGGFGKTTLAQLVYNEGTIASTYELKIWVCVSEPFDLERVAREIIEQATGGKPPNV 182
           S+VG GG GKTTLAQL +N+  + + +E KIWVCVSEPFD  R+A+ IIEQ   G P N+
Sbjct: 180 SLVGLGGMGKTTLAQLAFNDAEVTAHFEKKIWVCVSEPFDEVRIAKAIIEQLE-GSPTNL 238

Query: 183 AGWELLHQHLCNSVK 227
              + L Q +  S+K
Sbjct: 239 VELQSLLQRVSESIK 253


>ref|XP_002318909.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222859582|gb|EEE97129.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 746

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 37/75 (49%), Positives = 52/75 (69%)
 Frame = +3

Query: 3   SIVGTGGFGKTTLAQLVYNEGTIASTYELKIWVCVSEPFDLERVAREIIEQATGGKPPNV 182
           S+VG GG GKTTLAQL +N+  + + +E KIWVCVSEPFD  R+A+ I+EQ   G+ P++
Sbjct: 201 SLVGLGGIGKTTLAQLAFNDAEVTTHFEKKIWVCVSEPFDQVRIAKAILEQLE-GRAPDL 259

Query: 183 AGWELLHQHLCNSVK 227
              + L Q +  S+K
Sbjct: 260 VELQSLLQRVSESIK 274


>ref|XP_003522004.1| PREDICTED: putative disease resistance RPP13-like protein 1-like
           [Glycine max]
          Length = 1225

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 38/74 (51%), Positives = 49/74 (66%)
 Frame = +3

Query: 6   IVGTGGFGKTTLAQLVYNEGTIASTYELKIWVCVSEPFDLERVAREIIEQATGGKPPNVA 185
           IVG GG GKTTLAQLVYN+  +   ++ K WVCVS+ FD+ +V + IIE  T GKP N+ 
Sbjct: 186 IVGMGGVGKTTLAQLVYNDENLEEIFDFKAWVCVSQEFDILKVTKAIIEAVT-GKPCNLN 244

Query: 186 GWELLHQHLCNSVK 227
              LLH  L + +K
Sbjct: 245 DLNLLHLELMDKLK 258


>ref|XP_002318907.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222859580|gb|EEE97127.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 945

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 37/74 (50%), Positives = 51/74 (68%)
 Frame = +3

Query: 3   SIVGTGGFGKTTLAQLVYNEGTIASTYELKIWVCVSEPFDLERVAREIIEQATGGKPPNV 182
           S+VG GG GKTTLAQL +N+  + + +E KIWVCVSEPFD  R+A+ I+EQ   G+P N+
Sbjct: 201 SLVGLGGIGKTTLAQLAFNDSEVTAHFEKKIWVCVSEPFDEIRIAKAILEQLE-GRPTNL 259

Query: 183 AGWELLHQHLCNSV 224
              + L Q +  S+
Sbjct: 260 VELQSLLQGVSESI 273


>ref|XP_002318904.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222859577|gb|EEE97124.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 799

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 36/75 (48%), Positives = 51/75 (68%)
 Frame = +3

Query: 3   SIVGTGGFGKTTLAQLVYNEGTIASTYELKIWVCVSEPFDLERVAREIIEQATGGKPPNV 182
           S+VG GG GKTTLAQL +N+  + + +E KIWVCVS+PFD  ++A+ I+EQ   G  PN+
Sbjct: 110 SLVGLGGIGKTTLAQLAFNDSEVTAHFEKKIWVCVSDPFDEVKIAKAILEQLE-GSAPNL 168

Query: 183 AGWELLHQHLCNSVK 227
              + L Q +  S+K
Sbjct: 169 VELQSLLQRVSESIK 183


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