BLASTX nr result

ID: Coptis25_contig00018665 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018665
         (1425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22976.3| unnamed protein product [Vitis vinifera]              337   6e-90
emb|CAN74321.1| hypothetical protein VITISV_008594 [Vitis vinifera]   334   3e-89
ref|XP_002336041.1| predicted protein [Populus trichocarpa] gi|2...   318   3e-84
ref|XP_003611996.1| hypothetical protein MTR_5g020150 [Medicago ...   308   2e-81
ref|XP_002529761.1| conserved hypothetical protein [Ricinus comm...   306   9e-81

>emb|CBI22976.3| unnamed protein product [Vitis vinifera]
          Length = 1161

 Score =  337 bits (863), Expect = 6e-90
 Identities = 165/297 (55%), Positives = 223/297 (75%), Gaps = 1/297 (0%)
 Frame = +2

Query: 2    NGNFSGEDEMKVSTSNKNGVRDTDIPISVEPINDPPFVNVSEYIILGKADKDGSRIFDRQ 181
            N NF G+D ++VST N+NG+   ++P+ VEPINDPPF++V E+IIL  + +DGS IFDR+
Sbjct: 817  NENFCGDDAIQVSTMNRNGINYLNVPVFVEPINDPPFIHVPEFIILKNSKEDGSLIFDRE 876

Query: 182  KSRSEFFIGDPDFSSYQGNKSYFMISLSMEVSDGTLVTSLLDYQINTTEVKLENSYQWQP 361
            + + EFFIGDPD     G +S F++  S+EV+ G+LV +L    INTTE+KL+NSYQWQ 
Sbjct: 877  QDKFEFFIGDPDLLYVPGGESLFVVMFSVEVNSGSLVVNLPAELINTTELKLKNSYQWQT 936

Query: 362  LQTYVTLSRHFLVKAKGIRFPGTIKDCNEAMEQLLYQGGERGAVLTLIVNDMGNHGCYPD 541
            LQT+VT+S+HF+VKAKGIRF GT+ DCN  M+QL+YQGGE GAVLT+ +NDMGN+G  PD
Sbjct: 937  LQTFVTISKHFMVKAKGIRFRGTVNDCNYVMQQLIYQGGEHGAVLTVTLNDMGNYGGCPD 996

Query: 542  CSESMTAPLQMEATVNLVRRSPMNPLLARTLGSAVVIEFILISLLGALVLFFICKCAFVL 721
             +E ++ PL  EA+VNL+RRSPM+ L+A TLGSA+V+EF+++  LG L+LFF C+CA VL
Sbjct: 997  SAEKISMPLFTEASVNLIRRSPMSSLVAHTLGSAIVVEFVVVFFLGVLLLFFTCRCAIVL 1056

Query: 722  GNERRSF-TRDSKISKVEKSKDPSSSDQPLSEDVTHFSGCCSSPFLLRSQLSIFRQR 889
             NERRS   ++ ++SKV     P+ +   LS DVT+F+GCC S  LL  + S F QR
Sbjct: 1057 INERRSCDVKNIRLSKVSSLHKPTPNTD-LSTDVTYFTGCCPSRLLLTGRPSDFHQR 1112


>emb|CAN74321.1| hypothetical protein VITISV_008594 [Vitis vinifera]
          Length = 1176

 Score =  334 bits (857), Expect = 3e-89
 Identities = 164/297 (55%), Positives = 222/297 (74%), Gaps = 1/297 (0%)
 Frame = +2

Query: 2    NGNFSGEDEMKVSTSNKNGVRDTDIPISVEPINDPPFVNVSEYIILGKADKDGSRIFDRQ 181
            N NF G+D ++VST N+NG+   ++P+ VEPINDPPF++V E+IIL  + +DGS IFDR+
Sbjct: 832  NENFCGDDAIQVSTMNRNGINYLNVPVFVEPINDPPFIHVPEFIILKNSKEDGSLIFDRE 891

Query: 182  KSRSEFFIGDPDFSSYQGNKSYFMISLSMEVSDGTLVTSLLDYQINTTEVKLENSYQWQP 361
            + + EFFIGDPD     G +S F++  S+EV+ G+LV +L    INTTE+KL+NSYQWQ 
Sbjct: 892  QDKFEFFIGDPDLLYVPGGESLFVVMFSVEVNSGSLVVNLPAELINTTELKLKNSYQWQT 951

Query: 362  LQTYVTLSRHFLVKAKGIRFPGTIKDCNEAMEQLLYQGGERGAVLTLIVNDMGNHGCYPD 541
            LQT+VT+S+HF+VKAKGIRF GT+ DCN  M+QL+YQGGE GAVLT+ +NDMGN+G  PD
Sbjct: 952  LQTFVTISKHFMVKAKGIRFRGTVNDCNYVMQQLIYQGGEHGAVLTVTLNDMGNYGGCPD 1011

Query: 542  CSESMTAPLQMEATVNLVRRSPMNPLLARTLGSAVVIEFILISLLGALVLFFICKCAFVL 721
             +E ++ PL  EA+VNL+RRSPM+ L+A TLGSA+V+EF+++  LG L+LFF C+CA VL
Sbjct: 1012 SAEKISMPLFTEASVNLIRRSPMSSLVAHTLGSAIVVEFVVVFFLGVLLLFFTCRCAIVL 1071

Query: 722  GNERRS-FTRDSKISKVEKSKDPSSSDQPLSEDVTHFSGCCSSPFLLRSQLSIFRQR 889
             NERRS   ++ ++SKV     P+ +   LS D T+F+GCC S  LL  + S F QR
Sbjct: 1072 INERRSRDIKNIRLSKVSSLHKPTPNTD-LSTDATYFTGCCPSRLLLTGRPSNFHQR 1127


>ref|XP_002336041.1| predicted protein [Populus trichocarpa] gi|222839764|gb|EEE78087.1|
            predicted protein [Populus trichocarpa]
          Length = 1174

 Score =  318 bits (814), Expect = 3e-84
 Identities = 154/300 (51%), Positives = 216/300 (72%), Gaps = 1/300 (0%)
 Frame = +2

Query: 8    NFSGEDEMKVSTSNKNGVRDTDIPISVEPINDPPFVNVSEYIILGKADKDGSRIFDRQKS 187
            NF G+D + VS SNKNG  D D+P+SVEP+NDPP + + ++IIL K+++D S IFD+   
Sbjct: 840  NFYGDDAIHVSASNKNGKNDMDVPVSVEPVNDPPVIKIPKFIIL-KSNEDESLIFDKAID 898

Query: 188  RSEFFIGDPDFSSYQGNKSYFMISLSMEVSDGTLVTSLLDYQINTTEVKLENSYQWQPLQ 367
            + EF +GDPD   Y GN+S F+++ S+EV  G LVTSL    + TTE+K+ +SYQWQP+Q
Sbjct: 899  KFEFSVGDPDLLGYPGNESGFIVTFSVEVDKGVLVTSLAAELLKTTELKVMSSYQWQPIQ 958

Query: 368  TYVTLSRHFLVKAKGIRFPGTIKDCNEAMEQLLYQGGERGAVLTLIVNDMGNHGCYPDCS 547
            TYV++SRHF+V+A G+RF G + +CN  M+QL Y G E  A+LT+ +NDMG++GC  DC+
Sbjct: 959  TYVSISRHFMVRANGVRFRGPLNECNSVMQQLSYDGRESDAILTVKLNDMGHYGCSSDCT 1018

Query: 548  ESMTAPLQMEATVNLVRRSPMNPLLARTLGSAVVIEFILISLLGALVLFFICKCAFVLGN 727
            + +  PL  EATV L+RR  M+ LLA TLGSA+++EF+++  LG ++LFF CKCA  L N
Sbjct: 1019 DKIAVPLHAEATVQLIRRRSMSSLLAHTLGSAILVEFLMVFSLGGILLFFTCKCAMHLAN 1078

Query: 728  ERRSFT-RDSKISKVEKSKDPSSSDQPLSEDVTHFSGCCSSPFLLRSQLSIFRQRCLQRL 904
            ERR  + ++S++S V+ S+  S      S+D+T+F+ CCSSPFLL  Q S FRQR  QRL
Sbjct: 1079 ERRRISVKNSQLSSVQNSQKKSQYTD-FSKDMTNFTCCCSSPFLLSGQTSNFRQRSNQRL 1137


>ref|XP_003611996.1| hypothetical protein MTR_5g020150 [Medicago truncatula]
            gi|355513331|gb|AES94954.1| hypothetical protein
            MTR_5g020150 [Medicago truncatula]
          Length = 472

 Score =  308 bits (790), Expect = 2e-81
 Identities = 147/298 (49%), Positives = 208/298 (69%), Gaps = 2/298 (0%)
 Frame = +2

Query: 2    NGNFSGEDEMKVSTSNKNGVRDTDIPISVEPINDPPFVNVSEYIILGKADKDGSRIFDRQ 181
            N NF G D ++VS  NKNGV    +PI V+PIND P++ +  +IIL ++++D   IFD+ 
Sbjct: 159  NENFYGADTIQVSAKNKNGVNSLGVPIFVDPINDLPYIRIPYFIIL-RSNEDERLIFDKD 217

Query: 182  KSRSEFFIGDPDFSSYQGNKSYFMISLSMEVSDGTLVTSLLDYQINTTEVKLENSYQWQP 361
            K + +F++GDPD  ++ G +++F+++ SMEV+DG L T+L  + INTTE+K  N++QWQP
Sbjct: 218  KDKFDFYVGDPDLLTFPGGEAHFLVTFSMEVNDGLLETNLPSHLINTTELKHMNNFQWQP 277

Query: 362  LQTYVTLSRHFLVKAKGIRFPGTIKDCNEAMEQLLYQGGERGAVLTLIVNDMGNHGCYPD 541
            LQTYVT+S+HF+VKA GIRF  T+ DCN  M+QL Y G E GA LTL +NDMGN+GCYPD
Sbjct: 278  LQTYVTISKHFMVKASGIRFQATVNDCNTVMQQLYYHGDEHGATLTLTLNDMGNYGCYPD 337

Query: 542  CSESMTAPLQMEATVNLVRRSPMNPLLARTLGSAVVIEFILISLLGALVLFFICKCAFVL 721
            C E M+  L  EA VNL+R+ PM+  LA TLG+ +VIEF++I  LG L+L+F CKCA +L
Sbjct: 338  CEEGMSMQLYTEAIVNLMRKQPMDSFLAHTLGTIIVIEFVIIFCLGLLLLYFTCKCAILL 397

Query: 722  GNERRSFTRDSKISKVEKSKDPSSSDQPLSEDVTHFSGCC--SSPFLLRSQLSIFRQR 889
             +ERR   + +  +  ++S +  +S   + E+ T+F+GCC  SS    R Q   FRQR
Sbjct: 398  VHERRKNEKRTSEASTDQSSEGQTSSMTIPENATNFTGCCWISSLLRFRMQSFNFRQR 455


>ref|XP_002529761.1| conserved hypothetical protein [Ricinus communis]
            gi|223530759|gb|EEF32627.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1059

 Score =  306 bits (784), Expect = 9e-81
 Identities = 148/246 (60%), Positives = 189/246 (76%)
 Frame = +2

Query: 2    NGNFSGEDEMKVSTSNKNGVRDTDIPISVEPINDPPFVNVSEYIILGKADKDGSRIFDRQ 181
            N NFSG+D ++VS SN NG  D DIP+ VEPINDPPF+N+ ++IIL   D D S IFD+ 
Sbjct: 782  NDNFSGDDIVRVSASNTNGKTDVDIPVFVEPINDPPFINIPKFIILN-GDGDESLIFDKA 840

Query: 182  KSRSEFFIGDPDFSSYQGNKSYFMISLSMEVSDGTLVTSLLDYQINTTEVKLENSYQWQP 361
            + + EF IGDPD  ++ G++S+F+++ S+EV DG LVTSL    INTTE+KL NSYQWQP
Sbjct: 841  RDKFEFCIGDPDSLNFPGSESHFIVTFSVEVDDGFLVTSLSAELINTTELKLMNSYQWQP 900

Query: 362  LQTYVTLSRHFLVKAKGIRFPGTIKDCNEAMEQLLYQGGERGAVLTLIVNDMGNHGCYPD 541
            LQTYV +S+HF+VKA GIRF G I DCN  M+QL Y GGE GAVLT+ VNDMG++GCY D
Sbjct: 901  LQTYVAISKHFMVKANGIRFRGNINDCNFVMQQLSYHGGENGAVLTVKVNDMGHYGCYSD 960

Query: 542  CSESMTAPLQMEATVNLVRRSPMNPLLARTLGSAVVIEFILISLLGALVLFFICKCAFVL 721
            C+E ++ PL  EATVNL+ RSPM+ L A TLGSAV++EF+++  LG ++LFF CKCA +L
Sbjct: 961  CTERISMPLHAEATVNLIWRSPMSSLAAHTLGSAVILEFLVVLSLGVILLFFTCKCAILL 1020

Query: 722  GNERRS 739
             NER S
Sbjct: 1021 TNERCS 1026


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