BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018663
         (1118 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004152101.1| PREDICTED: 15-cis-zeta-carotene isomerase, c...   405   e-110
ref|XP_002267391.1| PREDICTED: 15-cis-zeta-carotene isomerase, c...   394   e-107
emb|CBI39443.3| unnamed protein product [Vitis vinifera]              391   e-106
ref|XP_002519613.1| conserved hypothetical protein [Ricinus comm...   390   e-106
ref|XP_003553105.1| PREDICTED: uncharacterized protein LOC100820...   389   e-106

>ref|XP_004152101.1| PREDICTED: 15-cis-zeta-carotene isomerase, chloroplastic-like
           [Cucumis sativus] gi|449521697|ref|XP_004167866.1|
           PREDICTED: 15-cis-zeta-carotene isomerase,
           chloroplastic-like [Cucumis sativus]
          Length = 372

 Score =  405 bits (1041), Expect = e-110
 Identities = 205/297 (69%), Positives = 245/297 (82%), Gaps = 4/297 (1%)
 Frame = -3

Query: 879 RSNFLSFHKPFK----NPVFKTPLNRNINKPFKFQRVLSRILARTSLEETEGKSSVVVDE 712
           R + +SF +PF     N + + PL+ N    F+  R+++   A     E+ G +SV  DE
Sbjct: 24  RPDAISF-RPFSISTPNCLQQLPLSLNSFHIFRRPRLVAE--ASIGDRESGGSTSVSDDE 80

Query: 711 FQLGEDSAFFDIFQQKVSSWVYFTGILGVVLFALDALWIDSSFGFGWGKAFIDSLSGISD 532
             +GED+A FD+ +QK++SWVYFT ILGVVLF L+ +WID+S G G GKAF+D++SGISD
Sbjct: 81  GFVGEDAAAFDLSEQKLTSWVYFTVILGVVLFVLNVVWIDNSAG-GVGKAFLDAVSGISD 139

Query: 531 SHEIVMLILVFIFAAVHSGMASLRDPGEKLIGARAYRVLFAGISLPLAVSTVVYFINHRY 352
           SHE+VML+L+FIFA VHSG+ASLRD GEKL+G RA+RVLFAG+SLPLAVSTVVYFINHRY
Sbjct: 140 SHEVVMLLLIFIFAIVHSGLASLRDQGEKLVGERAFRVLFAGVSLPLAVSTVVYFINHRY 199

Query: 351 DGVQLWQLQSVPWLHEVFWISNFISFLFLYPSTFNLLEVAAVDEPKMHLWETGIMRITRH 172
           DGVQLWQLQSVP LH++ W+S+F+SF+FLYPSTFNLLEVAAVD+PKMHLWETGI+RITRH
Sbjct: 200 DGVQLWQLQSVPLLHQLVWLSSFVSFIFLYPSTFNLLEVAAVDKPKMHLWETGIIRITRH 259

Query: 171 PQMVGQVIWCLAHAMWIGNSVAVAASFGLIGHHLFGVWNGDRRLGLRYGEAFEVVKS 1
           PQMVGQVIWCLAH +WIGNSVAVAAS GLIGHHLFGVWNGDRRL  RYG  FE VKS
Sbjct: 260 PQMVGQVIWCLAHTIWIGNSVAVAASIGLIGHHLFGVWNGDRRLAKRYGADFEAVKS 316


>ref|XP_002267391.1| PREDICTED: 15-cis-zeta-carotene isomerase, chloroplastic-like
           [Vitis vinifera]
          Length = 365

 Score =  394 bits (1012), Expect = e-107
 Identities = 192/261 (73%), Positives = 222/261 (85%)
 Frame = -3

Query: 786 RVLSRILARTSLEETEGKSSVVVDEFQLGEDSAFFDIFQQKVSSWVYFTGILGVVLFALD 607
           R   +I+A TS+ ETE +    V+   +GEDSA FD+ QQK+SSW+YF GILGVVLF LD
Sbjct: 53  RFCHKIMAGTSIGETEEEG---VEPVTVGEDSAAFDLGQQKISSWIYFGGILGVVLFLLD 109

Query: 606 ALWIDSSFGFGWGKAFIDSLSGISDSHEIVMLILVFIFAAVHSGMASLRDPGEKLIGARA 427
            +WID+S GFG  K FI +++G+S+SHE+VMLIL  IFA  HSG+ASLRD GEKLIG RA
Sbjct: 110 VVWIDNSTGFG--KDFIAAVAGVSESHEVVMLILTLIFAIGHSGLASLRDSGEKLIGERA 167

Query: 426 YRVLFAGISLPLAVSTVVYFINHRYDGVQLWQLQSVPWLHEVFWISNFISFLFLYPSTFN 247
           +RVLFAG SLPLAVSTVVYFINHRYDG+QLWQLQSVP +H++ W S+F+SF FLYPSTFN
Sbjct: 168 FRVLFAGTSLPLAVSTVVYFINHRYDGLQLWQLQSVPGIHQLVWFSSFVSFFFLYPSTFN 227

Query: 246 LLEVAAVDEPKMHLWETGIMRITRHPQMVGQVIWCLAHAMWIGNSVAVAASFGLIGHHLF 67
           LLEVAAVD+PKMHLWETGIMRITRHPQMVGQVIWC+AH +WIGNSVAVAAS GLIGHHLF
Sbjct: 228 LLEVAAVDKPKMHLWETGIMRITRHPQMVGQVIWCIAHTVWIGNSVAVAASIGLIGHHLF 287

Query: 66  GVWNGDRRLGLRYGEAFEVVK 4
           GVWNGDRRL  RYGEAF+ V+
Sbjct: 288 GVWNGDRRLASRYGEAFDTVQ 308


>emb|CBI39443.3| unnamed protein product [Vitis vinifera]
          Length = 307

 Score =  391 bits (1004), Expect = e-106
 Identities = 190/255 (74%), Positives = 219/255 (85%)
 Frame = -3

Query: 768 LARTSLEETEGKSSVVVDEFQLGEDSAFFDIFQQKVSSWVYFTGILGVVLFALDALWIDS 589
           +A TS+ ETE +    V+   +GEDSA FD+ QQK+SSW+YF GILGVVLF LD +WID+
Sbjct: 1   MAGTSIGETEEEG---VEPVTVGEDSAAFDLGQQKISSWIYFGGILGVVLFLLDVVWIDN 57

Query: 588 SFGFGWGKAFIDSLSGISDSHEIVMLILVFIFAAVHSGMASLRDPGEKLIGARAYRVLFA 409
           S GFG  K FI +++G+S+SHE+VMLIL  IFA  HSG+ASLRD GEKLIG RA+RVLFA
Sbjct: 58  STGFG--KDFIAAVAGVSESHEVVMLILTLIFAIGHSGLASLRDSGEKLIGERAFRVLFA 115

Query: 408 GISLPLAVSTVVYFINHRYDGVQLWQLQSVPWLHEVFWISNFISFLFLYPSTFNLLEVAA 229
           G SLPLAVSTVVYFINHRYDG+QLWQLQSVP +H++ W S+F+SF FLYPSTFNLLEVAA
Sbjct: 116 GTSLPLAVSTVVYFINHRYDGLQLWQLQSVPGIHQLVWFSSFVSFFFLYPSTFNLLEVAA 175

Query: 228 VDEPKMHLWETGIMRITRHPQMVGQVIWCLAHAMWIGNSVAVAASFGLIGHHLFGVWNGD 49
           VD+PKMHLWETGIMRITRHPQMVGQVIWC+AH +WIGNSVAVAAS GLIGHHLFGVWNGD
Sbjct: 176 VDKPKMHLWETGIMRITRHPQMVGQVIWCIAHTVWIGNSVAVAASIGLIGHHLFGVWNGD 235

Query: 48  RRLGLRYGEAFEVVK 4
           RRL  RYGEAF+ V+
Sbjct: 236 RRLASRYGEAFDTVQ 250


>ref|XP_002519613.1| conserved hypothetical protein [Ricinus communis]
           gi|223541203|gb|EEF42758.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 384

 Score =  390 bits (1001), Expect = e-106
 Identities = 191/260 (73%), Positives = 222/260 (85%), Gaps = 2/260 (0%)
 Frame = -3

Query: 777 SRIL-ARTSLEETE-GKSSVVVDEFQLGEDSAFFDIFQQKVSSWVYFTGILGVVLFALDA 604
           SRI+  +TS+ + +   SS V +E  +GEDSA F++ +QK+SSW+YF+ ILGV L+ LD 
Sbjct: 58  SRIIRTQTSIRDADTSSSSSVSEETVVGEDSAAFELGKQKMSSWIYFSVILGVALYVLDV 117

Query: 603 LWIDSSFGFGWGKAFIDSLSGISDSHEIVMLILVFIFAAVHSGMASLRDPGEKLIGARAY 424
            WID+S GFG  K+FI S+S +S+SHE VMLIL+FIFA VHSG+ASLRD GE+LIG RAY
Sbjct: 118 AWIDNSTGFG--KSFIQSVSTLSESHEAVMLILIFIFATVHSGLASLRDKGEELIGERAY 175

Query: 423 RVLFAGISLPLAVSTVVYFINHRYDGVQLWQLQSVPWLHEVFWISNFISFLFLYPSTFNL 244
           RVLFAG+SLPLA+STVVYFINHRYDGVQLWQLQS P +H++ W+ NFISF FLYPSTFNL
Sbjct: 176 RVLFAGVSLPLAMSTVVYFINHRYDGVQLWQLQSAPAVHQLVWLFNFISFFFLYPSTFNL 235

Query: 243 LEVAAVDEPKMHLWETGIMRITRHPQMVGQVIWCLAHAMWIGNSVAVAASFGLIGHHLFG 64
           LEVAAVD+PKMHLWETGIMRITRHPQMVGQVIWCLAH +WIGNSVA  AS GL+GHHLFG
Sbjct: 236 LEVAAVDKPKMHLWETGIMRITRHPQMVGQVIWCLAHTIWIGNSVAAVASIGLVGHHLFG 295

Query: 63  VWNGDRRLGLRYGEAFEVVK 4
           VWNGDRRL  RYGEAFEVVK
Sbjct: 296 VWNGDRRLAKRYGEAFEVVK 315


>ref|XP_003553105.1| PREDICTED: uncharacterized protein LOC100820507 [Glycine max]
          Length = 374

 Score =  389 bits (999), Expect = e-106
 Identities = 187/258 (72%), Positives = 219/258 (84%)
 Frame = -3

Query: 774 RILARTSLEETEGKSSVVVDEFQLGEDSAFFDIFQQKVSSWVYFTGILGVVLFALDALWI 595
           + +ARTS+ E E +S    D   +GEDSA F++ +QK+SSW+YFT ILGVVL  L+  WI
Sbjct: 63  KFVARTSIGENESESESEKDLGLVGEDSAAFELGKQKISSWIYFTAILGVVLCVLNVAWI 122

Query: 594 DSSFGFGWGKAFIDSLSGISDSHEIVMLILVFIFAAVHSGMASLRDPGEKLIGARAYRVL 415
           D+S G+G  KAFID++S +SDSHE+VMLIL+ IFA VHSG+AS R+ GEKLIG R +RV+
Sbjct: 123 DNSTGYG--KAFIDAVSTLSDSHEVVMLILILIFAGVHSGLASFRNTGEKLIGERPFRVI 180

Query: 414 FAGISLPLAVSTVVYFINHRYDGVQLWQLQSVPWLHEVFWISNFISFLFLYPSTFNLLEV 235
           FAGISLPLAVSTVVYFINHRYDG+QLW LQ  P LH++ W+SNFISF FLYPSTFNLLEV
Sbjct: 181 FAGISLPLAVSTVVYFINHRYDGLQLWLLQDAPGLHQLLWLSNFISFFFLYPSTFNLLEV 240

Query: 234 AAVDEPKMHLWETGIMRITRHPQMVGQVIWCLAHAMWIGNSVAVAASFGLIGHHLFGVWN 55
           AAVD+PK+HLWETGI+RITRHPQMVGQVIWCLAH +WIGNSVAVAAS GLI HHLFGVWN
Sbjct: 241 AAVDKPKLHLWETGIIRITRHPQMVGQVIWCLAHTIWIGNSVAVAASIGLIAHHLFGVWN 300

Query: 54  GDRRLGLRYGEAFEVVKS 1
           GDRRL +RYGE FE+VKS
Sbjct: 301 GDRRLAIRYGEDFELVKS 318