BLASTX nr result

ID: Coptis25_contig00018652 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018652
         (1336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270104.1| PREDICTED: short-chain dehydrogenase TIC 32,...   478   e-132
ref|XP_002509816.1| short-chain dehydrogenase, putative [Ricinus...   471   e-130
gb|ACU23411.1| unknown [Glycine max]                                  466   e-129
ref|XP_003525392.1| PREDICTED: WW domain-containing oxidoreducta...   465   e-128
ref|XP_002274932.1| PREDICTED: short-chain dehydrogenase TIC 32,...   463   e-128

>ref|XP_002270104.1| PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic [Vitis
           vinifera] gi|302143828|emb|CBI22689.3| unnamed protein
           product [Vitis vinifera]
          Length = 313

 Score =  478 bits (1230), Expect = e-132
 Identities = 239/312 (76%), Positives = 271/312 (86%)
 Frame = +1

Query: 40  MWFFNKKGPSGFSTSSTAEEVTHGIDGTGLTAIVTGASSGIGAETTRVLSLRGVHVVMAV 219
           MW+F++KGPSGFS SSTAEEVT GIDGTGLTAIVTGASSGIG ETTRVL+LRGVHVVM V
Sbjct: 1   MWWFSRKGPSGFSASSTAEEVTQGIDGTGLTAIVTGASSGIGTETTRVLALRGVHVVMGV 60

Query: 220 RNMDAGSKVKEAIVKENPGAKVDVMELDLSSMASVKKFASEYTSAGLPLNILINNAGIML 399
           RNM AG +VKEAIVKE P AKVD MELDLSSMASV+KFASEY S+GLPLNILINNAGIM 
Sbjct: 61  RNMSAGKEVKEAIVKEIPTAKVDAMELDLSSMASVRKFASEYNSSGLPLNILINNAGIMA 120

Query: 400 TPFMLSKDNIELQFATNYIGHFLLTNLLLETMKKTAQENNVEGRILNLSSEGHRYQRREG 579
            P+MLSKDNIE+QFATN++GHFLLTNLLL+TMKKT +++  EGRI+N+SS  HRY  REG
Sbjct: 121 VPYMLSKDNIEMQFATNHLGHFLLTNLLLDTMKKTTRKSRKEGRIVNVSSMAHRYPYREG 180

Query: 580 IQFDKINDKARYNSLYAYNESKLANVLHANELARRLKEDGVQITANSLHPGVITTDLLRH 759
           I+FDKINDK+ Y+SL+AY +SKLANVLHANELARR KEDGV ITANSLHPG I T+L R 
Sbjct: 181 IRFDKINDKSGYSSLFAYGQSKLANVLHANELARRFKEDGVDITANSLHPGAIVTNLFRC 240

Query: 760 HTIINGIFKTVAKYFVKNVQQGAATTCYVALHPQVKGVSGEYFLDSNKGKPVEQAKDMEL 939
            +I++G+  TV K  +KNVQQGAATTCYVALHPQVKGVSG+YF D N  KP  QAKD EL
Sbjct: 241 SSIVSGLVNTVGKLVLKNVQQGAATTCYVALHPQVKGVSGQYFSDCNIAKPSSQAKDPEL 300

Query: 940 AEKLWDFSMGLI 975
           A+KLW+FSM L+
Sbjct: 301 AKKLWEFSMNLV 312


>ref|XP_002509816.1| short-chain dehydrogenase, putative [Ricinus communis]
           gi|223549715|gb|EEF51203.1| short-chain dehydrogenase,
           putative [Ricinus communis]
          Length = 315

 Score =  471 bits (1213), Expect = e-130
 Identities = 232/313 (74%), Positives = 271/313 (86%)
 Frame = +1

Query: 40  MWFFNKKGPSGFSTSSTAEEVTHGIDGTGLTAIVTGASSGIGAETTRVLSLRGVHVVMAV 219
           MW F  KGPSGFS +STAE+VT GIDGTGLTAIVTGASSGIG ET RVL+LR VHVVMAV
Sbjct: 1   MWIFGWKGPSGFSANSTAEQVTQGIDGTGLTAIVTGASSGIGVETARVLALRDVHVVMAV 60

Query: 220 RNMDAGSKVKEAIVKENPGAKVDVMELDLSSMASVKKFASEYTSAGLPLNILINNAGIML 399
           RN+DAG  VKE+I+KE P AK+DVM+ DLSSMASV+KFASEY S+GLPLN+LINNAG+M 
Sbjct: 61  RNVDAGRNVKESILKEIPTAKIDVMQFDLSSMASVRKFASEYISSGLPLNLLINNAGVMA 120

Query: 400 TPFMLSKDNIELQFATNYIGHFLLTNLLLETMKKTAQENNVEGRILNLSSEGHRYQRREG 579
           TPFMLS+DNIE QFATN++GHFLLT+LLLETMK TA+E++ EGRI+N+SS GHR+  REG
Sbjct: 121 TPFMLSQDNIERQFATNHVGHFLLTDLLLETMKNTARESSREGRIVNVSSAGHRFTYREG 180

Query: 580 IQFDKINDKARYNSLYAYNESKLANVLHANELARRLKEDGVQITANSLHPGVITTDLLRH 759
           I+FDK+ND+A YNS+ AY +SKLAN+LHA ELARRLKEDGV I+ NSLHPG I T+LLR+
Sbjct: 181 IRFDKLNDEAGYNSILAYGQSKLANILHAGELARRLKEDGVDISVNSLHPGAIDTNLLRY 240

Query: 760 HTIINGIFKTVAKYFVKNVQQGAATTCYVALHPQVKGVSGEYFLDSNKGKPVEQAKDMEL 939
           H++INGI   VAKY +KNVQQGAATTCYVALHPQVKGV+GEYF DSN   P  QAKD +L
Sbjct: 241 HSVINGIVSLVAKYVIKNVQQGAATTCYVALHPQVKGVTGEYFSDSNIATPTSQAKDADL 300

Query: 940 AEKLWDFSMGLIN 978
           A++LWDFS+ L N
Sbjct: 301 AKRLWDFSVRLTN 313


>gb|ACU23411.1| unknown [Glycine max]
          Length = 315

 Score =  466 bits (1200), Expect = e-129
 Identities = 230/313 (73%), Positives = 267/313 (85%)
 Frame = +1

Query: 40  MWFFNKKGPSGFSTSSTAEEVTHGIDGTGLTAIVTGASSGIGAETTRVLSLRGVHVVMAV 219
           MWF   KG SGFS SSTAE+VT GIDGT LTAIVTGA+SG+G ETTRVL+LRGVHVVMAV
Sbjct: 1   MWFLGWKGASGFSASSTAEQVTQGIDGTALTAIVTGATSGLGLETTRVLALRGVHVVMAV 60

Query: 220 RNMDAGSKVKEAIVKENPGAKVDVMELDLSSMASVKKFASEYTSAGLPLNILINNAGIML 399
           R++D+G  VKE I+KE P AK+DVMELDLSSMASV+KFA+++ S+GLPLNILINNAG+M 
Sbjct: 61  RSLDSGKNVKETILKEIPSAKIDVMELDLSSMASVRKFAADFNSSGLPLNILINNAGVMA 120

Query: 400 TPFMLSKDNIELQFATNYIGHFLLTNLLLETMKKTAQENNVEGRILNLSSEGHRYQRREG 579
           TPF LS+DNIELQFATN++GHFLLTNLLLETMKKT    N EGRI+ LSSE HR+  REG
Sbjct: 121 TPFTLSQDNIELQFATNHLGHFLLTNLLLETMKKTVGVCNQEGRIVILSSEAHRFAYREG 180

Query: 580 IQFDKINDKARYNSLYAYNESKLANVLHANELARRLKEDGVQITANSLHPGVITTDLLRH 759
           IQFDKIND++ Y+S +AY +SKLAN+LHANELARRLKE+GV+IT NSLHPG I T++LR+
Sbjct: 181 IQFDKINDESGYSSYFAYGQSKLANILHANELARRLKEEGVEITVNSLHPGSIITNILRY 240

Query: 760 HTIINGIFKTVAKYFVKNVQQGAATTCYVALHPQVKGVSGEYFLDSNKGKPVEQAKDMEL 939
           H  IN +   V KYF+KNVQQGAAT CYVALHPQVKG+SGEYF+DSNKG P   AKD EL
Sbjct: 241 HDYINALANMVGKYFLKNVQQGAATQCYVALHPQVKGISGEYFMDSNKGNPASLAKDSEL 300

Query: 940 AEKLWDFSMGLIN 978
           AEKLW+FS+ L N
Sbjct: 301 AEKLWEFSLSLTN 313


>ref|XP_003525392.1| PREDICTED: WW domain-containing oxidoreductase-like isoform 1
           [Glycine max]
          Length = 315

 Score =  465 bits (1196), Expect = e-128
 Identities = 229/313 (73%), Positives = 267/313 (85%)
 Frame = +1

Query: 40  MWFFNKKGPSGFSTSSTAEEVTHGIDGTGLTAIVTGASSGIGAETTRVLSLRGVHVVMAV 219
           MWF   KG SGFS SSTAE+VT GIDGT LTAIVTGA+SG+G ETTRVL+LRGVHVVMAV
Sbjct: 1   MWFLGWKGASGFSASSTAEQVTQGIDGTALTAIVTGATSGLGLETTRVLALRGVHVVMAV 60

Query: 220 RNMDAGSKVKEAIVKENPGAKVDVMELDLSSMASVKKFASEYTSAGLPLNILINNAGIML 399
           R++D+G  VKE I+KE P AK+DVMELDLSSMASV+KFA+++ S+GLPLNILINNAG+M 
Sbjct: 61  RSLDSGKNVKETILKEIPSAKIDVMELDLSSMASVRKFAADFNSSGLPLNILINNAGVMA 120

Query: 400 TPFMLSKDNIELQFATNYIGHFLLTNLLLETMKKTAQENNVEGRILNLSSEGHRYQRREG 579
           TPF LS+DNIELQFATN++GHFLLTNLLLETMKKT    N EGRI+ LSSE HR+  REG
Sbjct: 121 TPFTLSQDNIELQFATNHLGHFLLTNLLLETMKKTVGVCNQEGRIVILSSEAHRFAYREG 180

Query: 580 IQFDKINDKARYNSLYAYNESKLANVLHANELARRLKEDGVQITANSLHPGVITTDLLRH 759
           IQFDKIND++ Y+S +AY +SKLAN+LHANELARRLKE+GV+IT NSLHPG I T++LR+
Sbjct: 181 IQFDKINDESGYSSYFAYGQSKLANILHANELARRLKEEGVEITVNSLHPGSIITNILRY 240

Query: 760 HTIINGIFKTVAKYFVKNVQQGAATTCYVALHPQVKGVSGEYFLDSNKGKPVEQAKDMEL 939
           H  IN +   V KYF+KNVQQGAAT CYVALHPQVKG+SGEYF+DSNKG P   AKD EL
Sbjct: 241 HDYINALANMVGKYFLKNVQQGAATQCYVALHPQVKGISGEYFMDSNKGNPASLAKDSEL 300

Query: 940 AEKLWDFSMGLIN 978
           A+KLW+FS+ L N
Sbjct: 301 AKKLWEFSLSLTN 313


>ref|XP_002274932.1| PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic isoform
           1 [Vitis vinifera] gi|297742509|emb|CBI34658.3| unnamed
           protein product [Vitis vinifera]
          Length = 315

 Score =  463 bits (1192), Expect = e-128
 Identities = 226/311 (72%), Positives = 265/311 (85%)
 Frame = +1

Query: 40  MWFFNKKGPSGFSTSSTAEEVTHGIDGTGLTAIVTGASSGIGAETTRVLSLRGVHVVMAV 219
           MW F +KGPSGFS  STAEEV  GIDG GLTA+VTGASSGIG ET+RVL+L GVHV+MAV
Sbjct: 1   MWIFGRKGPSGFSACSTAEEVAQGIDGNGLTAVVTGASSGIGTETSRVLALHGVHVIMAV 60

Query: 220 RNMDAGSKVKEAIVKENPGAKVDVMELDLSSMASVKKFASEYTSAGLPLNILINNAGIML 399
           RN+DAG  VKE I+KE P AKVDVMELDLSS+ SV+KFASEY S GLPLN+LINNAG+M 
Sbjct: 61  RNVDAGRNVKETILKEIPTAKVDVMELDLSSLPSVRKFASEYKSLGLPLNLLINNAGVMA 120

Query: 400 TPFMLSKDNIELQFATNYIGHFLLTNLLLETMKKTAQENNVEGRILNLSSEGHRYQRREG 579
           TPF+LS DNIELQFATN++GHFLLTNLLLETMK TA+E+  EGRI+N+SSEGHR+   EG
Sbjct: 121 TPFLLSHDNIELQFATNHLGHFLLTNLLLETMKNTARESGREGRIVNVSSEGHRFPYSEG 180

Query: 580 IQFDKINDKARYNSLYAYNESKLANVLHANELARRLKEDGVQITANSLHPGVITTDLLRH 759
           I FDKIND++ YNS+YAY +SKLAN+LHANELA+RL+E+GV+ITANSLHPG I T+LLR+
Sbjct: 181 ICFDKINDESAYNSVYAYGQSKLANILHANELAKRLQEEGVEITANSLHPGAIATNLLRY 240

Query: 760 HTIINGIFKTVAKYFVKNVQQGAATTCYVALHPQVKGVSGEYFLDSNKGKPVEQAKDMEL 939
           H+ ++GI   V KY +KN+ QGAATTCYVALHPQVKGVSGEYF DSN  KP  + KD EL
Sbjct: 241 HSFLDGIVNMVGKYVLKNIPQGAATTCYVALHPQVKGVSGEYFADSNIAKPSSKGKDAEL 300

Query: 940 AEKLWDFSMGL 972
            +KLW+FS+ L
Sbjct: 301 GKKLWEFSISL 311


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