BLASTX nr result

ID: Coptis25_contig00018638 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018638
         (564 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515184.1| multidrug resistance protein 1, 2, putative ...    83   3e-14
ref|XP_003601392.1| ABC transporter B family member [Medicago tr...    82   5e-14
ref|XP_002515185.1| multidrug resistance protein 1, 2, putative ...    80   3e-13
dbj|BAB62040.1| CjMDR1 [Coptis japonica]                               79   4e-13
ref|XP_002515186.1| multidrug resistance protein 1, 2, putative ...    79   4e-13

>ref|XP_002515184.1| multidrug resistance protein 1, 2, putative [Ricinus communis]
            gi|223545664|gb|EEF47168.1| multidrug resistance protein
            1, 2, putative [Ricinus communis]
          Length = 1301

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 38/58 (65%), Positives = 47/58 (81%)
 Frame = +2

Query: 389  MKYEEASGVANDAVRNIRTVFSFCAQENVIALYRNKCQAPKKAGIKLGLITRVGFGLS 562
            M YEEAS VANDAV +IRTV SFCA+E V+ LY  KC+ PKK G++LGLI+ +GFG+S
Sbjct: 909  MMYEEASQVANDAVGSIRTVASFCAEEKVMQLYEKKCEGPKKTGVRLGLISGIGFGMS 966


>ref|XP_003601392.1| ABC transporter B family member [Medicago truncatula]
            gi|355490440|gb|AES71643.1| ABC transporter B family
            member [Medicago truncatula]
          Length = 1310

 Score = 82.4 bits (202), Expect = 5e-14
 Identities = 40/56 (71%), Positives = 47/56 (83%)
 Frame = +2

Query: 395  YEEASGVANDAVRNIRTVFSFCAQENVIALYRNKCQAPKKAGIKLGLITRVGFGLS 562
            YEEAS VANDAV NIRTV SFCA+E V+ LY+ KC+AP KAGIK G+I+ VGFG+S
Sbjct: 926  YEEASQVANDAVSNIRTVASFCAEEKVMDLYQKKCEAPIKAGIKQGIISGVGFGMS 981


>ref|XP_002515185.1| multidrug resistance protein 1, 2, putative [Ricinus communis]
            gi|223545665|gb|EEF47169.1| multidrug resistance protein
            1, 2, putative [Ricinus communis]
          Length = 1292

 Score = 79.7 bits (195), Expect = 3e-13
 Identities = 38/58 (65%), Positives = 46/58 (79%)
 Frame = +2

Query: 389  MKYEEASGVANDAVRNIRTVFSFCAQENVIALYRNKCQAPKKAGIKLGLITRVGFGLS 562
            M YEEAS VANDAV +IRTV SFCA+E V+ LYR KC+ P K GI+ GLI+ +GFG+S
Sbjct: 900  MMYEEASQVANDAVGSIRTVASFCAEEKVMQLYRKKCEGPLKTGIRQGLISGIGFGVS 957


>dbj|BAB62040.1| CjMDR1 [Coptis japonica]
          Length = 1289

 Score = 79.3 bits (194), Expect = 4e-13
 Identities = 37/58 (63%), Positives = 46/58 (79%)
 Frame = +2

Query: 389  MKYEEASGVANDAVRNIRTVFSFCAQENVIALYRNKCQAPKKAGIKLGLITRVGFGLS 562
            M YEEAS VANDAV +IRTV SFCA+E V+ LY+ KC+ P K GI+ GLI+ +GFG+S
Sbjct: 899  MMYEEASQVANDAVGSIRTVASFCAEEKVMQLYKKKCEGPMKTGIRQGLISGIGFGIS 956


>ref|XP_002515186.1| multidrug resistance protein 1, 2, putative [Ricinus communis]
            gi|223545666|gb|EEF47170.1| multidrug resistance protein
            1, 2, putative [Ricinus communis]
          Length = 1292

 Score = 79.3 bits (194), Expect = 4e-13
 Identities = 37/58 (63%), Positives = 46/58 (79%)
 Frame = +2

Query: 389  MKYEEASGVANDAVRNIRTVFSFCAQENVIALYRNKCQAPKKAGIKLGLITRVGFGLS 562
            M YEEAS VANDAV +IRTV SFCA+E V+ LYR KC+ P K GI+ GL++ +GFG+S
Sbjct: 900  MMYEEASQVANDAVGSIRTVASFCAEEKVMQLYRKKCEGPLKTGIRQGLVSGIGFGVS 957


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